Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G128900 Carya illinoinensis HOM05D005860 ORTHO05D006977 2.6e-163 579.3 457 100.0
QL02p072028 Quercus lobata HOM05D005860 ORTHO05D006977 5.8e-107 392.1 497 68.4
CiPaw.04G034700 Carya illinoinensis HOM05D005860 ORTHO05D006977 2.6e-99 366.7 459 65.4
Haze_14838 Corylus avellana HOM05D005860 ORTHO05D006977 3.4e-99 366.3 513 65.5
Manes.15G158200 Manihot esculenta HOM05D005860 ORTHO05D006977 1.2e-96 357.8 488 70.9
Eucgr.J02311 Eucalyptus grandis HOM05D005860 ORTHO05D006977 1.6e-93 347.4 480 62.3
Duzib116G0811 Durio zibethinus HOM05D005860 ORTHO05D006977 1.3e-90 337.8 474 65.2
Cpa.g.sc171.37 Carica papaya HOM05D005860 ORTHO05D006977 4.9e-90 335.9 475 68.0
Atru.chr4.382 Acer truncatum HOM05D005860 ORTHO05D006977 8.4e-90 335.1 478 65.7
Hma1.2p1_1219F.1_g267900 Hydrangea macrophylla HOM05D005860 ORTHO05D006977 1.6e-88 330.9 499 62.7
MD17G1015100 Malus domestica HOM05D005860 ORTHO05D006977 1.7e-87 327.4 477 70.4
TAR622G0256 Trochodendron aralioides HOM05D005860 ORTHO05D006977 1.7e-87 327.4 471 62.4
COL.COLO4_03595 Corchorus olitorius HOM05D005860 ORTHO05D006977 2.3e-87 327.0 445 73.5
Potri.017G067600 Populus trichocarpa HOM05D005860 ORTHO05D006977 1.5e-86 324.3 483 65.4
Lj2g0013553 Lotus japonicus HOM05D005860 ORTHO05D006977 6.2e-85 318.9 472 68.0
Ciclev10011572m.g Citrus clementina HOM05D005860 ORTHO05D006977 1.1e-84 318.2 451 67.4
Phvul.004G055500 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 3.1e-84 316.6 472 62.5
TWI56G1326 Tripterygium wilfordii HOM05D005860 ORTHO05D006977 6.9e-84 315.5 472 67.6
Sabra17G0063700 Salix brachista HOM05D005860 ORTHO05D006977 7.6e-83 312.0 459 65.4
GSVIVG01001819001 Vitis vinifera HOM05D005860 ORTHO05D006977 7.6e-83 312.0 475 65.1
Sed0023405 Sechium edule HOM05D005860 ORTHO05D006977 1.3e-82 311.2 474 66.9
Phvul.004G147000 Phaseolus vulgaris HOM05D005860 ORTHO05D006977 1.7e-82 310.8 471 68.4
Glyma.05G075600 Glycine max HOM05D005860 ORTHO05D006977 2.2e-82 310.5 477 62.5
RcHm_v2.0_Chr2g0174841 Rosa chinensis HOM05D005860 ORTHO05D006977 5.4e-81 305.8 446 72.6
Lalb_Chr02g0157831 Lupinus albus HOM05D005860 ORTHO05D006977 9.3e-81 305.1 479 66.6
Glyma.19G075100 Glycine max HOM05D005860 ORTHO05D006977 1.6e-80 304.3 447 65.3
VMungo0464G0018 Vigna mungo HOM05D005860 ORTHO05D006977 6.0e-80 302.4 447 70.0
ClCG01G016270 Citrullus lanatus HOM05D005860 ORTHO05D006977 1.0e-79 301.6 471 67.1
Actinidia30891 Actinidia chinensis HOM05D005860 ORTHO05D006977 1.8e-79 300.8 483 67.3
CSS0015596 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 1.8e-79 300.8 482 65.6
Dinv19535 Davidia involucrata HOM05D005860 ORTHO05D006977 1.8e-79 300.8 471 62.8
TAR629G2046 Trochodendron aralioides HOM05D005860 ORTHO05D006977 3.9e-79 299.7 469 59.7
arahy.Tifrunner.gnm1.ann1.SB3XQV Arachis hypogaea HOM05D005860 ORTHO05D006977 6.7e-79 298.9 446 68.4
FvH4_6g53060 Fragaria vesca HOM05D005860 ORTHO05D006977 4.3e-78 296.2 452 71.0
Sc16g0003100 Simmondsia chinensis HOM05D005860 ORTHO05D006977 4.3e-78 296.2 497 61.2
Peaxi162Scf00420g00442 Petunia axillaris HOM05D005860 ORTHO05D006977 5.6e-78 295.8 459 64.5
arahy.Tifrunner.gnm1.ann1.WZ54PF Arachis hypogaea HOM05D005860 ORTHO05D006977 9.6e-78 295.0 446 68.2
CSS0028115 Camellia sinensis var. sinensis HOM05D005860 ORTHO05D006977 9.6e-78 295.0 462 67.5
PSO478G3943 Papaver somniferum HOM05D005860 ORTHO05D006977 1.6e-77 294.3 467 63.6
Gohir.A10G079300 Gossypium hirsutum HOM05D005860 ORTHO05D006977 2.1e-77 293.9 427 65.8
Nitab4.5_0002887g0110 Nicotiana tabacum HOM05D005860 ORTHO05D006977 2.8e-77 293.5 468 63.2
CsaV3_6G042570 Cucumis sativus L. HOM05D005860 ORTHO05D006977 3.7e-77 293.1 451 69.0
Sopen02g038590 Solanum pennellii HOM05D005860 ORTHO05D006977 3.7e-77 293.1 457 64.1
Gorai.011G077700 Gossypium raimondii HOM05D005860 ORTHO05D006977 6.2e-77 292.4 427 65.8
CAN.G473.79 Capsicum annuum HOM05D005860 ORTHO05D006977 8.1e-77 292.0 459 63.4
FAN05G4081 Fragaria x ananassa HOM05D005860 ORTHO05D006977 1.1e-76 291.6 452 70.4
Lj7A609T51 Lonicera japonica HOM05D005860 ORTHO05D006977 1.1e-76 291.6 461 62.9
Oeu058768.1 Olea europaea HOM05D005860 ORTHO05D006977 1.1e-76 291.6 462 61.5
CANSAT64G0040 Cannabis sativa HOM05D005860 ORTHO05D006977 1.8e-76 290.8 488 61.3
Solyc02g093940.3 Solanum lycopersicum HOM05D005860 ORTHO05D006977 1.8e-76 290.8 457 63.9
PSO017G5933 Papaver somniferum HOM05D005860 ORTHO05D006977 2.4e-76 290.4 467 64.0
TPR.G5727 Trifolium pratense HOM05D001503 ORTHO05D003820 3.1e-76 290.0 451 63.4
FAN09G0694 Fragaria x ananassa HOM05D005860 ORTHO05D006977 4.0e-76 289.7 452 70.4
Nitab4.5_0009757g0020 Nicotiana tabacum HOM05D005860 ORTHO05D006977 6.9e-76 288.9 472 63.1
MELO3C007497.2 Cucumis melo HOM05D005860 ORTHO05D006977 1.5e-75 287.7 441 69.2
SalBow1G3206 Salvia bowleyana HOM05D005860 ORTHO05D006977 2.0e-75 287.3 472 64.6
SalBow7G2829 Salvia bowleyana HOM05D005860 ORTHO05D006977 2.0e-75 287.3 472 64.6
PGSC0003DMG400020220 Solanum tuberosum HOM05D005860 ORTHO05D006977 2.0e-75 287.3 459 63.0
PSO782G4049 Papaver somniferum HOM05D005860 ORTHO05D006977 2.6e-75 287.0 470 60.6
Psat1g161720 Pisum sativum HOM05D005860 ORTHO05D006977 2.2e-74 283.9 476 62.4
Prupe.3G302700 Prunus persica HOM05D005860 ORTHO05D006977 1.9e-73 280.8 379 79.7
Aqoxy5G03469 Aquilegia oxysepala HOM05D005860 ORTHO05D006977 4.2e-73 279.6 474 64.1
Medtr2g034600 Medicago truncatula HOM05D005860 ORTHO05D006977 4.2e-73 279.6 452 63.9
MSTRG.15567 Avicennia marina HOM05D005860 ORTHO05D006977 7.1e-73 278.9 458 65.3
PGR083G1804 Punica granatum HOM05D005860 ORTHO05D006977 7.1e-73 278.9 515 45.0
Thecc.08G160800 Theobroma cacao HOM05D005860 ORTHO05D006977 2.1e-72 277.3 384 69.8
Cc02_g00900 Coffea canephora HOM05D005860 ORTHO05D006977 2.7e-72 276.9 459 59.7
Migut.K01447 Erythranthe guttata HOM05D005860 ORTHO05D006977 3.5e-72 276.6 479 57.4
ATR0686G114 Amborella trichopoda HOM05D005860 ORTHO05D006977 6.0e-72 275.8 461 62.0
FAN14G2391 Fragaria x ananassa HOM05D005860 ORTHO05D006977 1.1e-70 271.6 445 59.1
Sed0015041 Sechium edule HOM05D005860 ORTHO05D006977 1.1e-70 271.6 471 55.6
PSO063G3212 Papaver somniferum HOM05D005860 ORTHO05D006977 4.3e-70 269.6 435 62.3
THA.LOC104825612 Tarenaya hassleriana HOM05D005860 ORTHO05D006977 2.1e-69 267.3 486 58.2
DCAR_021767 Daucus carota HOM05D005860 ORTHO05D006977 5.3e-68 262.7 440 67.3
Ah.03g142080 Amaranthus hybridus HOM05D005860 ORTHO05D006977 4.2e-65 253.1 430 66.7
Nn4g22386 Nelumbo nucifera HOM05D005860 ORTHO05D006977 5.5e-65 252.7 384 54.4
SGA_v2.0_scaffold7G03541 Striga asiatica HOM05D005860 ORTHO05D006977 4.6e-64 249.6 447 59.3
Hund24045 Selenicereus undatus HOM05D005860 ORTHO05D006977 3.0e-63 246.9 450 62.7
EL10Ac1g02122 Beta vulgaris HOM05D005860 ORTHO05D006977 6.7e-63 245.7 433 64.2
Lju41A50T54 Lonicera japonica HOM05D005860 ORTHO05D006977 1.4e-60 238.0 452 58.8
AUR62032474 Chenopodium quinoa HOM05D005860 ORTHO05D006977 6.9e-60 235.7 433 64.0
AUR62043070 Chenopodium quinoa HOM05D005860 ORTHO05D006977 9.0e-60 235.3 433 64.7
AL7G41520 Arabidopsis lyrata HOM05D005860 ORTHO05D006977 1.2e-59 235.0 465 58.3
A01p23060 Brassica napus HOM05D005860 ORTHO05D006977 7.6e-59 232.3 438 61.6
Carub.0007s2760 Capsella rubella HOM05D005860 ORTHO05D006977 7.6e-59 232.3 460 58.7
Thhalv10025001m.g Eutrema salsugineum HOM05D005860 ORTHO05D006977 1.3e-58 231.5 436 61.5
Sp7g12700 Schrenkiella parvula HOM05D005860 ORTHO05D006977 1.7e-58 231.1 438 60.0
BraA01t02219Z Brassica rapa HOM05D005860 ORTHO05D006977 3.8e-58 229.9 433 61.9
BcaC09g50132 Brassica carinata HOM05D005860 ORTHO05D006977 5.0e-58 229.6 436 61.7
ECA232G2764 Erigeron canadensis HOM05D005860 ORTHO05D006977 1.1e-57 228.4 461 57.9
Aa31LG9G2730 Aethionema arabicum HOM05D005860 ORTHO05D006977 3.2e-57 226.9 462 57.8
BcaNung00353 Brassica carinata HOM05D005860 ORTHO05D006977 4.2e-57 226.5 435 60.9
C01p28690 Brassica napus HOM05D005860 ORTHO05D006977 4.2e-57 226.5 436 61.5
BolC1t02795H Brassica oleracea HOM05D005860 ORTHO05D006977 4.2e-57 226.5 436 61.5
CARHR220830 Cardamine hirsuta HOM05D005860 ORTHO05D006977 4.2e-57 226.5 459 58.6
AT4G14605 Arabidopsis thaliana HOM05D005860 ORTHO05D006977 7.2e-57 225.7 473 57.5
HanXRQChr15g0486891 Helianthus annuus HOM05D005860 ORTHO05D006977 7.2e-57 225.7 486 57.0
unitig_0.g543 Utricularia gibba HOM05D005860 ORTHO05D006977 7.9e-56 222.2 457 57.5
Glyma.09G171700 Glycine max HOM05D005860 ORTHO05D006977 9.7e-54 215.3 222 54.5
Rhsim08G0044500 Rhododendron simsii HOM05D005860 ORTHO05D006977 9.7e-54 215.3 459 42.5
Zm00001eb246440 Zea mays HOM05D005860 ORTHO05D006977 5.3e-52 209.5 440 54.3
Rhsim08G0044400 Rhododendron simsii HOM05D005860 ORTHO05D006977 2.2e-50 204.1 455 54.5
vmacro18326 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 4.2e-49 199.9 461 48.4
CDE09G0687 Ceratophyllum demersum HOM05D005860 ORTHO05D006977 1.2e-48 198.4 434 51.2
Rhsim08G0045000 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.6e-48 198.0 480 54.6
Rhsim08G0044700 Rhododendron simsii HOM05D005860 ORTHO05D006977 4.7e-48 196.4 480 42.9
Gohir.D10G072200 Gossypium hirsutum HOM05D005860 ORTHO05D006977 1.1e-44 185.3 258 64.3
HPP92_024250 Vanilla planifolia HOM05D005860 ORTHO05D006977 2.6e-43 180.6 337 61.4
Lsat_1_v5_gn_4_185440 Lactuca sativa HOM05D005860 ORTHO05D006977 1.0e-42 178.7 364 68.7
Oeu050423.1 Olea europaea HOM05D005860 ORTHO05D006977 8.5e-42 175.6 223 47.1
HPP92_024230 Vanilla planifolia HOM05D005860 ORTHO05D006977 8.2e-37 159.1 327 61.2
FAN14G0528 Fragaria x ananassa HOM05D005860 ORTHO05D006977 4.7e-32 143.3 277 71.8
Rhsim08G0044900 Rhododendron simsii HOM05D005860 ORTHO05D006977 4.0e-31 140.2 367 44.7
Cfa015733 Carpinus fangiana HOM05D005860 ORTHO05D006977 7.5e-30 136.0 108 67.6
Haze_00763 Corylus avellana HOM05D005860 ORTHO05D006977 3.7e-29 133.7 397 42.1
ATR0686G162 Amborella trichopoda HOM05D005860 ORTHO05D006977 4.8e-29 133.3 360 35.6
Os02g0602400 Oryza sativa ssp. japonica HOM05D005860 ORTHO05D006977 5.9e-27 126.3 268 51.5
Glyma.09G171766 Glycine max HOM05D005860 ORTHO05D006977 1.5e-25 121.7 145 75.9
TAR374G0650 Trochodendron aralioides HOM05D005860 ORTHO05D006977 8.8e-23 112.5 136 50.0
ATR0609G011 Amborella trichopoda HOM05D005860 ORTHO05D006977 3.1e-20 104.0 145 58.6
Mapoly0029s0044 Marchantia polymorpha HOM05D005860 ORTHO05D006977 3.8e-18 97.1 442 41.2
Pp3c9_18330 Physcomitrium patens HOM05D005860 ORTHO05D006977 2.1e-16 91.3 403 48.6
TAR374G0834 Trochodendron aralioides HOM05D005860 ORTHO05D006977 2.8e-13 80.9 67 62.7
TPR.G88 Trifolium pratense HOM05D005860 ORTHO05D006977 3.7e-13 80.5 60 65.0
Migut.C00523 Erythranthe guttata HOM05D005860 ORTHO05D006977 8.3e-13 79.3 140 43.6
vmacro18329 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 4.5e-11 73.6 143 38.5
Rhsim08G0044800 Rhododendron simsii HOM05D005860 ORTHO05D006977 1.5e-09 68.6 80 50.0
Sed0001458 Sechium edule HOM05D005860 ORTHO05D006977 3.3e-09 67.4 106 40.6
vmacro18330 Vaccinium macrocarpon HOM05D005860 ORTHO05D006977 4.7e-08 63.5 56 55.4
Pp3c15_12290 Physcomitrium patens HOM05D005860 ORTHO05D006977 8.0e-08 62.8 426 45.5
AagrBONN_evm.TU.Sc2ySwM_117.926 Anthoceros agrestis HOM05D000273 ORTHO05D006977 1.4e-07 62.0 104 38.5
VMungo0251G0115 Vigna mungo HOM05D002901 ORTHO05D003183 9.8e-06 55.8 92 34.8


User provided reference genes

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