Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G187400 Carya illinoinensis HOM05D001164 ORTHO05D126975 6.5e-70 267.3 139 100.0
Nitab4.5_0000017g0060 Nicotiana tabacum HOM05D001164 ORTHO05D001031 2.7e-07 59.3 39 76.9
Nitab4.5_0004897g0040 Nicotiana tabacum HOM05D001164 ORTHO05D001031 2.7e-07 59.3 39 76.9
Peaxi162Scf00929g00213 Petunia axillaris HOM05D001164 ORTHO05D001031 2.7e-07 59.3 39 76.9
Lalb_Chr22g0355181 Lupinus albus HOM05D001164 ORTHO05D001031 1.0e-06 57.4 39 69.2
QL02p005293 Quercus lobata HOM05D001164 ORTHO05D001031 1.0e-06 57.4 39 74.4
CANSAT25G2434 Cannabis sativa HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 74.4
CiPaw.16G045500 Carya illinoinensis HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 74.4
Dinv39325 Davidia involucrata HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 74.4
Lj5g0001500 Lotus japonicus HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 69.2
Solyc04g079120.3 Solanum lycopersicum HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 74.4
Sopen04g032730 Solanum pennellii HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 74.4
PGSC0003DMG400008021 Solanum tuberosum HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 74.4
Thecc.08G010500 Theobroma cacao HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 74.4
vmacro21533 Vaccinium macrocarpon HOM05D001164 ORTHO05D001031 1.7e-06 56.6 39 74.4
Ca_01812_v3 Cicer arietinum L. HOM05D001164 ORTHO05D001031 2.3e-06 56.2 39 69.2
Ca_29609_v3 Cicer arietinum L. HOM05D001164 ORTHO05D001031 2.3e-06 56.2 39 69.2
Lalb_Chr14g0368761 Lupinus albus HOM05D001164 ORTHO05D001031 2.3e-06 56.2 39 66.7
Medtr1g019760 Medicago truncatula HOM05D001164 ORTHO05D001031 2.3e-06 56.2 39 69.2
Rhsim06G0048500 Rhododendron simsii HOM05D001164 ORTHO05D001031 2.3e-06 56.2 39 71.8
Solyc07g024020.2 Solanum lycopersicum HOM05D001164 ORTHO05D001031 2.3e-06 56.2 46 60.9
Sopen07g012250 Solanum pennellii HOM05D001164 ORTHO05D001031 2.3e-06 56.2 39 71.8
TPR.G17528 Trifolium pratense HOM05D001164 ORTHO05D001031 2.3e-06 56.2 39 69.2
Oeu017166.1 Olea europaea HOM05D001164 ORTHO05D001031 3.0e-06 55.8 39 71.8
TWI36G0179 Tripterygium wilfordii HOM05D001164 ORTHO05D001031 3.0e-06 55.8 39 76.9
Atru.chr13.655 Acer truncatum HOM05D001164 ORTHO05D001031 3.9e-06 55.5 39 74.4
CAN.G371.31 Capsicum annuum HOM05D001164 ORTHO05D001031 3.9e-06 55.5 39 71.8
Dinv35970 Davidia involucrata HOM05D001164 ORTHO05D001031 3.9e-06 55.5 39 71.8
Manes.05G172200 Manihot esculenta HOM05D001164 ORTHO05D001031 3.9e-06 55.5 39 74.4
Nitab4.5_0000686g0070 Nicotiana tabacum HOM05D001164 ORTHO05D001031 3.9e-06 55.5 39 71.8
Nitab4.5_0001101g0120 Nicotiana tabacum HOM05D001164 ORTHO05D001031 3.9e-06 55.5 39 71.8
Oeu043554.1 Olea europaea HOM05D001164 ORTHO05D001031 3.9e-06 55.5 39 69.2
arahy.Tifrunner.gnm1.ann1.J06UL8 Arachis hypogaea HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 66.7
arahy.Tifrunner.gnm1.ann1.NX31P6 Arachis hypogaea HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 66.7
Cpa.g.sc49.4 Carica papaya HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 71.8
Duzib116G0464 Durio zibethinus HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 71.8
FvH4_2g34570 Fragaria vesca HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 71.8
FAN11G3241 Fragaria x ananassa HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 71.8
FAN15G3023 Fragaria x ananassa HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 71.8
FAN17G2185 Fragaria x ananassa HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 71.8
FAN20G0892 Fragaria x ananassa HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 71.8
Prupe.1G437600 Prunus persica HOM05D001164 ORTHO05D001031 5.1e-06 55.1 39 71.8
CiPaw.15G061100 Carya illinoinensis HOM05D001164 ORTHO05D001031 6.6e-06 54.7 39 71.8
FAN05G0933 Fragaria x ananassa HOM05D001164 ORTHO05D001031 6.6e-06 54.7 39 69.2
THA.LOC104798637 Tarenaya hassleriana HOM05D001164 ORTHO05D001031 6.6e-06 54.7 39 69.2
Zm00001eb019240 Zea mays HOM05D001164 ORTHO05D001031 6.6e-06 54.7 39 71.8
Os03g0395100 Oryza sativa ssp. japonica HOM05D001164 ORTHO05D001031 8.7e-06 54.3 39 69.2
Zm00001eb392700 Zea mays HOM05D001164 ORTHO05D001031 8.7e-06 54.3 39 69.2


User provided reference genes

Program Settings