Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-37 158.7 80 100.0
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.6e-36 155.6 80 96.2
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.3e-35 151.8 80 95.0
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.1e-35 150.6 80 93.8
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.3e-18 94.7 80 66.2
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.4e-18 93.6 81 67.9
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 7.4e-18 93.6 80 66.2
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 7.4e-18 93.6 80 72.5
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.8e-17 91.7 79 65.8
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.3e-17 90.5 80 63.8
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.3e-17 90.5 80 63.8
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 8.2e-17 90.1 80 65.0
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.1e-16 89.7 81 65.4
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.8e-16 89.0 80 68.8
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.8e-16 89.0 80 71.2
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.8e-16 89.0 80 71.2
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 1.8e-16 89.0 82 61.0
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.4e-16 88.6 80 62.5
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.4e-16 88.6 80 63.8
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.1e-16 87.8 80 72.5
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.1e-16 87.8 70 67.1
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 4.1e-16 87.8 80 57.5
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.3e-16 87.4 80 68.8
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 7.0e-16 87.0 80 63.8
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 7.0e-16 87.0 73 67.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.1e-16 86.7 80 70.0
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 9.1e-16 86.7 82 65.9
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 9.1e-16 86.7 80 63.8
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-15 85.5 80 70.0
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-15 85.5 79 62.0
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.5e-15 84.3 71 70.4
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.7e-15 83.6 80 66.2
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 1.7e-14 82.4 80 63.8
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 1.7e-14 82.4 80 57.5
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-14 82.0 79 64.6
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-14 81.6 80 68.8
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 5.0e-14 80.9 80 62.5
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 6.5e-14 80.5 77 54.5
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 8.5e-14 80.1 80 61.2
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 8.5e-14 80.1 79 62.0
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-13 79.7 80 63.8
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 1.1e-13 79.7 85 60.0
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-13 79.3 80 67.5
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-13 79.3 80 62.5
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.5e-13 79.3 73 60.3
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.9e-13 79.0 80 60.0
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.2e-13 78.2 80 61.2
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.2e-13 78.2 80 57.5
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 4.2e-13 77.8 72 68.1
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 5.5e-13 77.4 80 57.5
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 7.2e-13 77.0 80 57.5
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 7.2e-13 77.0 79 60.8
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 9.4e-13 76.6 80 51.2
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 9.4e-13 76.6 79 62.0
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 9.4e-13 76.6 79 60.8
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 9.4e-13 76.6 73 60.3
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-12 76.3 76 63.2
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 2.1e-12 75.5 72 63.9
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 2.1e-12 75.5 80 58.8
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 2.1e-12 75.5 74 63.5
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 2.7e-12 75.1 76 52.6
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 2.7e-12 75.1 80 53.8
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-12 75.1 76 63.2
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-12 75.1 73 58.9
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 3.6e-12 74.7 72 58.3
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 3.6e-12 74.7 80 51.2
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 4.7e-12 74.3 71 59.2
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 4.7e-12 74.3 71 57.7
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.0e-11 73.2 72 56.9
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-11 72.8 73 57.5
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 1.4e-11 72.8 78 64.1
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 1.8e-11 72.4 70 54.3
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 1.8e-11 72.4 77 51.9
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 1.8e-11 72.4 83 54.2
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 2.3e-11 72.0 70 62.9
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.0e-11 71.6 69 69.6
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 3.0e-11 71.6 72 56.9
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 3.0e-11 71.6 67 61.2
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.0e-11 71.2 74 70.3
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 4.0e-11 71.2 67 70.1
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 4.0e-11 71.2 68 55.9
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 5.2e-11 70.9 72 56.9
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 5.2e-11 70.9 73 57.5
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 6.7e-11 70.5 79 57.0
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 1.1e-10 69.7 70 65.7
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 2.0e-10 68.9 70 57.1
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 7.5e-10 67.0 71 54.9
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 9.7e-10 66.6 80 50.0
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.7e-09 65.9 80 51.2
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 1.7e-09 65.9 77 50.6
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 2.2e-09 65.5 85 50.6
Nn1g09677 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.2e-09 65.5 77 53.2
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 2.8e-09 65.1 70 51.4
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 2.8e-09 65.1 71 50.7
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 2.8e-09 65.1 81 48.1
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 3.7e-09 64.7 61 59.0
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 3.7e-09 64.7 80 50.0
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 3.7e-09 64.7 76 47.4
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 3.7e-09 64.7 76 47.4
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 4.8e-09 64.3 79 49.4
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 4.8e-09 64.3 84 47.6
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.3e-09 63.9 80 63.8
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 6.3e-09 63.9 81 49.4
CiPaw.01G171900 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.2e-09 63.5 76 47.4
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 8.2e-09 63.5 80 48.8
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 1.4e-08 62.8 74 51.4
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 4.1e-08 61.2 70 51.4
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 4.1e-08 61.2 72 58.3
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.0e-08 60.5 81 60.5
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 9.1e-08 60.1 77 45.5
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.6e-07 59.3 74 52.7
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-07 58.9 77 61.0
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 2.7e-07 58.5 70 48.6
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 3.5e-07 58.2 72 52.8
Peaxi162Scf00075g01414 Petunia axillaris HOM05D006282 ORTHO05D007460 3.5e-07 58.2 70 47.1
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 7.7e-07 57.0 76 48.7
FAN26G2261 Fragaria x ananassa HOM05D006282 ORTHO05D007460 1.3e-06 56.2 83 42.2
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.2e-06 55.5 57 57.9
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.0e-06 54.3 76 46.1


User provided reference genes

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