Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G059900 Carya illinoinensis HOM05D003942 ORTHO05D004527 3.5e-236 821.2 419 100.0
Cfa003938 Carpinus fangiana HOM05D003942 ORTHO05D004527 1.5e-181 639.8 419 79.2
QL08p049021 Quercus lobata HOM05D003942 ORTHO05D004527 1.7e-177 626.3 424 78.8
CiPaw.02G030000 Carya illinoinensis HOM05D003942 ORTHO05D004527 1.5e-170 603.2 386 80.3
CSS0049620 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 1.3e-166 590.1 419 73.7
CSS0041241 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 1.7e-166 589.7 419 73.7
Dinv32469 Davidia involucrata HOM05D003942 ORTHO05D004527 2.8e-164 582.4 419 73.5
Haze_15488 Corylus avellana HOM05D003942 ORTHO05D004527 6.4e-161 571.2 419 72.8
Gorai.007G098800 Gossypium raimondii HOM05D003942 ORTHO05D004527 1.9e-160 569.7 411 72.5
Gohir.A11G088200 Gossypium hirsutum HOM05D003942 ORTHO05D004527 4.1e-160 568.5 411 72.5
Thecc.01G360500 Theobroma cacao HOM05D003942 ORTHO05D004527 4.1e-160 568.5 413 71.4
FAN10G4090 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.6e-159 565.1 420 70.2
Potri.014G082900 Populus trichocarpa HOM05D003942 ORTHO05D004527 4.6e-159 565.1 417 71.7
TWI23G1005 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 7.8e-159 564.3 405 71.1
CANSAT56G2580 Cannabis sativa HOM05D003942 ORTHO05D004527 1.3e-158 563.5 405 72.3
FAN01G0250 Fragaria x ananassa HOM05D003942 ORTHO05D004527 1.3e-158 563.5 422 70.6
COL.COLO4_12700 Corchorus olitorius HOM05D003942 ORTHO05D004527 2.3e-158 562.8 412 71.6
Duzib133G0298 Durio zibethinus HOM05D003942 ORTHO05D004527 3.0e-158 562.4 408 71.6
RcHm_v2.0_Chr1g0355071 Rosa chinensis HOM05D003942 ORTHO05D004527 1.5e-157 560.1 423 70.0
Prupe.2G168100 Prunus persica HOM05D003942 ORTHO05D004527 2.5e-157 559.3 424 69.8
TAR629G1832 Trochodendron aralioides HOM05D003942 ORTHO05D004527 7.3e-157 557.8 419 70.4
Rhsim07G0016400 Rhododendron simsii HOM05D003942 ORTHO05D004527 9.5e-157 557.4 411 70.3
FAN03G2475 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.8e-156 555.8 422 69.2
TAR375G0209 Trochodendron aralioides HOM05D003942 ORTHO05D004527 2.8e-156 555.8 419 69.7
FvH4_7g14170 Fragaria vesca HOM05D003942 ORTHO05D004527 3.6e-156 555.4 423 69.0
Manes.05G036000 Manihot esculenta HOM05D003942 ORTHO05D004527 3.6e-156 555.4 412 71.1
Cpa.g.sc18.243 Carica papaya HOM05D003942 ORTHO05D004527 4.7e-156 555.1 411 71.0
Sabra14G0060100 Salix brachista HOM05D003942 ORTHO05D004527 1.4e-155 553.5 418 70.1
FAN06G2309 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.3e-155 552.7 423 68.6
FAN06G3470 Fragaria x ananassa HOM05D003942 ORTHO05D004527 6.8e-155 551.2 423 68.8
Actinidia10022 Actinidia chinensis HOM05D003942 ORTHO05D004527 1.5e-154 550.1 411 69.3
MD01G1057600 Malus domestica HOM05D003942 ORTHO05D004527 3.4e-154 548.9 418 69.9
Atru.chr5.464 Acer truncatum HOM05D003942 ORTHO05D004527 1.7e-153 546.6 419 69.0
MD07G1139000 Malus domestica HOM05D003942 ORTHO05D004527 2.2e-153 546.2 407 71.0
THA.LOC104817290 Tarenaya hassleriana HOM05D003942 ORTHO05D004527 8.3e-153 544.3 409 68.7
Ciclev10020374m.g Citrus clementina HOM05D003942 ORTHO05D004527 1.1e-152 543.9 411 70.1
TWI59G0555 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 1.1e-152 543.9 405 68.6
Lalb_Chr03g0038211 Lupinus albus HOM05D003942 ORTHO05D004527 1.6e-151 540.0 407 68.6
PGR042G2566 Punica granatum HOM05D003942 ORTHO05D004527 6.0e-151 538.1 407 69.5
MBI18_g25515_MAGBIO Magnolia biondii HOM05D003942 ORTHO05D004527 6.6e-150 534.6 408 69.4
Psat4g154400 Pisum sativum HOM05D003942 ORTHO05D004527 1.9e-149 533.1 421 66.3
Nitab4.5_0001702g0090 Nicotiana tabacum HOM05D003942 ORTHO05D004527 2.5e-149 532.7 412 68.4
Nitab4.5_0008050g0040 Nicotiana tabacum HOM05D003942 ORTHO05D004527 3.3e-149 532.3 408 69.9
Glyma.07G071900 Glycine max HOM05D003942 ORTHO05D004527 4.3e-149 531.9 418 67.5
GSVIVG01026895001 Vitis vinifera HOM05D003942 ORTHO05D004527 5.6e-149 531.6 333 79.3
CAN.G399.13 Capsicum annuum HOM05D003942 ORTHO05D004527 7.3e-149 531.2 421 66.5
Cc02_g37870 Coffea canephora HOM05D003942 ORTHO05D004527 9.5e-149 530.8 417 66.2
Glyma.03G010800 Glycine max HOM05D003942 ORTHO05D004527 1.1e-147 527.3 421 66.5
Peaxi162Scf00191g01422 Petunia axillaris HOM05D003942 ORTHO05D004527 6.8e-147 524.6 410 67.1
Eucgr.E00157 Eucalyptus grandis HOM05D003942 ORTHO05D004527 8.9e-147 524.2 402 67.4
Lalb_Chr04g0256871 Lupinus albus HOM05D003942 ORTHO05D004527 1.5e-146 523.5 365 72.6
BcaC07g40631 Brassica carinata HOM05D003942 ORTHO05D004527 4.4e-146 521.9 388 67.8
C04p31390 Brassica napus HOM05D003942 ORTHO05D004527 7.6e-146 521.2 372 69.6
A04p01160 Brassica napus HOM05D003942 ORTHO05D004527 1.3e-145 520.4 380 68.2
BraA04t15833Z Brassica rapa HOM05D003942 ORTHO05D004527 1.3e-145 520.4 380 68.2
Ca_23643_v3 Cicer arietinum L. HOM05D003942 ORTHO05D004527 1.7e-145 520.0 425 64.0
Hund27285 Selenicereus undatus HOM05D003942 ORTHO05D004527 2.2e-145 519.6 413 65.4
PGSC0003DMG400021644 Solanum tuberosum HOM05D003942 ORTHO05D004527 2.9e-145 519.2 382 68.8
Thhalv10006010m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 8.4e-145 517.7 409 64.8
Solyc05g049900.3 Solanum lycopersicum HOM05D003942 ORTHO05D004527 8.4e-145 517.7 421 66.0
MSTRG.4859 Avicennia marina HOM05D003942 ORTHO05D004527 1.9e-144 516.5 423 64.1
BolC4t24688H Brassica oleracea HOM05D003942 ORTHO05D004527 1.9e-144 516.5 372 69.1
Sopen05g028240 Solanum pennellii HOM05D003942 ORTHO05D004527 1.9e-144 516.5 421 65.6
Aqoxy5G04009 Aquilegia oxysepala HOM05D003942 ORTHO05D004527 2.4e-144 516.2 396 67.7
VMungo0331G0006 Vigna mungo HOM05D003942 ORTHO05D004527 2.4e-144 516.2 404 66.8
arahy.Tifrunner.gnm1.ann1.2H0UDK Arachis hypogaea HOM05D003942 ORTHO05D004527 7.1e-144 514.6 427 64.6
HanXRQChr16g0522811 Helianthus annuus HOM05D003942 ORTHO05D004527 3.5e-143 512.3 401 65.8
Aa31LG10G15570 Aethionema arabicum HOM05D003942 ORTHO05D004527 4.6e-143 511.9 403 66.0
arahy.Tifrunner.gnm1.ann1.Q5YAPI Arachis hypogaea HOM05D003942 ORTHO05D004527 4.6e-143 511.9 427 64.4
A09p53400 Brassica napus HOM05D003942 ORTHO05D004527 6.0e-143 511.5 407 64.6
Phvul.010G097300 Phaseolus vulgaris HOM05D003942 ORTHO05D004527 1.0e-142 510.8 404 66.8
CDE09G0298 Ceratophyllum demersum HOM05D003942 ORTHO05D004527 1.7e-142 510.0 389 66.1
AL5G43590 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 2.3e-142 509.6 412 64.1
AUR62004344 Chenopodium quinoa HOM05D003942 ORTHO05D004527 3.0e-142 509.2 370 67.0
SalBow5G2271 Salvia bowleyana HOM05D003942 ORTHO05D004527 3.0e-142 509.2 383 67.6
BraA09t40766Z Brassica rapa HOM05D003942 ORTHO05D004527 3.9e-142 508.8 423 62.9
Lj9A582T85 Lonicera japonica HOM05D003942 ORTHO05D004527 5.1e-142 508.4 475 57.9
Carub.0005s2799 Capsella rubella HOM05D003942 ORTHO05D004527 6.6e-142 508.1 408 64.5
Lj3g0006137 Lotus japonicus HOM05D003942 ORTHO05D004527 1.9e-141 506.5 422 63.7
Sp5g02060 Schrenkiella parvula HOM05D003942 ORTHO05D004527 2.5e-141 506.1 401 64.6
C08p36210 Brassica napus HOM05D003942 ORTHO05D004527 3.3e-141 505.8 401 64.6
BolC8t51203H Brassica oleracea HOM05D003942 ORTHO05D004527 3.3e-141 505.8 408 64.5
DCAR_015969 Daucus carota HOM05D003942 ORTHO05D004527 7.3e-141 504.6 420 63.8
Carub.0004s2857 Capsella rubella HOM05D003942 ORTHO05D004527 9.6e-141 504.2 406 65.3
AUR62022550 Chenopodium quinoa HOM05D003942 ORTHO05D004527 4.7e-140 501.9 366 67.2
Thhalv10001467m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 6.2e-140 501.5 406 63.8
Oeu020562.1 Olea europaea HOM05D003942 ORTHO05D004527 1.1e-139 500.7 332 75.3
SGA_v2.0_scaffold43G16422 Striga asiatica HOM05D003942 ORTHO05D004527 1.4e-139 500.4 405 64.0
Aa31LG1G27300 Aethionema arabicum HOM05D003942 ORTHO05D004527 1.8e-139 500.0 409 64.1
CARHR141140 Cardamine hirsuta HOM05D003942 ORTHO05D004527 2.4e-139 499.6 406 65.0
AL4G45080 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 4.0e-139 498.8 409 64.8
Migut.N01440 Erythranthe guttata HOM05D003942 ORTHO05D004527 4.0e-139 498.8 407 62.9
Lsat_1_v5_gn_4_36221 Lactuca sativa HOM05D003942 ORTHO05D004527 4.0e-139 498.8 401 64.6
Lsat_1_v5_gn_3_137060 Lactuca sativa HOM05D003942 ORTHO05D004527 3.4e-138 495.7 418 64.8
HanXRQChr13g0426521 Helianthus annuus HOM05D003942 ORTHO05D004527 9.9e-138 494.2 412 64.8
Medtr8g031000 Medicago truncatula HOM05D003942 ORTHO05D004527 9.9e-138 494.2 335 73.1
Sp4g27940 Schrenkiella parvula HOM05D003942 ORTHO05D004527 9.9e-138 494.2 406 63.3
Ah.05g180690 Amaranthus hybridus HOM05D003942 ORTHO05D004527 1.3e-137 493.8 411 61.1
BcaC09g52244 Brassica carinata HOM05D003942 ORTHO05D004527 2.9e-137 492.7 376 66.0
BolC4t28689H Brassica oleracea HOM05D003942 ORTHO05D004527 2.9e-137 492.7 409 64.5
BcaC02g10219 Brassica carinata HOM05D003942 ORTHO05D004527 3.8e-137 492.3 372 67.7
TPR.G15979 Trifolium pratense HOM05D003942 ORTHO05D004527 3.8e-137 492.3 334 74.0
C04p71910 Brassica napus HOM05D003942 ORTHO05D004527 8.4e-137 491.1 409 64.5
BcaC02g07065 Brassica carinata HOM05D003942 ORTHO05D004527 7.1e-136 488.0 408 63.5
BraA04t18872Z Brassica rapa HOM05D003942 ORTHO05D004527 9.3e-136 487.6 409 64.3
A04p34110 Brassica napus HOM05D003942 ORTHO05D004527 3.9e-134 482.3 409 64.1
ECA240G2096 Erigeron canadensis HOM05D003942 ORTHO05D004527 4.9e-129 465.3 333 70.9
Sc23g0002980 Simmondsia chinensis HOM05D003942 ORTHO05D004527 2.5e-125 453.0 341 70.1
unitig_8.g3394 Utricularia gibba HOM05D003942 ORTHO05D004527 1.4e-123 447.2 410 59.5
AT2G45870 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 1.8e-123 446.8 348 67.2
EL10Ac1g00428 Beta vulgaris HOM05D003942 ORTHO05D004527 3.4e-122 442.6 305 70.2
Os03g0106000 Oryza sativa ssp. japonica HOM05D003942 ORTHO05D004527 1.1e-120 437.6 367 61.0
HPP92_006558 Vanilla planifolia HOM05D003942 ORTHO05D004527 4.6e-119 432.2 358 61.5
Zm00001eb000510 Zea mays HOM05D003942 ORTHO05D004527 1.4e-115 420.6 388 56.7
ECA234G1137 Erigeron canadensis HOM05D003942 ORTHO05D004527 1.3e-110 404.1 293 70.3
SEGI_25793 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 8.7e-110 401.4 340 58.8
Duzib138G1448 Durio zibethinus HOM05D003942 ORTHO05D004527 1.1e-109 401.0 412 56.8
SEGI_35716 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 2.5e-109 399.8 370 57.6
Pp3c4_15850 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.5e-104 383.3 344 55.5
Pp3c3_22870 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.3e-102 377.5 341 55.7
Nn1g01512 Nelumbo nucifera HOM05D003942 ORTHO05D004527 1.8e-102 377.1 419 52.5
Mapoly0071s0037 Marchantia polymorpha HOM05D003942 ORTHO05D004527 1.5e-98 364.0 327 54.7
vmacro13277 Vaccinium macrocarpon HOM05D003942 ORTHO05D004527 9.4e-96 354.8 433 49.0
Gohir.D11G092500 Gossypium hirsutum HOM05D003942 ORTHO05D004527 4.7e-95 352.4 282 67.7
SMO364G0338 Selaginella moellendorffii HOM05D003942 ORTHO05D004527 7.9e-95 351.7 314 55.7
AT3G61320 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 4.8e-84 315.8 285 58.2
Mapoly0009s0131 Marchantia polymorpha HOM05D003942 ORTHO05D004527 4.1e-75 286.2 307 44.6
AagrBONN_evm.TU.Sc2ySwM_344.3805 Anthoceros agrestis HOM05D003942 ORTHO05D004527 5.9e-74 282.3 331 44.1
AagrBONN_evm.TU.Sc2ySwM_228.958 Anthoceros agrestis HOM05D003942 ORTHO05D004527 8.5e-73 278.5 314 46.2
ATR0680G085 Amborella trichopoda HOM05D003942 ORTHO05D004527 7.2e-72 275.4 335 48.7
FAN10G2852 Fragaria x ananassa HOM05D003942 ORTHO05D004527 9.4e-72 275.0 238 64.7
Pp3c2_13700 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.4e-67 259.2 311 44.1
AagrBONN_evm.TU.Sc2ySwM_362.1957 Anthoceros agrestis HOM05D003942 ORTHO05D004527 1.2e-66 258.1 293 45.4
Pp3c1_3670 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.0e-65 252.7 288 45.1
Pp3c11_9440 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.5e-64 250.4 299 41.1
Pp3c1_34600 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.5e-64 250.4 291 43.6
Pp3c1_34560 Physcomitrium patens HOM05D003942 ORTHO05D004527 4.2e-64 249.6 284 45.8
HPP92_011356 Vanilla planifolia HOM05D003942 ORTHO05D004527 9.5e-64 248.4 181 65.2
MD01G1202300 Malus domestica HOM05D003942 ORTHO05D004527 1.0e-62 245.0 252 55.2
CBR_g44610 Chara braunii HOM05D000505 ORTHO05D000301 3.0e-62 243.4 357 37.5
CARHR171630 Cardamine hirsuta HOM05D003942 ORTHO05D004527 5.7e-61 239.2 224 58.9
Pp3c6_24250 Physcomitrium patens HOM05D003942 ORTHO05D004527 4.1e-59 233.0 289 42.2
Oeu020563.1 Olea europaea HOM05D003942 ORTHO05D004527 5.0e-57 226.1 155 76.1
Pp3c14_6660 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.0e-57 226.1 268 41.8
C05p09980 Brassica napus HOM05D003942 ORTHO05D004527 3.0e-54 216.9 199 62.3
CBR_g772 Chara braunii HOM05D003942 ORTHO05D004527 1.7e-49 201.1 322 37.0
AagrBONN_evm.TU.Sc2ySwM_228.2628 Anthoceros agrestis HOM05D003942 ORTHO05D004527 7.5e-45 185.7 153 53.6
SEGI_34263 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 1.7e-44 184.5 196 53.6
Cre06.g277650 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 2.4e-43 180.6 328 32.9
FAN10G0144 Fragaria x ananassa HOM05D003942 ORTHO05D004527 4.6e-42 176.4 125 76.0
HPP92_011355 Vanilla planifolia HOM05D003942 ORTHO05D004527 1.3e-41 174.9 143 61.5
Cre16.g662600 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 3.9e-41 173.3 351 32.8
Cre16.g663450 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.5e-40 171.4 313 33.9
Cre11.g474700 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 5.6e-40 169.5 323 31.9
Cre16.g663400 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 1.6e-39 167.9 315 33.7
Cre06.g261750 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 2.1e-39 167.5 310 30.6
CBR_g38187 Chara braunii HOM05D003942 ORTHO05D004527 1.1e-38 165.2 220 42.3
Cre01.g038100 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 2.7e-34 150.6 351 27.6
Cre07.g355300 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 4.6e-34 149.8 312 30.8
PRCOL_00004040 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 1.1e-30 138.7 293 32.4
BcaB02g11262 Brassica carinata HOM05D003942 ORTHO05D004527 1.7e-28 131.3 113 57.5
FAN10G3156 Fragaria x ananassa HOM05D000449 ORTHO05D004527 2.7e-26 124.0 81 79.0
Oeu020564.1 Olea europaea HOM05D003942 ORTHO05D004527 4.6e-26 123.2 77 80.5
MCO01G232 Micromonas commoda HOM05D003942 ORTHO05D004527 6.0e-26 122.9 335 28.1
PRCOL_00006054 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 7.8e-26 122.5 315 27.9
Pp3c11_6680 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.3e-25 121.7 128 43.0
Pp3c6_17920 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.5e-24 118.2 187 37.4
SEGI_01331 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 4.3e-24 116.7 80 70.0
Cre03.g199600 Chlamydomonas reinhardtii HOM05D003942 ORTHO05D004527 5.6e-24 116.3 219 31.1
PRCOL_00003097 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 1.2e-23 115.2 294 28.2
PRCOL_00003548 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 8.1e-23 112.5 315 30.2
PRCOL_00005764 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 1.2e-21 108.6 322 29.2
MCO09G357 Micromonas commoda HOM05D003942 ORTHO05D004527 7.8e-18 95.9 361 23.5
PRCOL_00004398 Prasinoderma coloniale HOM05D003942 ORTHO05D004527 5.1e-17 93.2 304 26.0
MCO01G007 Micromonas commoda HOM05D003942 ORTHO05D004527 1.9e-16 91.3 333 25.8
Pp3c3_14710 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.1e-10 71.2 139 34.5
PSO478G4509 Papaver somniferum HOM05D003942 ORTHO05D004527 3.9e-09 67.0 62 58.1
Pp3c20_3390 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.6e-07 61.6 89 42.7


User provided reference genes

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