Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.5e-47 192.6 102 100.0
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 3.8e-27 124.8 99 68.7
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 1.2e-25 119.8 99 65.7
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 4.7e-25 117.9 99 64.6
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.7e-25 117.9 99 64.6
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.7e-25 117.9 99 64.6
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 4.7e-25 117.9 99 64.6
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 4.7e-25 117.9 99 65.7
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.8e-24 115.9 99 63.6
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 1.8e-24 115.9 99 65.7
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 2.3e-24 115.5 99 64.6
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 8.9e-24 113.6 99 62.6
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.5e-23 112.8 99 60.6
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.6e-23 112.1 104 57.7
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 4.4e-23 111.3 96 58.3
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 5.7e-23 110.9 99 59.6
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 7.5e-23 110.5 99 62.6
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 7.5e-23 110.5 73 72.6
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 9.8e-23 110.2 99 62.6
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 1.3e-22 109.8 71 74.6
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 1.1e-21 106.7 103 61.2
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 2.4e-21 105.5 101 57.4
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 3.1e-21 105.1 104 54.8
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 3.1e-21 105.1 73 68.5
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 4.1e-21 104.8 96 57.3
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 5.4e-21 104.4 99 54.5
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 7.0e-21 104.0 101 56.4
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 7.0e-21 104.0 101 56.4
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 1.6e-20 102.8 105 55.2
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 2.0e-20 102.4 73 67.1
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.7e-20 102.1 73 64.4
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.7e-20 102.1 73 64.4
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 2.7e-20 102.1 100 56.0
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 2.7e-20 102.1 100 57.0
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 4.5e-20 101.3 101 60.4
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 5.9e-20 100.9 96 56.2
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 5.9e-20 100.9 74 63.5
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 7.8e-20 100.5 73 64.4
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 1.3e-19 99.8 71 71.8
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 1.7e-19 99.4 101 55.4
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 2.3e-19 99.0 89 57.3
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 2.9e-19 98.6 83 61.4
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 6.6e-19 97.4 104 53.8
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 8.6e-19 97.1 73 69.9
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 1.5e-18 96.3 77 59.7
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.9e-18 95.9 69 63.8
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 2.5e-18 95.5 101 52.5
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 2.5e-18 95.5 87 59.8
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.5e-18 95.5 102 53.9
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 4.3e-18 94.7 102 55.9
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 4.3e-18 94.7 101 58.4
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 5.6e-18 94.4 92 57.6
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 7.3e-18 94.0 106 51.9
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 1.2e-17 93.2 102 52.0
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 2.8e-17 92.0 95 53.7
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 3.6e-17 91.7 101 52.5
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 4.7e-17 91.3 103 52.4
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 4.7e-17 91.3 103 52.4
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 6.1e-17 90.9 103 52.4
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 6.1e-17 90.9 102 53.9
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 8.0e-17 90.5 101 51.5
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 1.0e-16 90.1 83 59.0
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.4e-16 89.7 102 50.0
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 2.3e-16 89.0 101 50.5
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 5.2e-16 87.8 101 49.5
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.2e-15 86.7 74 58.1
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 1.5e-15 86.3 102 52.0
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 2.0e-15 85.9 100 49.0
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 2.0e-15 85.9 74 58.1
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 4.4e-15 84.7 95 51.6
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 5.8e-15 84.3 103 48.5
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 5.8e-15 84.3 95 51.6
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 5.8e-15 84.3 90 53.3
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 7.5e-15 84.0 75 58.7
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.2e-14 82.4 105 49.5
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 2.9e-14 82.0 103 52.4
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 3.7e-14 81.6 103 52.4
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 4.9e-14 81.3 101 47.5
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 1.8e-13 79.3 102 44.1
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.8e-13 79.3 110 44.5
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 2.4e-13 79.0 103 51.5
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 2.4e-13 79.0 101 48.5
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 2.4e-13 79.0 109 45.0
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 7.0e-13 77.4 103 50.5
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 7.0e-13 77.4 99 46.5
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.7e-12 75.5 68 63.2
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 2.7e-12 75.5 68 63.2
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 1.9e-10 69.3 76 50.0
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 3.3e-10 68.6 53 60.4
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 7.3e-10 67.4 70 51.4
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 9.5e-10 67.0 71 47.9
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 1.6e-09 66.2 82 43.9
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 3.6e-09 65.1 52 61.5
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 2.3e-08 62.4 71 39.4
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 2.3e-08 62.4 51 54.9
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 5.2e-08 61.2 57 59.6
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 6.8e-08 60.8 114 37.7
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 1.5e-07 59.7 76 47.4
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 2.9e-06 55.5 70 48.6
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 3.7e-06 55.1 102 42.2


User provided reference genes

Program Settings