Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G090700 Carya illinoinensis HOM05D004479 ORTHO05D005597 5.4e-87 324.7 219 100.0
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 2.1e-70 269.6 220 80.9
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 1.0e-61 240.7 147 89.8
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 6.9e-58 228.0 215 73.0
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 7.6e-57 224.6 222 64.0
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 8.5e-56 221.1 224 65.2
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 3.2e-55 219.2 219 69.9
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 1.6e-54 216.9 206 64.1
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 3.6e-54 215.7 205 63.9
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 1.0e-53 214.2 221 65.2
Dinv37782 Davidia involucrata HOM05D004479 ORTHO05D005597 6.7e-53 211.5 217 65.4
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 6.7e-53 211.5 222 66.2
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 3.3e-52 209.1 225 62.7
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 7.4e-52 208.0 225 61.8
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 7.4e-52 208.0 221 58.4
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 4.8e-51 205.3 222 66.7
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 1.8e-50 203.4 225 59.1
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 1.8e-50 203.4 148 80.4
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 5.3e-50 201.8 149 79.9
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 6.9e-50 201.4 209 71.3
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 1.5e-49 200.3 225 64.0
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 2.6e-49 199.5 226 58.8
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 2.6e-49 199.5 211 62.1
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 7.7e-49 198.0 223 60.5
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 1.3e-48 197.2 203 68.5
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 5.0e-48 195.3 220 55.9
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 3.2e-47 192.6 148 69.6
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 4.2e-47 192.2 204 66.7
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 2.1e-46 189.9 205 62.4
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.0e-45 187.6 225 61.3
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 2.3e-45 186.4 153 73.9
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 7.4e-44 181.4 147 71.4
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 7.4e-44 181.4 147 71.4
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 4.1e-42 175.6 219 63.9
Aqoxy377s002 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 2.6e-41 172.9 148 64.9
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 3.4e-41 172.6 149 67.8
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 7.7e-41 171.4 209 53.6
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 7.7e-41 171.4 227 55.5
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.3e-40 170.6 177 59.3
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 1.7e-40 170.2 198 54.0
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 2.2e-40 169.9 221 52.9
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 1.1e-39 167.5 148 68.9
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 1.1e-39 167.5 168 73.8
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 1.9e-39 166.8 222 52.7
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 4.7e-38 162.2 206 52.9
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 1.4e-37 160.6 200 53.0
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 1.8e-37 160.2 197 54.8
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 3.9e-37 159.1 205 55.1
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 8.8e-37 157.9 197 60.4
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 1.1e-36 157.5 149 67.8
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 1.1e-36 157.5 220 61.8
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 1.5e-36 157.1 150 67.3
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 3.3e-36 156.0 215 46.0
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 3.3e-36 156.0 98 83.7
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 9.7e-36 154.5 148 62.2
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.3e-35 154.1 147 61.9
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 2.2e-35 153.3 234 50.4
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 3.7e-35 152.5 148 62.2
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 6.3e-35 151.8 148 62.8
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 1.1e-34 151.0 202 48.0
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 1.4e-34 150.6 224 51.8
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 1.4e-34 150.6 220 48.2
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 4.1e-34 149.1 202 55.0
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 7.0e-34 148.3 149 61.1
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 1.3e-32 144.1 220 46.8
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 8.5e-32 141.4 196 48.0
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 3.2e-31 139.4 126 61.9
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 3.6e-30 136.0 156 53.8
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 1.0e-29 134.4 172 54.1
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 1.0e-29 134.4 212 54.2
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 1.8e-29 133.7 222 45.9
Psat0s1227g0080 Pisum sativum HOM05D000020 ORTHO05D015801 2.3e-29 133.3 154 53.9
Cpa.g.sc155.18 Carica papaya HOM05D004479 ORTHO05D005597 5.2e-29 132.1 103 71.8
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 5.2e-29 132.1 144 54.9
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 2.6e-28 129.8 221 45.2
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 2.6e-28 129.8 179 49.7
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 5.7e-28 128.6 230 53.0
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 4.8e-27 125.6 145 64.1
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 1.4e-26 124.0 163 52.8
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 2.7e-25 119.8 212 61.8
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 2.7e-25 119.8 212 61.8
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 2.7e-25 119.8 212 61.8
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 2.2e-24 116.7 209 61.7
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 2.9e-24 116.3 210 61.0
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 2.9e-24 116.3 148 54.7
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 3.8e-24 115.9 232 42.2
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 8.5e-24 114.8 200 45.5
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 8.5e-24 114.8 221 40.3
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 1.1e-23 114.4 154 55.2
DCAR_030620 Daucus carota HOM05D004479 ORTHO05D005597 1.5e-23 114.0 100 70.0
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 2.5e-23 113.2 153 67.3
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 4.2e-23 112.5 162 50.6
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 4.2e-23 112.5 162 50.6
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 5.5e-23 112.1 150 53.3
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 9.4e-23 111.3 214 46.3
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.2e-22 110.9 144 50.0
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 6.1e-22 108.6 150 56.7
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 2.3e-21 106.7 126 54.8
FAN12G4029 Fragaria x ananassa HOM05D002474 ORTHO05D007142 3.0e-21 106.3 104 65.4
Psat7g008520 Pisum sativum HOM05D004479 ORTHO05D005597 1.5e-20 104.0 75 73.3
Haze_16261 Corylus avellana HOM05D004479 ORTHO05D029161 7.5e-20 101.7 68 86.8
Psat0s2660g0040 Pisum sativum HOM05D000020 ORTHO05D015801 8.3e-19 98.2 83 62.7
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 2.0e-17 93.6 145 55.9
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 2.7e-17 93.2 211 40.3
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 1.0e-16 91.3 252 34.9
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 1.3e-16 90.9 133 48.9
Psat3g045760 Pisum sativum HOM05D004392 ORTHO05D004846 2.2e-16 90.1 68 67.6
Psat0s1227g0040 Pisum sativum HOM05D000280 ORTHO05D015801 9.8e-12 74.7 52 73.1
COL.COLO4_31578 Corchorus olitorius HOM05D001810 ORTHO05D005662 2.2e-11 73.6 52 78.8
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 2.7e-09 66.6 44 84.1
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 1.0e-08 64.7 44 77.3
Lj5C22T9 Lonicera japonica HOM05D004479 ORTHO05D029161 2.9e-08 63.2 69 69.6
Nitab4.5_0005739g0060 Nicotiana tabacum HOM05D004479 ORTHO05D029161 5.0e-08 62.4 104 47.1
Peaxi162Scf00038g02640 Petunia axillaris HOM05D004479 ORTHO05D029161 1.2e-06 57.8 67 55.2


User provided reference genes

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