Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.1e-65 252.7 177 100.0
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 9.2e-61 237.3 177 96.0
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.9e-58 229.6 177 92.1
CiPaw.01G105900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.2e-57 226.9 177 85.9
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.4e-45 186.0 188 78.2
CiPaw.03G153800 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.1e-34 150.6 181 75.1
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.3e-32 141.7 179 68.2
CiPaw.09G066300 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-30 136.7 179 66.5
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.6e-28 130.2 98 68.4
CiPaw.11G026600 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.5e-26 123.6 93 68.8
CiPaw.01G280200 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.9e-26 123.2 91 72.5
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.3e-26 122.5 99 69.7
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-25 120.6 177 63.3
CiPaw.01G217800 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.7e-25 119.0 92 69.6
CiPaw.13G085700 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.8e-25 118.6 92 68.5
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.4e-24 117.1 89 66.3
CiPaw.04G185500 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.1e-24 115.9 87 69.0
CiPaw.05G086500 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.5e-20 102.4 78 66.7
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 7.9e-20 101.3 66 72.7
CiPaw.15G141100 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.9e-14 82.8 61 63.9
CiPaw.05G103700 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.5e-13 78.6 88 47.7
CiPaw.09G001000 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.1e-12 76.6 82 46.3
CiPaw.11G103900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.0e-11 74.3 86 45.3
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 3.1e-08 62.8 72 38.9
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 3.1e-08 62.8 45 53.3
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-08 62.0 65 49.2
TPR.G31023 Trifolium pratense HOM05D019053 ORTHO05D020883 1.5e-07 60.5 58 44.8
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 5.9e-07 58.5 67 46.3
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 7.7e-07 58.2 51 52.9
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 7.7e-07 58.2 55 52.7
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 7.7e-07 58.2 66 45.5
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 7.7e-07 58.2 74 39.2
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-06 57.8 55 52.7
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.4 74 47.3
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.4 85 44.7
Peaxi162Scf00064g02019 Petunia axillaris HOM05D001383 ORTHO05D000309 1.3e-06 57.4 67 44.8
Peaxi162Scf00273g01117 Petunia axillaris HOM05D001383 ORTHO05D000309 1.3e-06 57.4 67 46.3
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 1.3e-06 57.4 67 41.8
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 1.7e-06 57.0 67 44.8
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 2.9e-06 56.2 55 50.9
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 2.9e-06 56.2 67 43.3
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 2.9e-06 56.2 67 46.3
Carub.0004s0648 Capsella rubella HOM05D010286 ORTHO05D000309 3.8e-06 55.8 75 37.3
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-06 55.8 67 43.3
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-06 55.8 74 37.8
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-06 55.8 74 37.8
Peaxi162Scf00578g00524 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-06 55.8 71 43.7
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-06 55.8 74 37.8
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-06 55.8 67 43.3
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 3.8e-06 55.8 74 37.8
Cfa010107 Carpinus fangiana HOM05D011273 ORTHO05D013289 5.0e-06 55.5 78 34.6
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 5.0e-06 55.5 51 52.9
Cfa022968 Carpinus fangiana HOM05D011273 ORTHO05D013289 6.5e-06 55.1 59 39.0
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-06 55.1 66 45.5
VMungo0464G1367 Vigna mungo HOM05D008573 ORTHO05D009911 6.5e-06 55.1 71 38.0
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 8.5e-06 54.7 70 45.7
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 8.5e-06 54.7 55 50.9
Nitab4.5_0003726g0110 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.5e-06 54.7 57 47.4


User provided reference genes

Program Settings