Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G084100 Carya illinoinensis HOM05D000264 ORTHO05D000152 2.4e-65 251.9 119 100.0
CiPaw.01G086200 Carya illinoinensis HOM05D000264 ORTHO05D000152 4.5e-27 124.8 83 73.5
CiPaw.01G086400 Carya illinoinensis HOM05D000264 ORTHO05D000152 5.0e-26 121.3 83 72.3
CiPaw.01G086700 Carya illinoinensis HOM05D000264 ORTHO05D000152 5.0e-26 121.3 83 72.3
CiPaw.01G086900 Carya illinoinensis HOM05D000264 ORTHO05D000152 5.0e-26 121.3 83 72.3
CiPaw.01G084500 Carya illinoinensis HOM05D000264 ORTHO05D000152 1.4e-25 119.8 83 72.3
CiPaw.01G084000 Carya illinoinensis HOM05D000264 ORTHO05D000152 2.1e-24 115.9 84 70.2
CiPaw.01G083700 Carya illinoinensis HOM05D000264 ORTHO05D000152 4.6e-24 114.8 83 72.3
CiPaw.01G084400 Carya illinoinensis HOM05D000264 ORTHO05D000152 4.6e-24 114.8 83 72.3
CiPaw.01G084300 Carya illinoinensis HOM05D000264 ORTHO05D000152 4.3e-22 108.2 83 67.5
CiPaw.08G106100 Carya illinoinensis HOM05D000264 ORTHO05D000152 1.5e-19 99.8 83 66.3
CiPaw.01G049800 Carya illinoinensis HOM05D000264 ORTHO05D000152 9.4e-17 90.5 77 63.6
CiPaw.12G052300 Carya illinoinensis HOM05D000264 ORTHO05D000152 3.0e-15 85.5 80 57.5
CiPaw.12G052000 Carya illinoinensis HOM05D000264 ORTHO05D000152 6.3e-13 77.8 81 51.9
CiPaw.01G190700 Carya illinoinensis HOM05D000264 ORTHO05D000152 1.5e-11 73.2 84 50.0
Haze_11286 Corylus avellana HOM05D000264 ORTHO05D000152 9.4e-09 63.9 69 52.2
Dinv09002 Davidia involucrata HOM05D000264 ORTHO05D000152 9.4e-09 63.9 82 47.6
QL10p054110 Quercus lobata HOM05D000264 ORTHO05D000152 9.4e-09 63.9 61 52.5
Cfa021568 Carpinus fangiana HOM05D000264 ORTHO05D000152 1.2e-08 63.5 82 43.9
Haze_18351 Corylus avellana HOM05D000264 ORTHO05D000152 2.1e-08 62.8 64 50.0
QL10p054050 Quercus lobata HOM05D000264 ORTHO05D000152 2.1e-08 62.8 83 43.4
Dinv44626 Davidia involucrata HOM05D000264 ORTHO05D000152 2.7e-08 62.4 82 47.6
Hma1.2p1_1276F.1_g272240 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 2.7e-08 62.4 53 58.5
Cfa008384 Carpinus fangiana HOM05D000264 ORTHO05D000152 4.7e-08 61.6 80 43.8
Haze_18348 Corylus avellana HOM05D000264 ORTHO05D000152 4.7e-08 61.6 65 50.8
Cfa008383 Carpinus fangiana HOM05D000264 ORTHO05D000152 6.1e-08 61.2 51 56.9
Haze_11289 Corylus avellana HOM05D000264 ORTHO05D000152 6.1e-08 61.2 51 56.9
Haze_11293 Corylus avellana HOM05D000264 ORTHO05D000152 6.1e-08 61.2 51 56.9
Haze_11295 Corylus avellana HOM05D000264 ORTHO05D000152 6.1e-08 61.2 56 55.4
Hma1.2p1_1193F.1_g265640 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 6.1e-08 61.2 53 56.6
Cfa008447 Carpinus fangiana HOM05D000264 ORTHO05D000152 7.9e-08 60.8 51 56.9
CSS0044576 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.0e-07 60.5 54 51.9
Ciclev10006866m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.0e-07 60.5 82 41.5
Haze_11291 Corylus avellana HOM05D000264 ORTHO05D000152 1.0e-07 60.5 65 49.2
Dinv44628 Davidia involucrata HOM05D000264 ORTHO05D000152 1.0e-07 60.5 77 49.4
GSVIVG01020905001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.0e-07 60.5 83 42.2
Cfa006697 Carpinus fangiana HOM05D000264 ORTHO05D000152 1.8e-07 59.7 51 54.9
Ciclev10019517m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.8e-07 59.7 65 47.7
Ciclev10024428m.g Citrus clementina HOM05D000264 ORTHO05D000152 1.8e-07 59.7 65 47.7
Dinv14027 Davidia involucrata HOM05D000264 ORTHO05D000152 1.8e-07 59.7 69 46.4
FvH4_1g10390 Fragaria vesca HOM05D000264 ORTHO05D000152 1.8e-07 59.7 67 49.3
Hma1.2p1_1193F.1_g265580 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.8e-07 59.7 53 56.6
Lj3A790T26 Lonicera japonica HOM05D000264 ORTHO05D000152 1.8e-07 59.7 85 40.0
MD02G1116900 Malus domestica HOM05D000264 ORTHO05D000152 1.8e-07 59.7 79 40.5
Prupe.7G182400 Prunus persica HOM05D000264 ORTHO05D000152 1.8e-07 59.7 58 55.2
RcHm_v2.0_Chr2g0097241 Rosa chinensis HOM05D000264 ORTHO05D000152 2.3e-07 59.3 72 43.1
Cfa008435 Carpinus fangiana HOM05D000264 ORTHO05D000152 3.0e-07 58.9 69 46.4
Duzib212G0720 Durio zibethinus HOM05D000264 ORTHO05D000152 3.0e-07 58.9 81 43.2
Glyma.08G079800 Glycine max HOM05D000264 ORTHO05D000152 3.0e-07 58.9 98 36.7
CSS0002954 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 5.1e-07 58.2 65 50.8
CSS0044717 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 5.1e-07 58.2 65 50.8
Hma1.2p1_1193F.1_g265581 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 5.1e-07 58.2 83 42.2
QL10p054374 Quercus lobata HOM05D000264 ORTHO05D000152 5.1e-07 58.2 60 48.3
CSS0002232 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 6.7e-07 57.8 79 39.2
Dinv14029 Davidia involucrata HOM05D000264 ORTHO05D000152 6.7e-07 57.8 53 56.6
Duzib035G0001 Durio zibethinus HOM05D000264 ORTHO05D000152 6.7e-07 57.8 81 43.2
Duzib102G0001 Durio zibethinus HOM05D000264 ORTHO05D000152 6.7e-07 57.8 81 43.2
Lj3A780G47 Lonicera japonica HOM05D000264 ORTHO05D000152 6.7e-07 57.8 84 39.3
Prupe.7G182300 Prunus persica HOM05D000264 ORTHO05D000152 6.7e-07 57.8 82 45.1
RcHm_v2.0_Chr7g0237491 Rosa chinensis HOM05D000264 ORTHO05D000152 6.7e-07 57.8 65 44.6
Ciclev10024345m.g Citrus clementina HOM05D000264 ORTHO05D000152 8.8e-07 57.4 65 46.2
Dinv06866 Davidia involucrata HOM05D000264 ORTHO05D000152 8.8e-07 57.4 70 48.6
Dinv29924 Davidia involucrata HOM05D000264 ORTHO05D000152 8.8e-07 57.4 56 55.4
Actinidia08291 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.1e-06 57.0 51 54.9
Duzib151G0730 Durio zibethinus HOM05D000264 ORTHO05D000152 1.1e-06 57.0 51 52.9
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.5e-06 56.6 56 55.4
Lj3A718T89 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-06 56.6 85 38.8
Lj3A793G38 Lonicera japonica HOM05D000264 ORTHO05D000152 1.5e-06 56.6 81 40.7
Haze_11287 Corylus avellana HOM05D000264 ORTHO05D000152 2.0e-06 56.2 65 47.7
Dinv29918 Davidia involucrata HOM05D000264 ORTHO05D000152 2.0e-06 56.2 51 54.9
Duzib212G0789 Durio zibethinus HOM05D000264 ORTHO05D000152 2.0e-06 56.2 80 42.5
MD07G1083500 Malus domestica HOM05D000264 ORTHO05D000152 2.0e-06 56.2 50 56.0
arahy.Tifrunner.gnm1.ann1.98V0PV Arachis hypogaea HOM05D000992 ORTHO05D006704 2.6e-06 55.8 53 47.2
arahy.Tifrunner.gnm1.ann1.U5NZWJ Arachis hypogaea HOM05D000992 ORTHO05D006704 2.6e-06 55.8 53 47.2
Duzib212G0462 Durio zibethinus HOM05D000264 ORTHO05D000152 2.6e-06 55.8 80 42.5
Duzib212G0653 Durio zibethinus HOM05D000264 ORTHO05D000152 2.6e-06 55.8 80 42.5
Thecc.10G061700 Theobroma cacao HOM05D000264 ORTHO05D000152 2.6e-06 55.8 67 44.8
GSVIVG01001636001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.6e-06 55.8 82 41.5
Dinv14025 Davidia involucrata HOM05D000001 ORTHO05D000003 3.3e-06 55.5 41 63.4
Lj3A730T43 Lonicera japonica HOM05D000264 ORTHO05D000152 3.3e-06 55.5 53 52.8
Actinidia04483 Actinidia chinensis HOM05D000264 ORTHO05D000152 4.4e-06 55.1 54 51.9
CANSAT64G1402 Cannabis sativa HOM05D000264 ORTHO05D000152 4.4e-06 55.1 81 39.5
Duzib035G0003 Durio zibethinus HOM05D000264 ORTHO05D000152 4.4e-06 55.1 51 52.9
FAN23G1791 Fragaria x ananassa HOM05D000264 ORTHO05D000152 4.4e-06 55.1 70 42.9
FAN26G1085 Fragaria x ananassa HOM05D000264 ORTHO05D000152 4.4e-06 55.1 63 47.6
RcHm_v2.0_Chr3g0483541 Rosa chinensis HOM05D000264 ORTHO05D000152 4.4e-06 55.1 54 50.0
Actinidia04481 Actinidia chinensis HOM05D000264 ORTHO05D000152 5.7e-06 54.7 54 51.9
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 5.7e-06 54.7 50 56.0
CAN.G694.57 Capsicum annuum HOM05D000264 ORTHO05D000152 5.7e-06 54.7 54 51.9
Ciclev10007078m.g Citrus clementina HOM05D000264 ORTHO05D000152 5.7e-06 54.7 54 46.3
FvH4_1g12870 Fragaria vesca HOM05D000264 ORTHO05D000152 5.7e-06 54.7 57 47.4
MD02G1014100 Malus domestica HOM05D001352 ORTHO05D000152 5.7e-06 54.7 51 51.0
CAN.G449.70 Capsicum annuum HOM05D000264 ORTHO05D000152 7.4e-06 54.3 79 39.2
Dinv08720 Davidia involucrata HOM05D000264 ORTHO05D000152 7.4e-06 54.3 41 61.0
Hma1.2p1_1193F.1_g265650 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 7.4e-06 54.3 55 49.1
Peaxi162Scf00071g00936 Petunia axillaris HOM05D000264 ORTHO05D000152 7.4e-06 54.3 54 51.9
QL10p052455 Quercus lobata HOM05D000264 ORTHO05D000152 7.4e-06 54.3 41 58.5
GSVIVG01013597001 Vitis vinifera HOM05D000264 ORTHO05D000152 7.4e-06 54.3 83 41.0
Dinv14030 Davidia involucrata HOM05D000264 ORTHO05D000152 9.7e-06 53.9 46 56.5
Dinv29923 Davidia involucrata HOM05D000264 ORTHO05D000152 9.7e-06 53.9 86 44.2
Hma1.2p1_1193F.1_g265570 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 9.7e-06 53.9 68 45.6
Lj3C731T3 Lonicera japonica HOM05D000264 ORTHO05D000152 9.7e-06 53.9 50 54.0
Peaxi162Scf00156g01012 Petunia axillaris HOM05D000264 ORTHO05D000152 9.7e-06 53.9 79 38.0
GSVIVG01010727001 Vitis vinifera HOM05D000264 ORTHO05D000152 9.7e-06 53.9 84 36.9
GSVIVG01020895001 Vitis vinifera HOM05D000264 ORTHO05D000152 9.7e-06 53.9 87 40.2


User provided reference genes

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