Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G062100 Carya illinoinensis HOM05D007251 ORTHO05D009266 3.8e-84 315.1 192 100.0
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 1.8e-65 253.1 167 78.4
QL12p025168 Quercus lobata HOM05D007251 ORTHO05D009266 1.1e-51 207.2 168 66.1
Prupe.1G459800 Prunus persica HOM05D007251 ORTHO05D009266 3.3e-48 195.7 169 59.2
Duzib168G1420 Durio zibethinus HOM05D007251 ORTHO05D009266 1.3e-47 193.7 168 61.9
Manes.16G135400 Manihot esculenta HOM05D007251 ORTHO05D009266 3.7e-47 192.2 169 60.4
TAR626G1006 Trochodendron aralioides HOM05D007251 ORTHO05D009266 4.8e-47 191.8 170 57.1
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 3.1e-46 189.1 169 58.6
COL.COLO4_19030 Corchorus olitorius HOM05D007251 ORTHO05D009266 7.0e-46 188.0 170 58.8
Dinv18148 Davidia involucrata HOM05D007251 ORTHO05D009266 7.0e-46 188.0 170 58.8
Gohir.A05G064200 Gossypium hirsutum HOM05D007251 ORTHO05D009266 7.0e-46 188.0 168 60.1
Peaxi162Scf00288g00912 Petunia axillaris HOM05D007251 ORTHO05D009266 4.5e-45 185.3 170 65.9
CSS0035408 Camellia sinensis var. sinensis HOM05D007251 ORTHO05D009266 5.9e-45 184.9 168 57.7
CAN.G908.8 Capsicum annuum HOM05D007251 ORTHO05D009266 1.3e-44 183.7 170 55.9
RcHm_v2.0_Chr6g0305021 Rosa chinensis HOM05D007251 ORTHO05D009266 3.8e-44 182.2 169 62.7
Nitab4.5_0002023g0010 Nicotiana tabacum HOM05D007251 ORTHO05D009266 8.5e-44 181.0 170 55.9
CsaV3_3G047120 Cucumis sativus L. HOM05D007251 ORTHO05D009266 1.1e-43 180.6 169 56.2
Sed0014514 Sechium edule HOM05D007251 ORTHO05D009266 1.1e-43 180.6 169 56.2
MELO3C003624.2 Cucumis melo HOM05D007251 ORTHO05D009266 1.4e-43 180.3 169 55.6
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.9e-43 179.9 169 65.1
Haze_21751 Corylus avellana HOM05D007251 ORTHO05D009266 2.5e-43 179.5 168 57.7
FvH4_2g36670 Fragaria vesca HOM05D007251 ORTHO05D009266 2.5e-43 179.5 169 57.4
Sopen08g022660 Solanum pennellii HOM05D007251 ORTHO05D009266 2.5e-43 179.5 170 54.7
Nitab4.5_0000502g0130 Nicotiana tabacum HOM05D007251 ORTHO05D009266 3.2e-43 179.1 169 54.4
Nn8g40494 Nelumbo nucifera HOM05D007251 ORTHO05D009266 5.5e-43 178.3 170 55.3
Eucgr.C02018 Eucalyptus grandis HOM05D007251 ORTHO05D009266 7.2e-43 177.9 168 73.8
TWI34G2010 Tripterygium wilfordii HOM05D007251 ORTHO05D009266 7.2e-43 177.9 169 55.6
Solyc08g069010.4 Solanum lycopersicum HOM05D007251 ORTHO05D009266 1.2e-42 177.2 170 53.5
GSVIVG01035517001 Vitis vinifera HOM05D007251 ORTHO05D009266 2.7e-42 176.0 169 54.4
Potri.006G273400 Populus trichocarpa HOM05D007251 ORTHO05D009266 6.7e-41 171.4 169 62.7
FAN27G2253 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.1e-40 170.6 181 60.2
FAN15G3149 Fragaria x ananassa HOM05D007251 ORTHO05D009266 3.3e-40 169.1 181 59.7
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 3.7e-39 165.6 169 53.8
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 3.7e-39 165.6 169 53.8
A02p00600 Brassica napus HOM05D007251 ORTHO05D009266 4.8e-39 165.2 168 51.2
BcaB05g21499 Brassica carinata HOM05D007251 ORTHO05D009266 8.2e-39 164.5 168 51.2
BolC2t06419H Brassica oleracea HOM05D007251 ORTHO05D009266 1.4e-38 163.7 168 51.2
MBI16_g41809_MAGBIO Magnolia biondii HOM05D007251 ORTHO05D009266 3.1e-38 162.5 171 55.0
Sabra06G0211800 Salix brachista HOM05D007251 ORTHO05D009266 4.1e-38 162.2 179 50.8
BraA02t05043Z Brassica rapa HOM05D007251 ORTHO05D009266 5.3e-38 161.8 168 50.6
ClCG05G017600 Citrullus lanatus HOM05D007251 ORTHO05D009266 5.3e-38 161.8 169 51.5
BcaC03g13325 Brassica carinata HOM05D007251 ORTHO05D009266 7.0e-38 161.4 168 50.6
C02p04590 Brassica napus HOM05D007251 ORTHO05D009266 7.0e-38 161.4 168 50.6
Cfa013277 Carpinus fangiana HOM05D007251 ORTHO05D009266 7.0e-38 161.4 168 52.4
Sp6g32780 Schrenkiella parvula HOM05D007251 ORTHO05D009266 7.0e-38 161.4 168 52.4
Glyma.14G134800 Glycine max HOM05D007251 ORTHO05D009266 1.2e-37 160.6 169 53.3
AL6G21210 Arabidopsis lyrata HOM05D007251 ORTHO05D009266 7.7e-37 157.9 168 51.8
SalBow8G3910 Salvia bowleyana HOM05D007251 ORTHO05D009266 1.0e-36 157.5 168 49.4
Cpa.g.sc23.18 Carica papaya HOM05D007251 ORTHO05D009266 1.3e-36 157.1 190 63.2
Aqoxy7G03087 Aquilegia oxysepala HOM05D007251 ORTHO05D009266 5.0e-36 155.2 167 52.1
Migut.E01424 Erythranthe guttata HOM05D007251 ORTHO05D009266 5.0e-36 155.2 168 48.8
SalBow8G5364 Salvia bowleyana HOM05D007251 ORTHO05D009266 1.1e-35 154.1 168 49.4
Ah.11g043880 Amaranthus hybridus HOM05D007251 ORTHO05D009266 3.2e-35 152.5 169 47.9
SGA_v2.0_scaffold121G33030 Striga asiatica HOM05D007251 ORTHO05D009266 7.2e-35 151.4 167 46.7
AUR62020596 Chenopodium quinoa HOM05D007251 ORTHO05D009266 1.6e-34 150.2 168 47.6
ATR0580G362 Amborella trichopoda HOM05D007251 ORTHO05D009266 3.6e-34 149.1 170 48.2
AUR62009072 Chenopodium quinoa HOM05D007251 ORTHO05D009266 3.6e-34 149.1 163 49.1
Lj7C750G16 Lonicera japonica HOM05D007251 ORTHO05D009266 1.5e-32 143.7 168 48.2
Gorai.009G067600 Gossypium raimondii HOM05D007251 ORTHO05D009266 1.7e-31 140.2 168 48.2
Thecc.09G007500 Theobroma cacao HOM05D007251 ORTHO05D009266 6.3e-31 138.3 168 47.0
Gohir.D05G066800 Gossypium hirsutum HOM05D007251 ORTHO05D009266 8.2e-31 137.9 168 47.6
Lalb_Chr24g0402511 Lupinus albus HOM05D007251 ORTHO05D009266 1.6e-29 133.7 168 47.0
Ciclev10010499m.g Citrus clementina HOM05D007251 ORTHO05D009266 2.7e-29 132.9 167 45.5
EL10Ac2g03759 Beta vulgaris HOM05D007251 ORTHO05D009266 1.5e-27 127.1 169 42.6
Zm00001eb099850 Zea mays HOM05D007251 ORTHO05D009266 1.5e-27 127.1 170 46.5
Atru.BG.4.p Acer truncatum HOM05D007251 ORTHO05D009266 2.5e-27 126.3 174 46.0
CANSAT56G3637 Cannabis sativa HOM05D007251 ORTHO05D009266 2.5e-27 126.3 169 40.8
AT5G10690 Arabidopsis thaliana HOM05D007251 ORTHO05D009266 1.4e-25 120.6 168 42.3
Phvul.001G059500 Phaseolus vulgaris HOM05D007251 ORTHO05D009266 2.3e-25 119.8 169 42.0
CDE05G1868 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 4.0e-25 119.0 169 44.4
Glyma.17G197900 Glycine max HOM05D007251 ORTHO05D009266 5.2e-25 118.6 169 43.8
Psat6g032880 Pisum sativum HOM05D007251 ORTHO05D009266 5.2e-25 118.6 169 42.0
arahy.Tifrunner.gnm1.ann1.5WJ9LU Arachis hypogaea HOM05D007251 ORTHO05D009266 4.4e-24 115.5 169 40.8
Ca_12854_v3 Cicer arietinum L. HOM05D007251 ORTHO05D009266 4.4e-24 115.5 169 41.4
TPR.G12085 Trifolium pratense HOM05D007251 ORTHO05D009266 7.5e-24 114.8 169 41.4
arahy.Tifrunner.gnm1.ann1.ULFK5V Arachis hypogaea HOM05D007251 ORTHO05D009266 1.3e-23 114.0 169 40.2
VMungo0647G2138 Vigna mungo HOM05D007251 ORTHO05D009266 1.7e-23 113.6 169 39.1
DCAR_003023 Daucus carota HOM05D007251 ORTHO05D009266 2.8e-23 112.8 176 38.6
Os09g0431600 Oryza sativa ssp. japonica HOM05D007251 ORTHO05D009266 4.1e-22 109.0 170 41.8
CARHR202630 Cardamine hirsuta HOM05D007251 ORTHO05D009266 7.0e-22 108.2 168 39.9
Oeu019776.1 Olea europaea HOM05D007251 ORTHO05D009266 1.6e-21 107.1 123 47.2
Thhalv10013072m.g Eutrema salsugineum HOM05D007251 ORTHO05D009266 2.7e-21 106.3 168 39.3
Medtr1g009650 Medicago truncatula HOM05D007251 ORTHO05D009266 1.7e-20 103.6 169 39.1
Aa31LG3G16450 Aethionema arabicum HOM05D007251 ORTHO05D009266 2.3e-20 103.2 168 39.3
Carub.0006s0915 Capsella rubella HOM05D007251 ORTHO05D009266 7.2e-19 98.2 125 43.2
SMO137G0044 Selaginella moellendorffii HOM05D007251 ORTHO05D009266 2.8e-18 96.3 163 36.8
Hund03293 Selenicereus undatus HOM05D007251 ORTHO05D009266 6.1e-18 95.1 166 35.5
CBR_g20311 Chara braunii HOM05D007251 ORTHO05D009266 6.3e-15 85.1 163 33.7
Mapoly0043s0002 Marchantia polymorpha HOM05D007251 ORTHO05D009266 1.4e-14 84.0 155 51.6
Pp3c8_4280 Physcomitrium patens HOM05D007251 ORTHO05D009266 9.2e-14 81.3 161 33.5
Actinidia06425 Actinidia chinensis HOM05D007251 ORTHO05D009266 7.8e-13 78.2 52 69.2
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 7.8e-13 78.2 162 45.1
CDE05G2179 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 5.6e-11 72.0 53 64.2


User provided reference genes

Program Settings