Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G202600 Carya illinoinensis HOM05D004037 ORTHO05D004744 1.2e-186 656.4 332 100.0
Haze_11114 Corylus avellana HOM05D004037 ORTHO05D004744 1.2e-149 533.5 330 82.7
QL10p064641 Quercus lobata HOM05D004037 ORTHO05D004744 4.6e-146 521.5 332 80.4
QL10p065764 Quercus lobata HOM05D004037 ORTHO05D004744 1.0e-145 520.4 332 80.1
ClCG09G010780 Citrullus lanatus HOM05D004037 ORTHO05D004744 2.4e-142 509.2 298 82.9
MELO3C013171.2 Cucumis melo HOM05D004037 ORTHO05D004744 6.4e-140 501.1 307 80.5
CsaV3_7G021780 Cucumis sativus L. HOM05D004037 ORTHO05D004744 1.1e-139 500.4 307 80.5
Duzib093G0613 Durio zibethinus HOM05D004037 ORTHO05D004744 1.1e-139 500.4 326 74.5
Cfa008527 Carpinus fangiana HOM05D004037 ORTHO05D004744 4.2e-139 498.4 330 77.6
Sed0020358 Sechium edule HOM05D004037 ORTHO05D004744 4.2e-139 498.4 326 77.3
Sed0007542 Sechium edule HOM05D004037 ORTHO05D004744 1.6e-138 496.5 298 80.5
Atru.chr12.1746 Acer truncatum HOM05D004037 ORTHO05D004744 6.0e-138 494.6 335 73.7
COL.COLO4_19183 Corchorus olitorius HOM05D004037 ORTHO05D004744 2.3e-137 492.7 321 76.0
Thecc.05G172500 Theobroma cacao HOM05D004037 ORTHO05D004744 6.6e-137 491.1 326 75.2
Gorai.001G202100 Gossypium raimondii HOM05D004037 ORTHO05D004744 1.3e-135 486.9 329 73.9
Thecc.01G117800 Theobroma cacao HOM05D004037 ORTHO05D004744 1.6e-135 486.5 299 79.6
TWI63G1426 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 2.1e-135 486.1 308 77.6
PGR042G3458 Punica granatum HOM05D004037 ORTHO05D004744 2.8e-135 485.7 326 74.5
Gohir.A11G301700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 3.6e-135 485.3 299 78.6
Ciclev10020914m.g Citrus clementina HOM05D004037 ORTHO05D004744 4.8e-135 485.0 337 74.5
Gohir.A07G173900 Gossypium hirsutum HOM05D004037 ORTHO05D004744 4.8e-135 485.0 326 73.9
Gorai.007G347100 Gossypium raimondii HOM05D004037 ORTHO05D004744 4.8e-135 485.0 299 78.3
Gohir.D07G181200 Gossypium hirsutum HOM05D004037 ORTHO05D004744 6.2e-135 484.6 329 73.3
Actinidia39245 Actinidia chinensis HOM05D004037 ORTHO05D004744 1.1e-134 483.8 311 76.5
Lj3g0014190 Lotus japonicus HOM05D004037 ORTHO05D004744 1.1e-134 483.8 330 72.7
THA.LOC104804380 Tarenaya hassleriana HOM05D004037 ORTHO05D004744 1.1e-134 483.8 310 77.1
MD15G1142500 Malus domestica HOM05D004037 ORTHO05D004744 1.4e-134 483.4 300 78.3
Manes.05G207900 Manihot esculenta HOM05D004037 ORTHO05D004744 3.1e-134 482.3 318 74.5
TPR.G5068 Trifolium pratense HOM05D004037 ORTHO05D004744 3.1e-134 482.3 335 72.2
Medtr8g028145 Medicago truncatula HOM05D004037 ORTHO05D004744 4.0e-134 481.9 329 72.9
Prupe.6G152500 Prunus persica HOM05D004037 ORTHO05D004744 4.0e-134 481.9 306 76.8
TWI34G0723 Tripterygium wilfordii HOM05D004037 ORTHO05D004744 5.3e-134 481.5 332 72.9
Hma1.2p1_0150F.1_g066850 Hydrangea macrophylla HOM05D004037 ORTHO05D004744 6.9e-134 481.1 326 73.3
Glyma.07G060300 Glycine max HOM05D004037 ORTHO05D004744 9.0e-134 480.7 329 72.0
Glyma.16G028900 Glycine max HOM05D004037 ORTHO05D004744 9.0e-134 480.7 329 72.3
Phvul.001G003100 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 9.0e-134 480.7 328 71.0
RcHm_v2.0_Chr2g0084421 Rosa chinensis HOM05D004037 ORTHO05D004744 9.0e-134 480.7 327 74.0
CANSAT01G0494 Cannabis sativa HOM05D004037 ORTHO05D004744 2.6e-133 479.2 323 75.2
VMungo1383G1316 Vigna mungo HOM05D004037 ORTHO05D004744 2.6e-133 479.2 326 71.5
GSVIVG01038260001 Vitis vinifera HOM05D004037 ORTHO05D004744 4.5e-133 478.4 306 77.5
Nn3g17600 Nelumbo nucifera HOM05D004037 ORTHO05D004744 5.8e-133 478.0 305 76.4
Duzib128G0968 Durio zibethinus HOM05D004037 ORTHO05D004744 9.9e-133 477.2 313 75.1
FvH4_2g00280 Fragaria vesca HOM05D004037 ORTHO05D004744 9.9e-133 477.2 316 75.3
Gohir.D11G316700 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.3e-132 476.9 294 78.2
Phvul.010G108900 Phaseolus vulgaris HOM05D004037 ORTHO05D004744 6.4e-132 474.6 326 71.5
RcHm_v2.0_Chr2g0126841 Rosa chinensis HOM05D004037 ORTHO05D004744 8.4e-132 474.2 324 72.5
AL5G42050 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 1.1e-131 473.8 300 77.0
Aa31LG10G14130 Aethionema arabicum HOM05D004037 ORTHO05D004744 1.4e-131 473.4 301 76.1
Ca_23565_v3 Cicer arietinum L. HOM05D004037 ORTHO05D004744 1.4e-131 473.4 329 71.7
Prupe.7G270700 Prunus persica HOM05D004037 ORTHO05D004744 1.4e-131 473.4 289 79.2
Sp4g26120 Schrenkiella parvula HOM05D004037 ORTHO05D004744 1.4e-131 473.4 310 74.5
Lju470A2T32 Lonicera japonica HOM05D004037 ORTHO05D004744 1.9e-131 473.0 322 74.2
Carub.0004s2659 Capsella rubella HOM05D004037 ORTHO05D004744 2.4e-131 472.6 300 76.0
Aqoxy2G03110 Aquilegia oxysepala HOM05D004037 ORTHO05D004744 4.2e-131 471.9 280 81.1
Thhalv10006083m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 4.2e-131 471.9 300 76.7
FAN19G0379 Fragaria x ananassa HOM05D004037 ORTHO05D004744 4.2e-131 471.9 297 78.5
AT3G59890 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 5.4e-131 471.5 301 75.4
CARHR139200 Cardamine hirsuta HOM05D004037 ORTHO05D004744 5.4e-131 471.5 316 74.1
CARHR170220 Cardamine hirsuta HOM05D004037 ORTHO05D004744 7.1e-131 471.1 276 81.5
AT2G44040 Arabidopsis thaliana HOM05D004037 ORTHO05D004744 9.3e-131 470.7 300 76.3
Sc06g0007930 Simmondsia chinensis HOM05D004037 ORTHO05D004744 9.3e-131 470.7 303 76.2
Ah.06g182910 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.2e-130 470.3 305 75.4
AL4G42910 Arabidopsis lyrata HOM05D004037 ORTHO05D004744 1.2e-130 470.3 300 76.0
Ah.04g165670 Amaranthus hybridus HOM05D004037 ORTHO05D004744 1.6e-130 469.9 301 74.8
Thhalv10001534m.g Eutrema salsugineum HOM05D004037 ORTHO05D004744 1.6e-130 469.9 310 74.2
BolC3t15285H Brassica oleracea HOM05D004037 ORTHO05D004744 2.7e-130 469.2 300 75.7
C03p29380 Brassica napus HOM05D004037 ORTHO05D004744 3.5e-130 468.8 316 72.8
AUR62016240 Chenopodium quinoa HOM05D004037 ORTHO05D004744 3.5e-130 468.8 322 73.6
A03p24640 Brassica napus HOM05D004037 ORTHO05D004744 4.6e-130 468.4 316 73.1
BraA03t11670Z Brassica rapa HOM05D004037 ORTHO05D004744 4.6e-130 468.4 316 73.1
PGSC0003DMG400028592 Solanum tuberosum HOM05D004037 ORTHO05D004744 6.0e-130 468.0 320 71.6
Hund02101 Selenicereus undatus HOM05D004037 ORTHO05D004744 7.9e-130 467.6 318 73.0
TAR636G3090 Trochodendron aralioides HOM05D004037 ORTHO05D004744 7.9e-130 467.6 299 75.9
Aa31LG1G25710 Aethionema arabicum HOM05D004037 ORTHO05D004744 1.0e-129 467.2 309 73.8
A04p33160 Brassica napus HOM05D004037 ORTHO05D004744 1.0e-129 467.2 276 80.4
Gohir.D11G317300 Gossypium hirsutum HOM05D004037 ORTHO05D004744 1.0e-129 467.2 292 77.4
Nitab4.5_0000245g0260 Nicotiana tabacum HOM05D004037 ORTHO05D004744 1.3e-129 466.8 306 74.8
AUR62032781 Chenopodium quinoa HOM05D004037 ORTHO05D004744 1.8e-129 466.5 320 73.1
BcaC01g05190 Brassica carinata HOM05D004037 ORTHO05D004744 2.3e-129 466.1 316 72.5
Carub.0005s2663 Capsella rubella HOM05D004037 ORTHO05D004744 2.3e-129 466.1 300 76.0
Solyc01g098380.4 Solanum lycopersicum HOM05D004037 ORTHO05D004744 2.3e-129 466.1 320 71.6
FAN24G1991 Fragaria x ananassa HOM05D004037 ORTHO05D004744 3.0e-129 465.7 283 80.2
MBI18_g24142_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 3.9e-129 465.3 292 76.4
Cc03_g11000 Coffea canephora HOM05D004037 ORTHO05D004744 8.7e-129 464.2 309 75.4
BraA04t18775Z Brassica rapa HOM05D004037 ORTHO05D004744 1.1e-128 463.8 286 78.0
arahy.Tifrunner.gnm1.ann1.FPGW6Q Arachis hypogaea HOM05D004037 ORTHO05D004744 1.9e-128 463.0 313 74.1
Actinidia14627 Actinidia chinensis HOM05D004037 ORTHO05D004744 2.5e-128 462.6 325 70.8
Lalb_Chr10g0100171 Lupinus albus HOM05D004037 ORTHO05D004744 2.5e-128 462.6 311 74.0
BolC4t28586H Brassica oleracea HOM05D004037 ORTHO05D004744 4.3e-128 461.8 315 72.4
Psat4g089800 Pisum sativum HOM05D004037 ORTHO05D004744 4.3e-128 461.8 329 71.1
arahy.Tifrunner.gnm1.ann1.X3ZCQR Arachis hypogaea HOM05D004037 ORTHO05D004744 5.6e-128 461.5 313 73.8
BcaB01g03335 Brassica carinata HOM05D004037 ORTHO05D004744 7.4e-128 461.1 316 71.2
Hund23277 Selenicereus undatus HOM05D004037 ORTHO05D004744 1.6e-127 459.9 323 69.3
C04p70860 Brassica napus HOM05D004037 ORTHO05D004744 2.1e-127 459.5 315 72.1
Migut.M01184 Erythranthe guttata HOM05D004037 ORTHO05D004744 2.8e-127 459.1 314 72.9
CAN.G134.227 Capsicum annuum HOM05D004037 ORTHO05D004744 6.2e-127 458.0 303 74.9
vmacro05805 Vaccinium macrocarpon HOM05D004037 ORTHO05D004744 6.2e-127 458.0 272 81.6
PSO541G3258 Papaver somniferum HOM05D004037 ORTHO05D004744 1.8e-126 456.4 301 75.4
BcaB06g29352 Brassica carinata HOM05D004037 ORTHO05D004744 2.4e-126 456.1 312 73.1
HanXRQChr02g0032821 Helianthus annuus HOM05D004037 ORTHO05D004744 2.4e-126 456.1 330 68.5
Migut.M00539 Erythranthe guttata HOM05D004037 ORTHO05D004744 1.2e-125 453.8 314 72.3
Lsat_1_v5_gn_3_17660 Lactuca sativa HOM05D004037 ORTHO05D004744 1.2e-125 453.8 326 68.4
PSO675G6334 Papaver somniferum HOM05D004037 ORTHO05D004744 1.5e-125 453.4 301 74.1
EL10Ac2g02395 Beta vulgaris HOM05D004037 ORTHO05D004744 2.6e-125 452.6 304 72.0
ECA246G0926 Erigeron canadensis HOM05D004037 ORTHO05D004744 9.9e-125 450.7 308 71.8
EL10Ac6g13735 Beta vulgaris HOM05D004037 ORTHO05D004744 2.9e-124 449.1 274 78.1
DCAR_002599 Daucus carota HOM05D004037 ORTHO05D004744 6.4e-124 448.0 307 71.3
Cpa.g.sc182.24 Carica papaya HOM05D004037 ORTHO05D004744 1.1e-123 447.2 294 73.8
CDE02G2837 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 1.1e-123 447.2 327 69.7
Peaxi162Scf00071g00719 Petunia axillaris HOM05D004037 ORTHO05D004744 2.4e-123 446.0 265 80.8
HPP92_022643 Vanilla planifolia HOM05D004037 ORTHO05D004744 5.5e-123 444.9 325 68.0
Potri.017G001900 Populus trichocarpa HOM05D004037 ORTHO05D004744 2.7e-122 442.6 277 76.9
CDE05G0441 Ceratophyllum demersum HOM05D004037 ORTHO05D004744 7.9e-122 441.0 272 77.9
MSTRG.7308 Avicennia marina HOM05D004037 ORTHO05D004744 3.9e-121 438.7 305 72.1
Oeu016121.2 Olea europaea HOM05D004037 ORTHO05D004744 5.1e-121 438.3 272 77.2
PSO339G4618 Papaver somniferum HOM05D004037 ORTHO05D004744 5.6e-120 434.9 324 66.4
CSS0028639 Camellia sinensis var. sinensis HOM05D004037 ORTHO05D004744 9.6e-120 434.1 315 67.0
BcaC02g07140 Brassica carinata HOM05D004037 ORTHO05D004744 2.8e-119 432.6 276 77.2
PSO384G4791 Papaver somniferum HOM05D004037 ORTHO05D004744 3.1e-118 429.1 324 66.0
AUR62028616 Chenopodium quinoa HOM05D004037 ORTHO05D004744 4.0e-118 428.7 302 70.2
Potri.007G145900 Populus trichocarpa HOM05D004037 ORTHO05D004744 1.5e-117 426.8 279 72.4
AUR62032340 Chenopodium quinoa HOM05D004037 ORTHO05D004744 2.2e-116 422.9 283 72.8
ATR0743G110 Amborella trichopoda HOM05D004037 ORTHO05D004744 8.4e-116 421.0 278 71.2
Lj6C283G4 Lonicera japonica HOM05D004037 ORTHO05D004744 7.1e-115 417.9 293 72.7
Os02g0436400 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 2.3e-113 412.9 307 65.8
Os03g0245100 Oryza sativa ssp. japonica HOM05D004037 ORTHO05D004744 1.1e-112 410.6 299 65.6
Sabra17G0005900 Salix brachista HOM05D004037 ORTHO05D004744 1.9e-112 409.8 343 61.2
HanXRQChr05g0133541 Helianthus annuus HOM05D004037 ORTHO05D004744 7.4e-112 407.9 322 64.3
BcaB06g29511 Brassica carinata HOM05D004037 ORTHO05D004744 1.3e-111 407.1 270 74.4
Zm00001eb176170 Zea mays HOM05D004037 ORTHO05D004744 1.3e-111 407.1 278 68.3
SGA_v2.0_scaffold22G09788 Striga asiatica HOM05D004037 ORTHO05D004744 2.2e-111 406.4 299 69.2
SalBow8G4021 Salvia bowleyana HOM05D004037 ORTHO05D004744 1.8e-110 403.3 281 68.7
unitig_37.g12156 Utricularia gibba HOM05D004037 ORTHO05D004744 1.4e-107 393.7 284 67.3
Oeu050828.1 Olea europaea HOM05D004037 ORTHO05D004744 1.9e-107 393.3 306 64.7
Nn048s41912 Nelumbo nucifera HOM05D004037 ORTHO05D004744 5.5e-107 391.7 269 72.1
SEGI_29918 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 8.2e-103 377.9 314 59.9
Sopen01g041950 Solanum pennellii HOM05D004037 ORTHO05D004744 1.2e-101 374.0 268 68.7
Pp3c15_7380 Physcomitrium patens HOM05D004037 ORTHO05D004744 1.4e-94 350.5 276 61.6
SMO347G0499 Selaginella moellendorffii HOM05D004037 ORTHO05D004744 1.4e-94 350.5 282 59.6
CBR_g41668 Chara braunii HOM05D004037 ORTHO05D004744 8.5e-92 341.3 306 55.6
Dinv24475 Davidia involucrata HOM05D004037 ORTHO05D004744 2.7e-90 336.3 240 71.7
Peaxi162Scf00434g00730 Petunia axillaris HOM05D004037 ORTHO05D004744 2.7e-90 336.3 186 87.1
Nitab4.5_0001165g0010 Nicotiana tabacum HOM05D004037 ORTHO05D004744 2.1e-82 310.1 217 71.4
Mapoly0033s0134 Marchantia polymorpha HOM05D004037 ORTHO05D004744 1.8e-81 307.0 282 56.7
FAN20G0369 Fragaria x ananassa HOM05D004037 ORTHO05D004744 5.2e-81 305.4 265 62.3
Cre14.g627850 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 5.3e-78 295.4 308 51.0
PRCOL_00006631 Prasinoderma coloniale HOM05D004037 ORTHO05D004744 1.2e-77 294.3 274 51.1
MCO16G413 Micromonas commoda HOM05D004037 ORTHO05D004744 3.8e-76 289.3 289 53.6
Gohir.D09G124433 Gossypium hirsutum HOM05D004037 ORTHO05D004744 3.5e-69 266.2 239 61.5
Peaxi162Scf00434g00733 Petunia axillaris HOM05D004037 ORTHO05D004744 1.0e-68 264.6 218 65.6
Peaxi162Scf00434g00740 Petunia axillaris HOM05D004037 ORTHO05D004744 1.2e-66 257.7 174 76.4
Gorai.006G143300 Gossypium raimondii HOM05D004037 ORTHO05D004744 9.2e-62 241.5 220 60.5
Actinidia11426 Actinidia chinensis HOM05D004037 ORTHO05D004744 1.8e-57 227.3 159 71.1
Nn048s41913 Nelumbo nucifera HOM05D004037 ORTHO05D004744 8.9e-57 224.9 173 66.5
Zm00001eb398800 Zea mays HOM05D004037 ORTHO05D004744 3.7e-55 219.5 176 59.1
BcaB01g03344 Brassica carinata HOM05D004037 ORTHO05D004744 1.9e-54 217.2 293 46.4
Lsat_1_v5_gn_9_123180 Lactuca sativa HOM05D002510 ORTHO05D007210 1.8e-49 200.7 175 60.0
AagrBONN_evm.TU.Sc2ySwM_368.1842 Anthoceros agrestis HOM05D004037 ORTHO05D004744 5.0e-44 182.6 192 52.1
FvH4_2g00640 Fragaria vesca HOM05D004037 ORTHO05D004744 7.1e-38 162.2 90 84.4
AagrBONN_evm.TU.Sc2ySwM_368.1728 Anthoceros agrestis HOM05D004037 ORTHO05D004744 3.0e-36 156.8 138 58.7
PSO451G0001 Papaver somniferum HOM05D004037 ORTHO05D004744 1.4e-33 147.9 77 92.2
Cre16.g656300 Chlamydomonas reinhardtii HOM05D004037 ORTHO05D004744 2.4e-33 147.1 280 33.6
MD02G1000400 Malus domestica HOM05D004037 ORTHO05D004744 5.6e-27 125.9 89 67.4
RhsimUnG0159300 Rhododendron simsii HOM05D004037 ORTHO05D004744 7.3e-27 125.6 173 46.2
MBI01_g38182_MAGBIO Magnolia biondii HOM05D004037 ORTHO05D004744 1.6e-26 124.4 75 80.0
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 2.0e-24 117.5 68 83.8
AagrBONN_evm.TU.Sc2ySwM_152.2 Anthoceros agrestis HOM05D004037 ORTHO05D004744 2.9e-23 113.6 164 42.7
ATR0716G071 Amborella trichopoda HOM05D004037 ORTHO05D004744 3.0e-20 103.6 66 80.3
AagrBONN_evm.TU.Sc2ySwM_344.5552 Anthoceros agrestis HOM05D004037 ORTHO05D004744 1.3e-15 88.2 83 55.4
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 8.1e-10 68.9 81 46.9
SEGI_36179 Sequoiadendron giganteum HOM05D004037 ORTHO05D004744 1.2e-08 65.1 181 26.5
CAN.G1019.1 Capsicum annuum HOM05D004037 ORTHO05D004744 4.5e-08 63.2 59 47.5
Lsat_1_v5_gn_5_112181 Lactuca sativa HOM05D002510 ORTHO05D007210 9.3e-06 55.5 29 86.2


User provided reference genes

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