Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.3e-93 346.3 165 100.0
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 1.9e-76 289.3 156 87.8
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 2.5e-68 262.3 168 73.8
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 2.5e-68 262.3 156 80.1
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 3.3e-68 261.9 168 75.6
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 3.3e-68 261.9 166 75.9
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 5.6e-68 261.2 169 77.5
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 1.6e-67 259.6 168 74.4
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 2.8e-67 258.8 168 73.2
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 4.7e-67 258.1 156 78.2
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 1.4e-66 256.5 167 73.7
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 1.8e-66 256.1 168 73.8
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 2.3e-66 255.8 169 73.4
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 6.8e-66 254.2 169 71.6
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 8.9e-66 253.8 146 80.1
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 8.9e-66 253.8 168 72.6
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 1.2e-65 253.4 143 82.5
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 2.6e-65 252.3 138 82.6
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 2.6e-65 252.3 160 75.6
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 3.4e-65 251.9 156 76.3
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 5.7e-65 251.1 169 74.0
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 5.7e-65 251.1 156 73.7
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.9e-64 248.8 169 69.8
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 3.7e-64 248.4 138 81.2
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 4.9e-64 248.1 138 82.6
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 6.4e-64 247.7 138 82.6
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 6.4e-64 247.7 155 76.8
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 1.8e-63 246.1 137 81.8
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 1.8e-63 246.1 137 81.8
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.8e-63 246.1 155 73.5
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 2.4e-63 245.7 155 73.5
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 2.4e-63 245.7 146 76.7
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 3.2e-63 245.4 138 81.9
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 4.1e-63 245.0 170 71.2
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 9.2e-63 243.8 148 77.0
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 9.2e-63 243.8 160 73.1
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 9.2e-63 243.8 155 71.6
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 1.2e-62 243.4 143 79.0
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 2.7e-62 242.3 139 78.4
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 3.5e-62 241.9 138 79.7
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.5e-62 241.9 168 67.3
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.5e-62 241.9 165 68.5
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 1.0e-61 240.4 148 75.7
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 1.0e-61 240.4 138 79.7
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 1.7e-61 239.6 156 71.2
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 1.7e-61 239.6 138 81.2
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 1.7e-61 239.6 172 66.3
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 1.7e-61 239.6 148 75.0
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 2.3e-61 239.2 155 72.3
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 3.9e-61 238.4 138 79.0
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 3.9e-61 238.4 138 79.0
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 8.6e-61 237.3 138 78.3
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 8.6e-61 237.3 137 78.1
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.1e-60 236.9 155 72.3
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.1e-60 236.9 156 73.7
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 1.1e-60 236.9 137 77.4
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 3.3e-60 235.3 178 64.0
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 7.3e-60 234.2 139 76.3
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 7.3e-60 234.2 137 77.4
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 7.3e-60 234.2 155 72.3
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 1.2e-59 233.4 137 75.2
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.2e-59 233.4 156 71.2
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 1.6e-59 233.0 137 79.6
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 4.7e-59 231.5 137 75.2
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 8.0e-59 230.7 139 78.4
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 1.4e-58 229.9 135 77.8
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.8e-58 229.6 137 73.7
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 1.8e-58 229.6 124 83.1
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 5.2e-58 228.0 160 68.1
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 2.6e-57 225.7 125 82.4
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 7.5e-57 224.2 139 74.1
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 1.9e-55 219.5 142 71.1
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 3.2e-55 218.8 140 72.9
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 1.0e-53 213.8 138 72.5
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 1.9e-52 209.5 125 76.8
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 1.6e-51 206.5 127 73.2
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 1.6e-51 206.5 259 46.3
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.7e-51 204.9 121 73.6
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 2.6e-49 199.1 168 62.5
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 3.0e-45 185.7 139 64.0
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 2.5e-44 182.6 108 77.8
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 2.3e-42 176.0 123 68.3
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 8.4e-40 167.5 132 64.4
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 4.1e-39 165.2 128 57.8
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 6.0e-38 161.4 86 87.2
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 6.6e-37 157.9 125 56.0
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 1.6e-35 153.3 81 82.7
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 6.2e-35 151.4 81 82.7
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.1e-34 150.6 81 81.5
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.4e-34 149.4 81 82.7
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 4.0e-34 148.7 153 49.0
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 2.7e-30 136.0 124 50.8
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 2.3e-29 132.9 114 56.1
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-29 132.9 123 50.4
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 5.3e-18 95.1 143 38.5
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 2.0e-17 93.2 89 52.8
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 2.0e-17 93.2 65 64.6
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 2.3e-13 79.7 106 36.8
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 4.3e-12 75.5 128 33.6
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 2.1e-11 73.2 141 31.9
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 4.8e-11 72.0 48 68.8
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 6.2e-11 71.6 38 84.2
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.1e-10 70.9 37 86.5
arahy.Tifrunner.gnm1.ann1.JG4R8Z Arachis hypogaea HOM05D034686 ORTHO05D082558 4.6e-06 55.5 43 58.1


User provided reference genes

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