Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.3e-152 543.1 286 100.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 1.3e-128 463.4 280 85.7
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 4.5e-126 454.9 277 85.2
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 2.9e-120 435.6 281 79.7
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 4.9e-120 434.9 273 83.5
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 7.8e-118 427.6 276 79.7
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.0e-117 427.2 276 79.3
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.3e-117 426.0 276 80.1
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.0e-117 425.6 276 79.3
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 3.0e-117 425.6 275 79.6
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.3e-116 422.2 276 79.0
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.6e-115 419.9 275 79.6
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 3.6e-115 418.7 279 76.7
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.5e-113 413.3 282 77.3
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 2.0e-113 412.9 264 80.7
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 2.2e-112 409.5 275 77.1
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 3.2e-111 405.6 277 78.0
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 4.1e-111 405.2 281 75.4
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 4.1e-111 405.2 278 75.2
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 7.0e-111 404.4 275 73.8
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.0e-110 402.9 272 77.6
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 2.0e-110 402.9 268 75.7
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 2.0e-110 402.9 278 75.5
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 2.7e-110 402.5 274 76.3
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.3e-109 400.2 278 75.9
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.3e-109 400.2 272 76.8
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 2.3e-109 399.4 272 76.8
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.0e-109 399.1 283 73.9
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 8.6e-109 397.5 278 74.1
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 4.3e-108 395.2 274 72.6
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 5.6e-108 394.8 278 70.9
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 7.3e-108 394.4 285 71.9
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 7.3e-108 394.4 283 72.1
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.1e-107 392.9 274 71.9
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 3.6e-107 392.1 282 72.3
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 4.7e-107 391.7 264 76.5
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 6.2e-107 391.3 272 75.0
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 8.1e-107 391.0 270 73.0
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.8e-106 389.8 270 72.6
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.8e-106 389.8 272 74.6
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.8e-106 389.8 268 75.0
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 4.0e-106 388.7 270 73.0
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 4.0e-106 388.7 272 74.3
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 5.2e-106 388.3 269 72.5
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 2.6e-105 386.0 270 71.1
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.4e-105 385.2 272 73.5
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 4.4e-105 385.2 286 73.1
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 5.8e-105 384.8 269 72.1
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 5.8e-105 384.8 269 72.1
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 5.8e-105 384.8 268 75.7
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 7.5e-105 384.4 282 71.3
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 9.8e-105 384.0 270 71.9
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 2.9e-104 382.5 269 72.5
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 3.7e-104 382.1 266 74.4
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 8.3e-104 380.9 269 71.7
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 5.4e-103 378.3 279 71.3
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 7.1e-103 377.9 341 62.8
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.2e-102 377.1 272 73.2
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 2.1e-102 376.3 274 71.9
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 3.5e-102 375.6 288 70.8
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 7.8e-102 374.4 284 70.8
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 3.0e-101 372.5 240 80.8
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 3.9e-101 372.1 268 70.5
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 5.1e-101 371.7 288 70.1
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 5.1e-101 371.7 278 69.1
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.1e-100 370.5 278 69.4
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.5e-100 370.2 269 69.9
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 2.5e-100 369.4 275 70.2
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 7.3e-100 367.9 265 73.2
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 7.3e-100 367.9 268 72.0
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.2e-99 367.1 267 74.5
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 3.6e-99 365.5 278 70.9
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.8e-98 363.2 265 73.2
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 2.3e-98 362.8 265 72.5
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 8.9e-98 360.9 268 70.5
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 8.9e-98 360.9 280 69.6
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 7.6e-97 357.8 277 68.6
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 8.4e-96 354.4 241 78.0
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 2.4e-95 352.8 270 70.4
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 3.2e-95 352.4 300 63.7
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 3.5e-94 349.0 264 70.1
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 3.5e-94 349.0 268 66.8
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 6.0e-94 348.2 280 67.5
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 7.8e-94 347.8 274 68.6
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 2.3e-93 346.3 234 75.6
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.6e-91 340.1 262 69.1
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 6.2e-91 338.2 225 79.1
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 9.9e-89 330.9 270 63.3
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 1.3e-88 330.5 267 63.3
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 6.4e-88 328.2 264 64.4
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.5e-86 322.4 276 63.0
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 4.6e-86 322.0 263 62.0
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.0e-85 320.9 276 63.0
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 9.6e-84 314.3 237 70.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.3e-83 313.9 242 67.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 6.2e-83 311.6 238 69.3
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 3.1e-82 309.3 256 62.1
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 9.9e-81 304.3 222 71.2
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 1.4e-79 300.4 391 45.8
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 1.9e-79 300.1 266 61.3
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.6e-78 297.0 283 58.7
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 3.2e-71 272.7 238 62.6
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.3e-68 262.7 268 54.5
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.1e-66 257.7 264 53.0
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 7.4e-60 235.0 149 81.9
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.9e-53 212.6 196 62.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.1e-50 204.5 220 55.0
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.4e-50 204.1 152 68.4
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 1.5e-49 200.7 183 63.9
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 2.6e-44 183.3 156 61.5
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.7e-43 180.6 217 49.8
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 5.9e-41 172.2 133 59.4
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 3.8e-40 169.5 118 75.4
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 1.2e-38 164.5 135 68.1
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.7e-32 144.1 154 56.5
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 3.6e-30 136.3 119 62.2
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 4.7e-30 136.0 203 45.3
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.4e-29 134.4 133 63.9
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 9.4e-23 111.7 77 76.6
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.6e-22 109.8 78 74.4
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 2.2e-19 100.5 257 30.0
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.8e-13 80.9 108 46.3
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 5.4e-10 69.3 48 68.8


User provided reference genes

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