Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 4.8e-87 325.1 252 100.0
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 7.4e-56 221.5 252 70.2
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 1.5e-48 197.2 256 65.2
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 4.4e-48 195.7 256 66.0
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 3.7e-47 192.6 256 65.6
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 6.5e-44 181.8 219 70.3
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 1.5e-43 180.6 252 62.3
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 4.0e-41 172.6 252 60.3
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 1.6e-37 160.6 252 59.5
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 2.5e-35 153.3 248 56.9
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 2.8e-34 149.8 248 57.3
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 2.8e-34 149.8 248 56.5
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.0e-33 147.9 248 56.5
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 5.2e-25 119.0 250 50.8
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.2e-24 117.9 249 52.2
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 2.2e-23 113.6 250 50.4
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 2.9e-23 113.2 250 57.6
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 2.4e-22 110.2 253 52.6
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 3.2e-22 109.8 253 54.9
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 1.2e-21 107.8 239 51.0
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 2.7e-21 106.7 252 49.2
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 3.5e-21 106.3 246 54.5
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 4.6e-21 105.9 247 53.4
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 6.6e-20 102.1 254 51.6
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.1e-19 101.3 246 51.6
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.6e-18 96.3 217 57.6
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 4.7e-18 95.9 249 49.8
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 8.0e-18 95.1 221 55.2
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 1.1e-17 94.7 252 51.2
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 1.8e-17 94.0 259 48.3
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.8e-17 94.0 252 46.0
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 4.0e-17 92.8 249 51.0
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 5.2e-17 92.4 253 46.2
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 6.8e-17 92.0 254 41.7
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 1.2e-16 91.3 248 50.4
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 2.6e-16 90.1 254 50.4
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 5.8e-16 89.0 244 48.8
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 9.8e-16 88.2 262 50.0
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 9.8e-16 88.2 284 41.2
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 1.1e-14 84.7 219 51.1
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.1e-14 84.7 250 48.8
Medtr4g122710 Medicago truncatula HOM05D007634 ORTHO05D004310 3.2e-14 83.2 216 53.7
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 4.1e-14 82.8 247 48.2
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 1.2e-13 81.3 222 52.3
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 2.7e-13 80.1 220 53.6
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 7.8e-13 78.6 252 46.0
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 1.7e-12 77.4 88 44.3
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 1.7e-12 77.4 216 43.5
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 3.0e-12 76.6 256 49.6
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 3.9e-12 76.3 254 47.2
Lalb_Chr07g0181961 Lupinus albus HOM05D007634 ORTHO05D004310 6.6e-12 75.5 218 52.3
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 1.1e-11 74.7 186 58.6
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 1.9e-11 73.9 249 49.8
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 1.9e-11 73.9 249 50.6
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 2.5e-11 73.6 257 32.7
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 4.3e-11 72.8 217 53.0
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 4.3e-11 72.8 88 42.0
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 5.6e-11 72.4 186 58.6
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 7.3e-11 72.0 245 48.6
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 9.5e-11 71.6 88 40.9
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 1.2e-10 71.2 208 56.2
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 1.2e-10 71.2 220 51.8
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 2.1e-10 70.5 90 41.1
Ca_21412_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 4.7e-10 69.3 216 49.5
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 8.1e-10 68.6 246 45.9
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 8.1e-10 68.6 92 45.7
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.1e-09 68.2 91 46.2
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 1.1e-09 68.2 206 58.3
Psat4g021760 Pisum sativum HOM05D007634 ORTHO05D004310 1.4e-09 67.8 207 48.8
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 2.3e-09 67.0 251 45.4
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 2.3e-09 67.0 251 45.4
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 2.3e-09 67.0 247 44.9
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 3.1e-09 66.6 91 39.6
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 5.2e-09 65.9 90 45.6
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 6.8e-09 65.5 251 47.8
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 6.8e-09 65.5 92 43.5
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 8.9e-09 65.1 252 44.4
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 8.9e-09 65.1 92 42.4
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 1.2e-08 64.7 247 47.0
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 1.2e-08 64.7 199 52.3
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.5e-08 64.3 90 45.6
Nn4g25534 Nelumbo nucifera HOM05D009814 ORTHO05D004310 2.0e-08 63.9 215 55.8
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 3.4e-08 63.2 224 49.1
Lalb_Chr20g0120751 Lupinus albus HOM05D007634 ORTHO05D004310 7.6e-08 62.0 214 47.2
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 9.9e-08 61.6 238 37.4
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 1.7e-07 60.8 247 45.7
Lalb_Chr06g0166981 Lupinus albus HOM05D012173 ORTHO05D004310 1.7e-07 60.8 225 36.9
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 2.2e-07 60.5 87 40.2
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 2.9e-07 60.1 81 43.2
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 2.9e-07 60.1 87 39.1
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 3.7e-07 59.7 224 48.2
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 3.7e-07 59.7 84 45.2
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 6.4e-07 58.9 253 41.5
Rhsim02G0002500 Rhododendron simsii HOM05D032642 ORTHO05D004310 6.4e-07 58.9 185 50.8
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 8.3e-07 58.5 221 33.5
Actinidia16871 Actinidia chinensis HOM05D013055 ORTHO05D012930 1.1e-06 58.2 189 57.1
EL10Ac3g05537 Beta vulgaris HOM05D007634 ORTHO05D004310 2.4e-06 57.0 118 31.4
Glyma.17G035900 Glycine max HOM05D007634 ORTHO05D004310 2.4e-06 57.0 103 36.9
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 3.2e-06 56.6 78 41.0
Sc17g0000300 Simmondsia chinensis HOM05D009814 ORTHO05D004310 4.1e-06 56.2 215 47.0
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 5.4e-06 55.8 252 44.0
HanXRQChr04g0108411 Helianthus annuus HOM05D009154 ORTHO05D004310 7.1e-06 55.5 54 55.6


User provided reference genes

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