Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G112600 Carya illinoinensis HOM05D000826 ORTHO05D006448 1.0e-37 159.5 76 100.0
CiPaw.09G121700 Carya illinoinensis HOM05D000826 ORTHO05D006448 1.5e-20 102.4 60 83.3
Haze_05627 Corylus avellana HOM05D000826 ORTHO05D006448 7.5e-20 100.1 64 73.4
Cfa000923 Carpinus fangiana HOM05D000826 ORTHO05D006448 3.7e-19 97.8 60 76.7
Prupe.4G083300 Prunus persica HOM05D000826 ORTHO05D006448 4.9e-19 97.4 60 76.7
CiPaw.10G090200 Carya illinoinensis HOM05D000826 ORTHO05D006448 6.4e-19 97.1 73 64.4
CSS0028491 Camellia sinensis var. sinensis HOM05D000826 ORTHO05D006448 4.1e-18 94.4 66 68.2
CSS0030893 Camellia sinensis var. sinensis HOM05D000826 ORTHO05D006448 4.1e-18 94.4 66 68.2
Dinv21557 Davidia involucrata HOM05D000826 ORTHO05D006448 4.1e-18 94.4 60 76.7
MD10G1260100 Malus domestica HOM05D000826 ORTHO05D006448 5.4e-18 94.0 60 75.0
Manes.15G123600 Manihot esculenta HOM05D000826 ORTHO05D006448 5.4e-18 94.0 60 75.0
Dinv32232 Davidia involucrata HOM05D000826 ORTHO05D006448 9.2e-18 93.2 60 73.3
Hund21539 Selenicereus undatus HOM05D000826 ORTHO05D006448 1.2e-17 92.8 60 68.3
Manes.17G072300 Manihot esculenta HOM05D000826 ORTHO05D006448 1.6e-17 92.4 60 75.0
RcHm_v2.0_Chr5g0014471 Rosa chinensis HOM05D000826 ORTHO05D006448 1.6e-17 92.4 60 71.7
CSS0034369 Camellia sinensis var. sinensis HOM05D000826 ORTHO05D006448 2.1e-17 92.0 60 73.3
MD05G1281300 Malus domestica HOM05D000826 ORTHO05D006448 2.1e-17 92.0 60 71.7
Sc05g0006070 Simmondsia chinensis HOM05D000826 ORTHO05D006448 2.1e-17 92.0 58 74.1
CSS0044711 Camellia sinensis var. sinensis HOM05D000826 ORTHO05D006448 2.7e-17 91.7 60 73.3
Gohir.D06G143500 Gossypium hirsutum HOM05D000826 ORTHO05D006448 2.7e-17 91.7 60 70.0
Nitab4.5_0005094g0040 Nicotiana tabacum HOM05D000826 ORTHO05D006448 2.7e-17 91.7 60 71.7
TAR627G0038 Trochodendron aralioides HOM05D000826 ORTHO05D006448 2.7e-17 91.7 60 73.3
BraA06t27476Z Brassica rapa HOM05D000826 ORTHO05D006448 3.5e-17 91.3 60 71.7
TWI09G1644 Tripterygium wilfordii HOM05D000826 ORTHO05D006448 3.5e-17 91.3 67 67.2
Actinidia39586 Actinidia chinensis HOM05D000826 ORTHO05D006448 4.6e-17 90.9 58 74.1
A06p46110 Brassica napus HOM05D000826 ORTHO05D006448 4.6e-17 90.9 60 71.7
Eucgr.D00287 Eucalyptus grandis HOM05D000826 ORTHO05D006448 4.6e-17 90.9 60 71.7
Thecc.06G147800 Theobroma cacao HOM05D000826 ORTHO05D006448 4.6e-17 90.9 60 70.0
CSS0017067 Camellia sinensis var. sinensis HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 71.7
Cpa.g.sc17.2 Carica papaya HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 71.7
Cc00_g12600 Coffea canephora HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 71.7
Gohir.A06G138700 Gossypium hirsutum HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 68.3
Lj2A320T45 Lonicera japonica HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 70.0
Nitab4.5_0006038g0020 Nicotiana tabacum HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 70.0
PGR083G1867 Punica granatum HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 70.0
QL05p055819 Quercus lobata HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 71.7
SalBow8G2423 Salvia bowleyana HOM05D000826 ORTHO05D006448 6.0e-17 90.5 60 71.7
ClCG03G006680 Citrullus lanatus HOM05D000826 ORTHO05D006448 7.8e-17 90.1 60 68.3
Gorai.010G167200 Gossypium raimondii HOM05D000826 ORTHO05D006448 7.8e-17 90.1 60 68.3
GSVIVG01021525001 Vitis vinifera HOM05D000826 ORTHO05D006448 7.8e-17 90.1 59 72.9
COL.COLO4_31038 Corchorus olitorius HOM05D000826 ORTHO05D006448 1.0e-16 89.7 60 68.3
Migut.M00893 Erythranthe guttata HOM05D000826 ORTHO05D006448 1.0e-16 89.7 60 70.0
Thhalv10000861m.g Eutrema salsugineum HOM05D000826 ORTHO05D006448 1.0e-16 89.7 60 71.7
Sopen08g010730 Solanum pennellii HOM05D000826 ORTHO05D006448 1.0e-16 89.7 60 70.0
PGSC0003DMG400029872 Solanum tuberosum HOM05D000826 ORTHO05D006448 1.0e-16 89.7 60 70.0
FvH4_3g05240 Fragaria vesca HOM05D000826 ORTHO05D006448 1.7e-16 89.0 60 70.0
FAN11G2713 Fragaria x ananassa HOM05D000826 ORTHO05D006448 1.7e-16 89.0 60 70.0
BcaB07g30849 Brassica carinata HOM05D000826 ORTHO05D006448 2.3e-16 88.6 60 70.0
BcaC06g31494 Brassica carinata HOM05D000826 ORTHO05D006448 2.3e-16 88.6 60 70.0
CARHR175610 Cardamine hirsuta HOM05D000826 ORTHO05D006448 2.3e-16 88.6 60 70.0
FAN16G3098 Fragaria x ananassa HOM05D000826 ORTHO05D006448 2.3e-16 88.6 60 68.3
FAN21G2333 Fragaria x ananassa HOM05D000826 ORTHO05D006448 2.3e-16 88.6 60 68.3
Potri.011G082800 Populus trichocarpa HOM05D000826 ORTHO05D006448 2.3e-16 88.6 60 71.7
Sed0003877 Sechium edule HOM05D000826 ORTHO05D006448 2.3e-16 88.6 60 68.3
QL05p057206 Quercus lobata HOM05D000826 ORTHO05D006448 3.0e-16 88.2 60 73.3
Sp2g11040 Schrenkiella parvula HOM05D000826 ORTHO05D006448 3.0e-16 88.2 58 72.4
Sc05g0006080 Simmondsia chinensis HOM05D000826 ORTHO05D006448 3.0e-16 88.2 58 70.7
AL8G12290 Arabidopsis lyrata HOM05D000826 ORTHO05D006448 3.9e-16 87.8 60 68.3
AT5G46180 Arabidopsis thaliana HOM05D000826 ORTHO05D006448 3.9e-16 87.8 60 68.3
Carub.0008s0174 Capsella rubella HOM05D000826 ORTHO05D006448 3.9e-16 87.8 60 68.3
AUR62002697 Chenopodium quinoa HOM05D000826 ORTHO05D006448 3.9e-16 87.8 60 70.0
Solyc08g048450.4 Solanum lycopersicum HOM05D000826 ORTHO05D006448 3.9e-16 87.8 60 68.3
Duzib160G0889 Durio zibethinus HOM05D000826 ORTHO05D006448 5.1e-16 87.4 58 69.0
THA.LOC104798396 Tarenaya hassleriana HOM05D000826 ORTHO05D006448 5.1e-16 87.4 60 68.3
Atru.chr10.1167 Acer truncatum HOM05D000826 ORTHO05D006448 6.6e-16 87.0 58 70.7
C07p29380 Brassica napus HOM05D000826 ORTHO05D006448 6.6e-16 87.0 60 68.3
BolC7t43479H Brassica oleracea HOM05D000826 ORTHO05D006448 6.6e-16 87.0 60 68.3
vmacro03342 Vaccinium macrocarpon HOM05D000826 ORTHO05D006448 6.6e-16 87.0 60 68.3
EL10Ac8g19645 Beta vulgaris HOM05D000826 ORTHO05D006448 8.6e-16 86.7 60 70.0
Nn3g20410 Nelumbo nucifera HOM05D000826 ORTHO05D006448 8.6e-16 86.7 60 70.0
Ciclev10015647m.g Citrus clementina HOM05D000826 ORTHO05D006448 1.1e-15 86.3 65 63.1
Hma1.2p1_0020F.1_g014180 Hydrangea macrophylla HOM05D000826 ORTHO05D006448 1.1e-15 86.3 60 68.3
Hma1.2p1_0020F.1_g014190 Hydrangea macrophylla HOM05D000826 ORTHO05D006448 1.1e-15 86.3 60 68.3
MSTRG.7501 Avicennia marina HOM05D000826 ORTHO05D006448 1.9e-15 85.5 60 66.7
CAN.G42.14 Capsicum annuum HOM05D000826 ORTHO05D006448 1.9e-15 85.5 60 66.7
MELO3C002752.2 Cucumis melo HOM05D000826 ORTHO05D006448 1.9e-15 85.5 60 65.0
CsaV3_1G004640 Cucumis sativus L. HOM05D000826 ORTHO05D006448 1.9e-15 85.5 60 65.0
Lsat_1_v5_gn_4_29681 Lactuca sativa HOM05D000826 ORTHO05D006448 1.9e-15 85.5 60 65.0
DCAR_007881 Daucus carota HOM05D000826 ORTHO05D006448 2.5e-15 85.1 60 68.3
Sabra11G0065900 Salix brachista HOM05D000826 ORTHO05D006448 2.5e-15 85.1 60 70.0
Aa31LG9G6730 Aethionema arabicum HOM05D000826 ORTHO05D006448 3.3e-15 84.7 59 67.8
CANSAT35G1538 Cannabis sativa HOM05D000826 ORTHO05D006448 3.3e-15 84.7 60 63.3
Lalb_Chr18g0054071 Lupinus albus HOM05D000826 ORTHO05D006448 3.3e-15 84.7 61 60.7
Rhsim13G0115600 Rhododendron simsii HOM05D000826 ORTHO05D006448 3.3e-15 84.7 60 66.7
BcaC04g21719 Brassica carinata HOM05D000826 ORTHO05D006448 5.6e-15 84.0 62 66.1
C09p28310 Brassica napus HOM05D003959 ORTHO05D001488 5.6e-15 84.0 62 66.1
ECA234G1332 Erigeron canadensis HOM05D000826 ORTHO05D006448 5.6e-15 84.0 60 61.7
SGA_v2.0_scaffold1G00195 Striga asiatica HOM05D000826 ORTHO05D006448 9.5e-15 83.2 60 63.3
Glyma.19G189900 Glycine max HOM05D000826 ORTHO05D006448 1.6e-14 82.4 70 50.0
HanXRQChr03g0090071 Helianthus annuus HOM05D000826 ORTHO05D006448 1.6e-14 82.4 60 61.7
CDE01G0123 Ceratophyllum demersum HOM05D000826 ORTHO05D006448 2.1e-14 82.0 60 63.3
Sed0026801 Sechium edule HOM05D000826 ORTHO05D006448 2.1e-14 82.0 60 63.3
Oeu040098.1 Olea europaea HOM05D000826 ORTHO05D006448 2.8e-14 81.6 60 65.0
Ah.09g232510 Amaranthus hybridus HOM05D000826 ORTHO05D006448 3.6e-14 81.3 60 61.7
MBI02_g03072_MAGBIO Magnolia biondii HOM05D000826 ORTHO05D006448 4.7e-14 80.9 60 65.0
ATR1098G046 Amborella trichopoda HOM05D000826 ORTHO05D006448 8.1e-14 80.1 60 63.3
Aqoxy1G01679 Aquilegia oxysepala HOM05D000826 ORTHO05D006448 8.1e-14 80.1 58 63.8
arahy.Tifrunner.gnm1.ann1.ATM76I Arachis hypogaea HOM05D000826 ORTHO05D006448 8.1e-14 80.1 58 62.1
arahy.Tifrunner.gnm1.ann1.F3DNME Arachis hypogaea HOM05D000826 ORTHO05D006448 8.1e-14 80.1 58 62.1
arahy.Tifrunner.gnm1.ann1.Z6DGE6 Arachis hypogaea HOM05D000826 ORTHO05D006448 8.1e-14 80.1 58 62.1
CDE12G0391 Ceratophyllum demersum HOM05D000826 ORTHO05D006448 1.1e-13 79.7 59 64.4
Os03g0643300 Oryza sativa ssp. japonica HOM05D000826 ORTHO05D006448 3.1e-13 78.2 60 61.7
Glyma.17G184700 Glycine max HOM05D007034 ORTHO05D006448 1.2e-12 76.3 68 50.0
PSO675G8347 Papaver somniferum HOM05D000826 ORTHO05D006448 2.0e-12 75.5 65 55.4
HPP92_014005 Vanilla planifolia HOM05D000029 ORTHO05D006448 2.0e-12 75.5 59 59.3
Zm00001eb050460 Zea mays HOM05D000826 ORTHO05D006448 2.0e-12 75.5 60 60.0
Glyma.05G141900 Glycine max HOM05D000826 ORTHO05D006448 4.4e-12 74.3 58 56.9
Phvul.002G180400 Phaseolus vulgaris HOM05D000826 ORTHO05D006448 5.8e-12 73.9 62 53.2
Lj4g0015055 Lotus japonicus HOM05D000826 ORTHO05D006448 1.7e-11 72.4 58 55.2
Glyma.08G097800 Glycine max HOM05D000826 ORTHO05D006448 2.2e-11 72.0 58 55.2
Lj4g0011938 Lotus japonicus HOM05D000826 ORTHO05D006448 8.4e-11 70.1 58 53.4
VMungo0251G0373 Vigna mungo HOM05D000826 ORTHO05D006448 8.4e-11 70.1 58 55.2
AagrBONN_evm.TU.Sc2ySwM_117.2020 Anthoceros agrestis HOM05D000826 ORTHO05D006448 1.1e-10 69.7 59 54.2
CBR_g34489 Chara braunii HOM05D000826 ORTHO05D006448 1.1e-10 69.7 65 49.2
Pp3c14_3770 Physcomitrium patens HOM05D000826 ORTHO05D006448 1.1e-10 69.7 64 50.0
SEGI_29053 Sequoiadendron giganteum HOM05D000826 ORTHO05D006448 1.4e-10 69.3 59 55.9
SMO119G0079 Selaginella moellendorffii HOM05D000826 ORTHO05D006448 2.4e-10 68.6 63 49.2
TPR.G13303 Trifolium pratense HOM05D000826 ORTHO05D006448 2.4e-10 68.6 58 55.2
Mapoly0003s0017 Marchantia polymorpha HOM05D000826 ORTHO05D006448 4.1e-10 67.8 66 47.0
Ca_18168_v3 Cicer arietinum L. HOM05D000826 ORTHO05D006448 2.1e-09 65.5 58 50.0
FAN16G2689 Fragaria x ananassa HOM05D000826 ORTHO05D006448 1.3e-08 62.8 40 70.0
BolC9t55707H Brassica oleracea HOM05D000826 ORTHO05D006448 1.9e-07 58.9 40 67.5


User provided reference genes

Program Settings