Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 4.5e-21 103.6 50 100.0
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 4.1e-14 80.5 52 75.0
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 4.1e-14 80.5 50 74.0
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 5.3e-14 80.1 52 71.2
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 9.1e-14 79.3 51 72.5
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 1.5e-13 78.6 52 73.1
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 3.4e-13 77.4 51 70.6
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 3.4e-13 77.4 52 69.2
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 5.9e-13 76.6 52 73.1
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.7e-12 75.1 51 72.5
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.7e-12 75.1 51 72.5
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 1.7e-12 75.1 51 72.5
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 6.5e-12 73.2 48 68.8
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 6.5e-12 73.2 52 65.4
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 2.5e-11 71.2 52 65.4
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 2.5e-11 71.2 52 65.4
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 2.5e-11 71.2 52 67.3
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 2.5e-11 71.2 52 71.2
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 5.5e-11 70.1 52 67.3
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 9.4e-11 69.3 52 61.5
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 1.6e-10 68.6 42 71.4
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 2.1e-10 68.2 52 65.4
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 2.7e-10 67.8 52 63.5
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 4.7e-10 67.0 52 59.6
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 6.1e-10 66.6 52 61.5
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 7.9e-10 66.2 42 71.4
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 7.9e-10 66.2 52 59.6
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 1.4e-09 65.5 52 65.4
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 1.8e-09 65.1 52 61.5
Gohir.D07G144200 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.8e-09 65.1 42 69.0
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 3.9e-09 63.9 52 63.5
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 6.7e-09 63.2 52 59.6
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 8.8e-09 62.8 51 60.8
Gohir.A07G139100 Gossypium hirsutum HOM05D008687 ORTHO05D010822 5.7e-08 60.1 45 64.4
unitig_52.g17066 Utricularia gibba HOM05D008687 ORTHO05D010822 9.7e-08 59.3 53 56.6
HanXRQChr06g0166891 Helianthus annuus HOM05D008687 ORTHO05D010822 1.3e-07 58.9 47 53.2
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 2.2e-07 58.2 32 81.2
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 3.1e-06 54.3 32 75.0
SalBow3G0692 Salvia bowleyana HOM05D008687 ORTHO05D010822 5.3e-06 53.5 32 68.8
FAN10G1050 Fragaria x ananassa HOM05D036424 ORTHO05D010822 7.0e-06 53.1 31 74.2
FAN10G4301 Fragaria x ananassa HOM05D036424 ORTHO05D010822 7.0e-06 53.1 31 74.2
Hund16698 Selenicereus undatus HOM05D008687 ORTHO05D379573 9.1e-06 52.8 32 68.8


User provided reference genes

Program Settings