Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 7.9e-121 437.2 232 100.0
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 9.2e-85 317.4 232 74.1
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 3.9e-83 312.0 231 73.6
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 6.6e-83 311.2 233 75.1
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 7.0e-77 291.2 233 70.0
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.6e-73 280.0 239 62.3
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 3.6e-73 278.9 237 64.1
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 3.1e-72 275.8 238 61.8
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 6.4e-70 268.1 233 62.7
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.0e-67 260.8 237 58.6
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.3e-67 259.6 237 59.9
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 1.1e-66 257.3 237 59.1
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 9.5e-66 254.2 233 63.1
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.8e-65 252.7 244 59.8
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.8e-65 252.7 237 57.8
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.0e-63 246.5 237 56.1
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 2.2e-62 243.0 231 61.9
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.4e-61 239.6 238 55.5
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.1e-58 230.7 233 59.2
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.1e-58 230.7 233 59.2
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.9e-58 229.9 246 57.3
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 1.9e-58 229.9 239 54.0
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 5.6e-58 228.4 234 57.3
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 2.1e-57 226.5 215 56.3
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 1.1e-56 224.2 237 54.0
Haze_16205 Corylus avellana HOM05D005772 ORTHO05D006468 3.4e-55 219.2 184 67.4
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 2.2e-54 216.5 245 56.7
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 3.8e-54 215.7 231 54.5
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.9e-54 215.3 233 58.8
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 1.1e-53 214.2 229 55.0
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.4e-53 213.8 236 51.7
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 3.0e-51 206.1 140 70.0
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.9e-50 203.4 234 53.4
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.5e-50 203.0 122 74.6
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.5e-47 193.7 165 60.6
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 2.6e-47 193.0 174 54.6
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 7.9e-44 181.4 235 48.5
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 3.3e-42 176.0 173 55.5
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 2.4e-40 169.9 305 40.7
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 1.2e-36 157.5 220 42.7
QL06p047014 Quercus lobata HOM05D001071 ORTHO05D006468 2.7e-36 156.4 133 67.7
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.3e-35 153.3 219 42.5
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 2.8e-33 146.4 209 43.1
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.7e-33 146.0 269 39.8
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 4.8e-33 145.6 217 41.9
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 1.4e-32 144.1 147 52.4
Atru.chr1.2602 Acer truncatum HOM05D005772 ORTHO05D006468 1.8e-32 143.7 158 54.4
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 5.3e-32 142.1 131 53.4
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 1.2e-31 141.0 219 41.1
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 1.2e-31 141.0 217 41.9
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 4.5e-31 139.0 146 58.2
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 8.4e-30 134.8 219 42.0
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 8.4e-30 134.8 219 42.0
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.4e-29 134.0 148 50.7
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 1.9e-29 133.7 217 40.1
MD04G1024400 Malus domestica HOM05D005772 ORTHO05D006468 6.0e-28 128.6 102 62.7
Eucgr.A00749 Eucalyptus grandis HOM05D005772 ORTHO05D006468 7.9e-28 128.3 167 53.3
Dinv20324 Davidia involucrata HOM05D005772 ORTHO05D006468 6.7e-27 125.2 237 41.8
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.5e-26 123.2 179 43.0
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 5.7e-26 122.1 203 39.9
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 2.2e-25 120.2 205 36.6
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.7e-25 119.4 106 53.8
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 4.1e-24 115.9 142 47.2
Duzib192G0394 Durio zibethinus HOM05D005772 ORTHO05D006468 5.3e-24 115.5 158 46.2
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 4.5e-23 112.5 144 41.7
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 7.6e-23 111.7 173 38.7
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.8e-22 109.4 170 41.2
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 8.5e-22 108.2 144 40.3
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.1e-21 107.8 146 43.2
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.4e-21 107.5 226 34.1
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.5e-21 106.7 237 33.3
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 2.5e-21 106.7 183 40.4
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 4.2e-21 105.9 175 40.0
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 4.2e-21 105.9 178 38.2
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 4.2e-21 105.9 189 37.6
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 5.5e-21 105.5 138 42.0
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 7.2e-21 105.1 144 38.9
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 7.2e-21 105.1 183 39.9
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 1.2e-20 104.4 171 37.4
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.6e-20 104.0 165 39.4
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 2.1e-20 103.6 233 33.9
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 3.6e-20 102.8 205 35.1
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 4.6e-20 102.4 184 37.5
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 6.1e-20 102.1 178 38.2
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.4e-19 100.9 182 34.6
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 2.3e-19 100.1 189 37.6
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 3.0e-19 99.8 212 34.0
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 3.9e-19 99.4 184 37.0
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 3.9e-19 99.4 191 34.6
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 5.1e-19 99.0 184 35.3
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 6.7e-19 98.6 148 43.9
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 8.8e-19 98.2 168 39.9
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 1.9e-18 97.1 164 39.6
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 3.3e-18 96.3 117 42.7
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 5.7e-18 95.5 177 36.7
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 7.4e-18 95.1 234 31.2
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 3.7e-17 92.8 184 35.9
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 4.8e-17 92.4 226 30.5
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.8e-16 90.5 140 37.1
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 1.8e-16 90.5 193 33.2
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 4.1e-16 89.4 118 39.0
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.2e-15 87.8 118 38.1
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 1.2e-15 87.8 188 33.5
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 3.4e-15 86.3 161 32.9
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.5e-15 85.9 167 38.3
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.0e-14 84.7 118 36.4
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 1.3e-14 84.3 184 35.9
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 1.3e-14 84.3 230 26.1
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 6.5e-14 82.0 236 28.0
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 1.1e-13 81.3 119 33.6
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 1.4e-13 80.9 103 37.9
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.9e-13 80.5 181 32.6
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.2e-12 77.8 118 34.7
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 1.6e-12 77.4 161 33.5
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.6e-12 77.4 158 36.1
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 7.9e-12 75.1 229 27.5
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 7.9e-12 75.1 198 29.3
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 1.4e-11 74.3 184 29.3
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 1.1e-10 71.2 102 36.3
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 1.5e-10 70.9 135 35.6
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 2.0e-10 70.5 145 37.9
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 3.3e-10 69.7 141 31.2
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.7e-09 67.4 82 42.7
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 2.2e-09 67.0 84 36.9
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 6.3e-09 65.5 143 35.0
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 8.2e-09 65.1 75 46.7
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 1.4e-08 64.3 84 35.7
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 3.1e-08 63.2 75 46.7
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 7.0e-08 62.0 125 37.6
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 4.5e-07 59.3 117 35.0
ATR0618G111 Amborella trichopoda HOM05D005772 ORTHO05D006468 2.2e-06 57.0 91 44.0
QL10p063736 Quercus lobata HOM05D001309 ORTHO05D022844 2.9e-06 56.6 32 81.2
QL10p063927 Quercus lobata HOM05D000344 ORTHO05D022844 2.9e-06 56.6 32 81.2


User provided reference genes

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