Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 6.2e-168 594.0 284 100.0
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 3.3e-145 518.5 283 86.2
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 2.8e-144 515.4 281 86.5
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 4.8e-144 514.6 284 85.6
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 1.0e-141 506.9 284 83.8
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 1.3e-141 506.5 284 83.5
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 2.5e-140 502.3 281 84.7
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 1.6e-139 499.6 284 81.3
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 1.6e-139 499.6 284 81.0
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 2.1e-139 499.2 284 82.4
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 1.8e-138 496.1 284 82.4
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 3.0e-138 495.4 285 80.0
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 6.7e-138 494.2 284 80.3
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 1.5e-137 493.0 285 82.5
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.5e-137 493.0 284 81.3
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 4.3e-137 491.5 291 79.0
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 4.3e-137 491.5 284 82.4
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 9.7e-137 490.3 291 79.0
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 9.7e-137 490.3 284 82.0
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 1.7e-136 489.6 284 82.0
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 4.8e-136 488.0 284 79.9
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 4.1e-135 485.0 285 80.0
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 6.9e-135 484.2 284 81.3
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 1.2e-134 483.4 281 82.9
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 2.6e-134 482.3 296 78.4
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 2.6e-134 482.3 284 80.3
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 7.7e-134 480.7 287 79.4
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 1.3e-133 479.9 282 82.3
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 2.2e-133 479.2 284 79.2
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 2.9e-133 478.8 284 80.6
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 6.5e-133 477.6 284 80.3
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.1e-132 476.9 285 78.9
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.5e-132 474.6 284 79.6
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 2.1e-131 472.6 284 78.9
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 2.1e-131 472.6 285 77.2
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 3.6e-131 471.9 285 76.5
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 6.1e-131 471.1 276 82.6
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 7.9e-131 470.7 285 77.5
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 1.3e-128 463.4 288 77.4
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 2.2e-128 462.6 310 73.2
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 2.8e-128 462.2 284 75.4
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 3.7e-128 461.8 284 77.1
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.1e-127 460.3 299 75.3
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.4e-127 459.9 285 76.5
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.1e-127 458.4 285 77.5
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 4.1e-127 458.4 348 65.8
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 5.3e-127 458.0 285 77.2
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 2.0e-126 456.1 285 75.8
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 2.6e-126 455.7 285 77.9
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 2.6e-126 455.7 285 75.8
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 2.6e-126 455.7 285 75.8
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.5e-126 454.9 285 77.2
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 2.2e-125 452.6 285 75.4
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 2.2e-125 452.6 285 75.1
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 2.9e-125 452.2 337 68.0
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 6.5e-125 451.1 284 76.8
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 1.5e-124 449.9 285 75.8
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 4.2e-124 448.4 285 74.7
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 4.2e-124 448.4 285 74.0
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 9.4e-124 447.2 285 74.7
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 2.1e-123 446.0 285 75.4
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 2.7e-123 445.7 285 74.4
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 3.6e-123 445.3 285 75.8
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 3.6e-123 445.3 285 75.4
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 6.1e-123 444.5 285 74.4
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 6.1e-123 444.5 285 74.7
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 4.8e-120 434.9 284 73.9
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 8.2e-120 434.1 285 73.7
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 2.3e-114 416.0 310 65.8
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 4.8e-112 408.3 282 69.9
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 2.0e-110 402.9 282 67.4
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 7.7e-110 401.0 284 69.7
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 5.0e-109 398.3 286 67.1
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 4.2e-108 395.2 410 54.6
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 2.1e-107 392.9 285 65.3
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 3.0e-106 389.0 252 76.6
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 4.4e-105 385.2 233 78.1
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 5.7e-105 384.8 228 81.6
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.8e-104 382.5 281 69.4
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 1.9e-100 369.8 244 73.8
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 1.4e-95 353.6 303 61.7
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 1.1e-92 344.0 208 77.9
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 4.7e-91 338.6 196 81.1
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 4.9e-88 328.6 199 80.4
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 2.3e-85 319.7 239 65.3
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 5.6e-84 315.1 181 83.4
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 2.1e-83 313.2 210 71.9
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 7.5e-81 304.7 230 64.8
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 1.4e-74 283.9 242 59.1
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 9.2e-71 271.2 281 44.5
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 1.6e-70 270.4 287 48.8
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 3.5e-70 269.2 239 57.3
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 2.5e-68 263.1 279 46.2
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 1.8e-66 256.9 279 47.7
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 5.3e-58 228.8 129 84.5
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 9.3e-47 191.4 228 47.8
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 1.2e-38 164.5 88 84.1
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 7.9e-38 161.8 284 36.3
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 3.3e-36 156.4 304 35.2
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 1.1e-28 131.3 87 70.1
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 2.6e-25 120.2 124 49.2
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 7.9e-22 108.6 80 67.5
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 1.3e-19 101.3 290 28.3
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 1.7e-19 100.9 192 32.3
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 2.6e-17 93.6 72 55.6
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.9e-17 92.4 54 75.9
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 7.7e-17 92.0 53 77.4
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 3.8e-16 89.7 45 88.9
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 8.8e-13 78.6 42 78.6
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-09 66.2 218 28.0
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 7.2e-07 58.9 38 73.7
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 7.2e-07 58.9 38 73.7
C01p38650 Brassica napus HOM05D000595 ORTHO05D008454 8.0e-06 55.5 27 92.6


User provided reference genes

Program Settings