Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 1.4e-81 306.2 150 100.0
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 1.4e-30 136.7 144 57.6
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 3.9e-28 128.6 147 51.7
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 1.3e-26 123.6 145 48.3
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 3.7e-26 122.1 145 49.7
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 1.8e-25 119.8 147 46.3
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 2.4e-25 119.4 145 48.3
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 2.1e-21 106.3 146 44.5
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 2.7e-21 105.9 85 58.8
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 1.8e-20 103.2 85 57.6
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 1.8e-20 103.2 85 55.3
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 3.3e-19 99.0 142 47.9
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 7.4e-19 97.8 88 61.4
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 3.7e-18 95.5 87 54.0
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 4.8e-18 95.1 149 40.3
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 6.3e-18 94.7 86 54.7
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 1.1e-17 94.0 87 57.5
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 1.8e-17 93.2 91 53.8
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 9.0e-17 90.9 101 46.5
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 1.5e-16 90.1 90 50.0
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 2.6e-16 89.4 86 48.8
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 3.4e-16 89.0 87 51.7
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 1.0e-15 87.4 101 45.5
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 1.0e-15 87.4 148 39.9
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 1.3e-15 87.0 150 36.0
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 1.3e-15 87.0 91 53.8
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 1.7e-15 86.7 90 56.7
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 6.5e-15 84.7 148 38.5
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 3.2e-14 82.4 84 51.2
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 3.2e-14 82.4 78 52.6
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 2.1e-13 79.7 158 36.7
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.4e-09 67.0 79 49.4
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 1.4e-09 67.0 78 48.7


User provided reference genes

Program Settings