Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.8e-208 729.2 418 100.0
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 2.0e-106 390.2 488 55.9
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 5.0e-97 359.0 397 58.7
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.1e-96 357.8 398 60.3
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 1.3e-94 350.9 411 58.6
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.5e-90 337.4 398 58.5
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.7e-89 334.0 404 55.0
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 1.7e-89 334.0 324 59.9
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.2e-89 333.6 358 62.0
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.1e-88 331.3 415 54.9
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 2.5e-88 330.1 391 58.8
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 5.5e-88 328.9 400 56.8
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 2.1e-87 327.0 406 55.4
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 6.1e-87 325.5 385 60.0
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 1.5e-85 320.9 405 55.3
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 2.6e-85 320.1 404 55.0
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 5.7e-85 318.9 405 56.8
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.8e-84 316.6 409 55.5
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 2.4e-83 313.5 403 55.1
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 6.9e-83 312.0 398 54.0
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.0e-82 310.5 353 58.6
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 2.0e-82 310.5 362 58.8
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 5.9e-82 308.9 393 55.0
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 2.2e-81 307.0 398 54.0
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 6.5e-81 305.4 367 56.7
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 4.2e-80 302.8 406 54.4
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 4.2e-80 302.8 415 53.7
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 9.4e-80 301.6 393 56.0
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.6e-79 300.8 403 53.8
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.6e-79 300.8 415 53.5
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 6.1e-79 298.9 386 54.7
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 1.4e-78 297.7 398 53.3
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 6.7e-78 295.4 395 53.4
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 8.8e-78 295.0 364 55.5
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 2.2e-76 290.4 383 53.0
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 8.2e-76 288.5 365 53.4
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 8.2e-76 288.5 383 55.4
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.8e-75 287.3 406 51.5
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 2.4e-75 287.0 410 52.4
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 1.3e-73 281.2 376 54.3
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 1.3e-73 281.2 383 52.5
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 6.5e-73 278.9 412 50.7
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 8.5e-73 278.5 396 54.5
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 1.9e-72 277.3 383 52.7
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 2.5e-72 276.9 373 53.9
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 3.2e-72 276.6 376 54.8
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 3.6e-71 273.1 243 61.7
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 6.1e-71 272.3 403 52.1
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 8.8e-70 268.5 394 53.8
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 8.8e-70 268.5 347 55.6
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 1.2e-69 268.1 403 51.9
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.2e-69 268.1 394 52.3
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.6e-69 266.9 392 52.3
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 4.4e-69 266.2 387 54.0
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 5.7e-69 265.8 382 51.6
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 9.7e-69 265.0 410 49.0
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.8e-68 263.5 370 53.5
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.1e-67 261.5 475 44.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.8e-67 260.8 351 53.0
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.1e-67 260.0 415 47.5
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 5.3e-67 259.2 370 53.0
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 5.3e-67 259.2 368 53.5
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 4.5e-66 256.1 314 52.2
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 1.7e-65 254.2 383 50.4
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 2.2e-65 253.8 311 48.2
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.5e-64 251.1 207 64.7
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 1.5e-64 251.1 423 47.0
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 4.2e-64 249.6 396 50.5
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.6e-63 247.7 432 45.8
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.6e-63 247.7 403 47.4
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 2.7e-63 246.9 368 51.4
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 3.6e-63 246.5 302 49.7
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 4.7e-63 246.1 419 49.2
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 6.8e-62 242.3 293 48.5
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 8.8e-62 241.9 375 50.4
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 3.4e-61 240.0 294 51.7
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 4.4e-61 239.6 450 43.1
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 5.7e-61 239.2 399 49.1
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 7.5e-61 238.8 375 49.9
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 6.3e-60 235.7 417 46.0
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.1e-59 235.0 403 47.1
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 2.4e-59 233.8 398 47.5
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 3.5e-58 229.9 290 49.7
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 5.9e-58 229.2 240 53.8
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 3.8e-57 226.5 377 46.7
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 8.6e-57 225.3 421 46.1
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 7.2e-56 222.2 362 48.1
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 1.6e-55 221.1 365 47.7
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.1e-55 220.7 319 43.6
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.0e-54 218.4 394 46.7
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 1.8e-54 217.6 213 53.1
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 2.0e-53 214.2 220 53.2
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 4.4e-53 213.0 295 46.4
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 3.7e-52 209.9 190 58.4
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 3.1e-51 206.8 297 46.5
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.7e-49 201.1 316 43.4
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 8.6e-49 198.7 269 47.6
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.9e-48 197.6 214 50.0
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 3.6e-47 193.4 303 41.9
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 8.0e-47 192.2 357 42.0
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 4.0e-46 189.9 205 54.1
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.6e-45 187.2 342 43.9
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 5.8e-45 186.0 224 45.5
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 1.8e-43 181.0 295 43.4
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 2.8e-39 167.2 269 52.4
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 2.8e-39 167.2 226 45.6
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 2.7e-34 150.6 225 40.4
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 6.0e-34 149.4 239 41.0
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 1.3e-33 148.3 242 38.8
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 5.0e-33 146.4 293 36.2
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 1.1e-30 138.7 247 36.0
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 3.6e-23 113.6 151 49.0
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 1.9e-16 91.3 61 77.0
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 1.4e-14 85.1 79 60.8
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 2.9e-12 77.4 191 48.7
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.0e-09 68.9 269 27.1


User provided reference genes

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