Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 2.4e-43 178.3 85 100.0
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 9.6e-40 166.4 84 91.7
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 2.4e-38 161.8 84 90.5
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 3.5e-34 147.9 84 81.0
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 4.0e-30 134.4 84 72.6
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 6.9e-30 133.7 84 72.6
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 7.6e-29 130.2 85 70.6
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 9.9e-29 129.8 84 69.0
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 9.9e-29 129.8 86 74.4
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 1.3e-28 129.4 84 69.0
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 2.2e-28 128.6 84 70.2
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.9e-28 127.5 84 69.0
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 2.4e-27 125.2 87 71.3
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 4.2e-27 124.4 87 69.0
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 7.1e-27 123.6 84 65.5
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 7.1e-27 123.6 87 71.3
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 9.3e-27 123.2 86 70.9
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.3e-27 123.2 84 65.5
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.2e-26 122.9 84 66.7
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.6e-26 120.9 84 66.7
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 4.6e-26 120.9 84 66.7
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 6.0e-26 120.6 84 63.1
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 6.0e-26 120.6 84 63.1
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 6.0e-26 120.6 84 63.1
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 6.0e-26 120.6 84 67.9
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 7.9e-26 120.2 84 63.1
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.3e-25 119.4 84 64.3
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 1.8e-25 119.0 84 63.1
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 8.7e-25 116.7 87 64.4
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 4.3e-24 114.4 83 62.7
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 1.6e-23 112.5 84 60.7
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 2.1e-23 112.1 77 64.9
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 4.8e-23 110.9 87 60.9
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 8.2e-23 110.2 88 61.4
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 8.2e-23 110.2 87 63.2
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 1.1e-22 109.8 81 66.7
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.4e-22 109.4 87 60.9
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 1.8e-22 109.0 85 64.7
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.8e-22 109.0 88 61.4
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 3.1e-22 108.2 88 63.6
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 4.0e-22 107.8 87 57.5
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 5.3e-22 107.5 81 64.2
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 9.0e-22 106.7 68 72.1
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 1.5e-21 105.9 85 61.2
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 2.6e-21 105.1 86 62.8
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 2.6e-21 105.1 87 63.2
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 5.8e-21 104.0 81 64.2
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 7.6e-21 103.6 77 64.9
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 7.6e-21 103.6 86 60.5
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 1.0e-20 103.2 80 61.2
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.7e-20 102.4 81 63.0
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 1.7e-20 102.4 81 63.0
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.7e-20 102.4 80 62.5
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 2.2e-20 102.1 83 62.7
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 2.2e-20 102.1 86 59.3
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 2.2e-20 102.1 81 63.0
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 3.8e-20 101.3 88 61.4
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 4.9e-20 100.9 86 59.3
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 6.5e-20 100.5 80 58.8
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 6.5e-20 100.5 86 58.1
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 8.4e-20 100.1 78 64.1
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 8.4e-20 100.1 83 63.9
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 1.4e-19 99.4 78 61.5
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 1.9e-19 99.0 86 55.8
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 2.5e-19 98.6 87 58.6
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 4.2e-19 97.8 78 59.0
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 4.2e-19 97.8 78 59.0
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 4.2e-19 97.8 78 59.0
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 5.5e-19 97.4 80 58.8
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 7.1e-19 97.1 86 57.0
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.2e-18 96.3 77 62.3
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 2.7e-18 95.1 51 78.4
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 4.6e-18 94.4 70 67.1
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 4.6e-18 94.4 91 52.7
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 6.0e-18 94.0 85 54.1
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 6.0e-18 94.0 62 67.7
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 7.9e-18 93.6 53 81.1
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 1.3e-17 92.8 51 80.4
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 1.8e-17 92.4 60 66.7
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 1.8e-17 92.4 51 78.4
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 3.9e-17 91.3 89 52.8
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 8.7e-17 90.1 81 56.8
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.1e-16 89.7 49 83.7
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 1.1e-16 89.7 51 76.5
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 1.1e-16 89.7 71 66.2
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 1.5e-16 89.4 78 53.8
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 1.5e-16 89.4 78 53.8
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 1.9e-16 89.0 49 75.5
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 2.5e-16 88.6 51 74.5
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 5.7e-16 87.4 53 75.5
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 5.7e-16 87.4 87 56.3
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 2.2e-15 85.5 53 73.6
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.2e-15 85.5 46 80.4
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 8.2e-15 83.6 51 72.5
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 1.4e-14 82.8 52 71.2
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 2.4e-14 82.0 81 53.1
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 5.3e-14 80.9 46 71.7
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 7.7e-13 77.0 50 62.0
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 1.7e-12 75.9 50 62.0
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 2.2e-12 75.5 50 62.0
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 5.0e-12 74.3 78 47.4
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 8.5e-12 73.6 50 60.0
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.4e-11 72.8 53 60.4
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 4.2e-11 71.2 64 60.9
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 2.2e-07 58.9 60 60.0
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 2.2e-07 58.9 60 60.0


User provided reference genes

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