Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 3.4e-86 321.6 160 100.0
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 2.0e-75 285.8 160 88.8
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 8.0e-72 273.9 158 84.2
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 7.0e-68 260.8 149 82.6
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 2.7e-67 258.8 138 88.4
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 2.7e-67 258.8 152 80.9
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 4.6e-67 258.1 147 81.6
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 7.8e-67 257.3 160 77.5
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 3.0e-66 255.4 158 79.1
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 3.0e-66 255.4 147 82.3
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 3.9e-66 255.0 158 76.6
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 1.5e-65 253.1 144 83.3
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 1.9e-65 252.7 155 76.1
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 2.5e-65 252.3 147 80.3
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 4.3e-65 251.5 156 77.6
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 5.6e-65 251.1 147 80.3
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 5.6e-65 251.1 154 76.0
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 7.3e-65 250.8 153 79.1
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 9.5e-65 250.4 136 83.1
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 1.2e-64 250.0 158 76.6
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 1.2e-64 250.0 147 78.9
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 1.2e-64 250.0 156 78.2
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 1.6e-64 249.6 154 75.3
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 1.6e-64 249.6 150 77.3
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 2.1e-64 249.2 155 78.1
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 2.1e-64 249.2 150 78.0
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 2.1e-64 249.2 139 82.0
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 2.8e-64 248.8 159 75.5
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 3.6e-64 248.4 137 82.5
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 4.7e-64 248.1 139 80.6
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 4.7e-64 248.1 154 75.3
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 4.7e-64 248.1 158 75.9
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 4.7e-64 248.1 151 76.2
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 6.2e-64 247.7 155 75.5
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 8.0e-64 247.3 148 79.7
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 8.0e-64 247.3 159 74.2
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 1.1e-63 246.9 137 81.8
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 1.1e-63 246.9 137 81.8
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 1.1e-63 246.9 137 81.8
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 1.1e-63 246.9 137 81.8
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 1.1e-63 246.9 137 81.8
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 1.8e-63 246.1 156 75.0
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 1.8e-63 246.1 154 75.3
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 1.8e-63 246.1 155 76.1
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 2.3e-63 245.7 158 75.3
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 3.1e-63 245.4 137 81.0
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 3.1e-63 245.4 156 75.0
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 3.1e-63 245.4 156 75.0
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 3.1e-63 245.4 137 82.5
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 4.0e-63 245.0 153 76.5
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 4.0e-63 245.0 159 76.7
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 5.2e-63 244.6 159 76.7
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 5.2e-63 244.6 159 74.8
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 5.2e-63 244.6 147 77.6
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 8.9e-63 243.8 149 76.5
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 8.9e-63 243.8 158 72.2
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 8.9e-63 243.8 151 72.8
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 8.9e-63 243.8 151 72.8
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 8.9e-63 243.8 159 74.8
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 8.9e-63 243.8 159 73.6
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 1.2e-62 243.4 157 75.2
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 2.0e-62 242.7 134 82.1
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 2.0e-62 242.7 172 70.9
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 2.0e-62 242.7 156 75.0
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 2.0e-62 242.7 156 75.0
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 2.0e-62 242.7 149 75.8
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 2.6e-62 242.3 139 79.9
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 4.4e-62 241.5 154 74.0
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 7.5e-62 240.7 152 75.7
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 7.5e-62 240.7 152 75.7
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 7.5e-62 240.7 152 75.7
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 1.3e-61 240.0 135 80.7
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 1.3e-61 240.0 151 76.2
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.3e-61 240.0 135 81.5
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 2.2e-61 239.2 159 74.2
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 3.7e-61 238.4 149 75.8
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 4.9e-61 238.0 154 72.7
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 6.4e-61 237.7 157 69.4
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 1.1e-60 236.9 139 77.7
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 1.1e-60 236.9 156 71.2
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 1.1e-60 236.9 155 72.9
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 1.9e-60 236.1 139 77.0
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 1.9e-60 236.1 157 73.2
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 2.4e-60 235.7 139 77.0
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 2.4e-60 235.7 139 77.0
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 2.4e-60 235.7 149 75.8
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 4.1e-60 235.0 154 72.1
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 7.0e-60 234.2 149 74.5
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 9.2e-60 233.8 139 75.5
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 9.2e-60 233.8 145 73.1
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.2e-59 233.4 158 72.2
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 1.2e-59 233.4 158 70.3
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 1.6e-59 233.0 156 73.7
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 1.6e-59 233.0 134 79.1
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 2.1e-59 232.6 158 70.9
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 6.0e-59 231.1 159 72.3
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.3e-58 229.9 158 70.9
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 1.7e-58 229.6 153 71.9
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 3.0e-58 228.8 135 74.8
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 3.0e-58 228.8 139 74.1
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 3.0e-58 228.8 132 78.8
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 2.5e-57 225.7 133 76.7
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 3.3e-57 225.3 161 65.2
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 3.6e-56 221.9 136 72.1
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 1.1e-55 220.3 147 68.7
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 2.3e-55 219.2 175 62.9
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.1e-55 218.8 198 59.1
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.2e-55 218.0 206 57.3
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 6.8e-55 217.6 158 72.2
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.9e-55 217.2 187 59.4
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 5.8e-54 214.5 141 70.9
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 9.2e-52 207.2 126 73.8
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 6.0e-51 204.5 137 73.7
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 1.1e-44 183.7 97 86.6
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 4.2e-44 181.8 100 82.0
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 9.2e-44 180.6 137 63.5
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 2.1e-43 179.5 134 59.0
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 4.6e-43 178.3 146 58.2
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 7.8e-35 151.0 83 81.9
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 7.4e-25 117.9 72 75.0
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-22 110.2 83 61.4
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 9.6e-17 90.9 82 54.9
Cre01.g038950 Chlamydomonas reinhardtii HOM05D006500 ORTHO05D008028 2.4e-15 86.3 149 34.2
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 5.5e-12 75.1 128 33.6


User provided reference genes

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