Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.0e-57 226.5 113 100.0
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 4.7e-50 201.1 109 90.8
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 4.4e-48 194.5 109 87.2
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 9.7e-48 193.4 109 86.2
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 1.2e-45 186.4 109 80.7
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 1.2e-45 186.4 109 82.6
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.6e-45 186.0 109 80.7
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 2.0e-45 185.7 109 82.6
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.0e-45 185.7 109 79.8
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 2.7e-45 185.3 109 80.7
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 4.5e-45 184.5 109 82.6
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 4.5e-45 184.5 109 78.9
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 4.5e-45 184.5 109 79.8
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 4.5e-45 184.5 109 81.7
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 7.7e-45 183.7 109 79.8
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.0e-44 183.3 109 80.7
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 1.0e-44 183.3 109 81.7
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 1.3e-44 183.0 109 81.7
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 2.2e-44 182.2 108 80.6
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 2.9e-44 181.8 109 79.8
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 3.8e-44 181.4 109 81.7
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 3.8e-44 181.4 109 81.7
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 3.8e-44 181.4 109 79.8
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 5.0e-44 181.0 110 81.8
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 6.5e-44 180.6 109 78.9
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 8.5e-44 180.3 109 79.8
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 1.1e-43 179.9 109 79.8
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.1e-43 179.9 109 78.0
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 1.1e-43 179.9 109 79.8
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 1.1e-43 179.9 109 78.9
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 1.1e-43 179.9 109 80.7
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.1e-43 179.9 109 80.7
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 1.5e-43 179.5 109 80.7
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 3.2e-43 178.3 109 78.9
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 3.2e-43 178.3 109 78.9
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 3.2e-43 178.3 109 78.9
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 4.2e-43 177.9 109 78.0
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 4.2e-43 177.9 108 78.7
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 4.2e-43 177.9 109 79.8
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 5.5e-43 177.6 109 78.0
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 5.5e-43 177.6 109 78.9
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 7.2e-43 177.2 109 78.0
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 7.2e-43 177.2 109 77.1
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 9.4e-43 176.8 109 75.2
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 9.4e-43 176.8 109 78.0
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 9.4e-43 176.8 109 80.7
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.2e-42 176.4 109 78.0
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 1.2e-42 176.4 109 78.0
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 1.2e-42 176.4 109 78.9
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.2e-42 176.4 109 77.1
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.2e-42 176.4 108 78.7
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 1.2e-42 176.4 108 78.7
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.6e-42 176.0 109 79.8
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 2.1e-42 175.6 109 78.0
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 2.1e-42 175.6 109 78.0
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 2.1e-42 175.6 109 76.1
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 2.7e-42 175.3 109 75.2
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 2.7e-42 175.3 109 75.2
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 2.7e-42 175.3 109 77.1
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 3.6e-42 174.9 109 74.3
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 3.6e-42 174.9 109 78.0
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.6e-42 174.9 108 77.8
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 3.6e-42 174.9 109 77.1
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 4.7e-42 174.5 111 74.8
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 6.1e-42 174.1 109 79.8
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 6.1e-42 174.1 109 79.8
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 8.0e-42 173.7 109 74.3
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.0e-41 173.3 108 77.8
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 1.0e-41 173.3 109 77.1
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.8e-41 172.6 111 74.8
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 4.0e-41 171.4 109 75.2
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 4.0e-41 171.4 109 78.0
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 5.2e-41 171.0 109 75.2
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 5.2e-41 171.0 111 73.9
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 8.8e-41 170.2 109 74.3
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 8.8e-41 170.2 109 74.3
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 8.8e-41 170.2 109 73.4
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 1.2e-40 169.9 109 75.2
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 1.5e-40 169.5 109 76.1
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 2.0e-40 169.1 108 75.0
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 3.4e-40 168.3 109 73.4
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 4.4e-40 167.9 109 73.4
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 4.4e-40 167.9 109 75.2
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 5.7e-40 167.5 109 73.4
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 7.5e-40 167.2 109 73.4
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 7.5e-40 167.2 109 74.3
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.3e-39 166.4 109 73.4
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.7e-39 166.0 109 73.4
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 1.7e-39 166.0 109 74.3
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 1.7e-39 166.0 109 71.6
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 2.2e-39 165.6 109 74.3
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 2.8e-39 165.2 109 72.5
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 2.8e-39 165.2 109 69.7
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 4.8e-39 164.5 109 72.5
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 4.8e-39 164.5 109 71.6
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 6.3e-39 164.1 109 72.5
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 6.3e-39 164.1 109 72.5
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 8.3e-39 163.7 109 70.6
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 1.4e-38 162.9 109 69.7
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 1.4e-38 162.9 108 71.3
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 2.4e-38 162.2 109 69.7
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.4e-38 162.2 109 72.5
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 3.1e-38 161.8 109 71.6
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 5.4e-38 161.0 109 71.6
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 5.4e-38 161.0 109 71.6
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.2e-37 159.8 98 78.6
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 2.7e-37 158.7 109 68.8
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 4.5e-37 157.9 109 70.6
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 5.9e-37 157.5 109 69.7
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 5.9e-37 157.5 109 67.0
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 7.7e-37 157.1 109 67.9
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 3.8e-36 154.8 109 67.9
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 1.6e-34 149.4 109 65.1
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 8.0e-34 147.1 109 65.1
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.8e-33 146.0 108 69.4
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 4.0e-33 144.8 108 68.5
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 5.2e-33 144.4 111 62.2
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 6.8e-33 144.1 109 62.4
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 3.7e-31 138.3 109 60.6
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 5.9e-29 131.0 108 56.5
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 3.8e-28 128.3 78 80.8
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 5.6e-27 124.4 71 85.9
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 1.6e-26 122.9 113 54.9
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 1.5e-24 116.3 108 50.9
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 9.8e-24 113.6 88 65.9
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 9.8e-24 113.6 109 51.4
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 9.8e-24 113.6 111 51.4
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 2.7e-21 105.5 77 63.6
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 4.6e-21 104.8 84 70.2
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 4.6e-21 104.8 109 43.1
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.0e-20 103.6 108 51.9
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 1.5e-19 99.8 110 38.2
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 7.3e-19 97.4 109 44.0
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 1.2e-16 90.1 116 42.2
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 4.6e-13 78.2 54 68.5
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 9.5e-11 70.5 40 82.5
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 1.1e-09 67.0 36 88.9
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 1.7e-07 59.7 32 78.1


User provided reference genes

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