Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G050400 Carya illinoinensis HOM05D006090 ORTHO05D007600 7.5e-43 176.8 90 100.0
Prupe.8G199000 Prunus persica HOM05D006090 ORTHO05D007600 3.4e-35 151.4 87 83.9
FvH4_2g18550 Fragaria vesca HOM05D006090 ORTHO05D007600 1.3e-34 149.4 87 81.6
FAN15G1212 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.3e-34 149.4 87 81.6
RcHm_v2.0_Chr6g0284111 Rosa chinensis HOM05D006090 ORTHO05D007600 2.9e-34 148.3 87 80.5
MD05G1171700 Malus domestica HOM05D006090 ORTHO05D007600 3.7e-34 147.9 87 83.9
MD10G1159900 Malus domestica HOM05D006090 ORTHO05D007600 4.9e-34 147.5 86 84.9
Hma1.2p1_0052F.1_g030080 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 6.4e-34 147.1 90 80.0
Manes.06G087700 Manihot esculenta HOM05D006090 ORTHO05D007600 1.1e-33 146.4 90 80.0
GSVIVG01028416001 Vitis vinifera HOM05D006090 ORTHO05D007600 3.2e-33 144.8 87 82.8
BcaB04g17463 Brassica carinata HOM05D006090 ORTHO05D007600 4.1e-33 144.4 90 80.0
CSS0021939 Camellia sinensis var. sinensis HOM05D006090 ORTHO05D007600 4.1e-33 144.4 87 80.5
PGR044G2731 Punica granatum HOM05D006090 ORTHO05D007600 4.1e-33 144.4 90 80.0
Carub.0001s3724 Capsella rubella HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 78.9
Potri.002G245800 Populus trichocarpa HOM05D006090 ORTHO05D007600 5.4e-33 144.1 86 82.6
Rhsim01G0252800 Rhododendron simsii HOM05D006090 ORTHO05D007600 5.4e-33 144.1 90 77.8
Dinv19173 Davidia involucrata HOM05D006090 ORTHO05D007600 7.0e-33 143.7 90 77.8
Psat3g148760 Pisum sativum HOM05D006090 ORTHO05D007600 7.0e-33 143.7 86 81.4
vmacro14732 Vaccinium macrocarpon HOM05D006090 ORTHO05D007600 7.0e-33 143.7 87 79.3
BcaC07g37170 Brassica carinata HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 78.9
C08p05430 Brassica napus HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 78.9
BolC8t47360H Brassica oleracea HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 78.9
Thhalv10011899m.g Eutrema salsugineum HOM05D006090 ORTHO05D007600 9.2e-33 143.3 90 78.9
TPR.G6479 Trifolium pratense HOM05D006090 ORTHO05D007600 9.2e-33 143.3 86 80.2
CARHR037780 Cardamine hirsuta HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 77.8
Glyma.08G349000 Glycine max HOM05D006090 ORTHO05D007600 1.6e-32 142.5 86 81.4
HanXRQChr01g0015271 Helianthus annuus HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 76.7
Lsat_1_v5_gn_8_5041 Lactuca sativa HOM05D006090 ORTHO05D007600 1.6e-32 142.5 90 75.6
BraA08t32537Z Brassica rapa HOM05D006090 ORTHO05D007600 2.1e-32 142.1 90 78.9
Medtr7g056250 Medicago truncatula HOM05D006090 ORTHO05D007600 2.7e-32 141.7 86 79.1
Sp1g35110 Schrenkiella parvula HOM05D006090 ORTHO05D007600 2.7e-32 141.7 90 77.8
TWI18G0803 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 3.5e-32 141.4 87 78.2
AT1G48140 Arabidopsis thaliana HOM05D006090 ORTHO05D007600 4.6e-32 141.0 87 79.3
AL1G54720 Arabidopsis lyrata HOM05D006090 ORTHO05D007600 6.0e-32 140.6 87 78.2
ECA248G3406 Erigeron canadensis HOM05D006090 ORTHO05D007600 6.0e-32 140.6 90 73.3
Ca_06547_v3 Cicer arietinum L. HOM05D006090 ORTHO05D007600 7.8e-32 140.2 86 79.1
Lj5g0019908 Lotus japonicus HOM05D006090 ORTHO05D007600 7.8e-32 140.2 86 79.1
TAR362G1026 Trochodendron aralioides HOM05D006090 ORTHO05D007600 7.8e-32 140.2 90 76.7
Nn8g41078 Nelumbo nucifera HOM05D006090 ORTHO05D007600 1.0e-31 139.8 90 75.6
A08p05190 Brassica napus HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 77.8
CANSAT21G0941 Cannabis sativa HOM05D006090 ORTHO05D007600 1.3e-31 139.4 87 78.2
FAN24G0022 Fragaria x ananassa HOM05D006090 ORTHO05D007600 1.3e-31 139.4 100 70.0
PSO170G6116 Papaver somniferum HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 75.6
Sed0025432 Sechium edule HOM05D006090 ORTHO05D007600 1.3e-31 139.4 86 79.1
THA.LOC104802658 Tarenaya hassleriana HOM05D006090 ORTHO05D007600 1.3e-31 139.4 90 75.6
Gohir.D07G205600 Gossypium hirsutum HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 73.3
Lj1g0010865 Lotus japonicus HOM05D006090 ORTHO05D007600 2.3e-31 138.7 86 77.9
SalBow6G1264 Salvia bowleyana HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 73.3
SalBow6G7055 Salvia bowleyana HOM05D006090 ORTHO05D007600 2.3e-31 138.7 90 73.3
Gohir.A07G199200 Gossypium hirsutum HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 73.3
Gorai.001G231600 Gossypium raimondii HOM05D006090 ORTHO05D007600 3.0e-31 138.3 90 73.3
Lalb_Chr03g0041481 Lupinus albus HOM05D006090 ORTHO05D007600 3.0e-31 138.3 85 78.8
Thecc.02G015400 Theobroma cacao HOM05D006090 ORTHO05D007600 3.0e-31 138.3 86 77.9
ClCG10G009020 Citrullus lanatus HOM05D006090 ORTHO05D007600 3.9e-31 137.9 86 75.6
Haze_03967 Corylus avellana HOM05D006090 ORTHO05D007600 5.1e-31 137.5 97 74.2
Atru.chr6.1016 Acer truncatum HOM05D006090 ORTHO05D007600 8.6e-31 136.7 89 75.3
PSO445G0009 Papaver somniferum HOM05D006090 ORTHO05D007600 1.1e-30 136.3 90 73.3
QL09p032732 Quercus lobata HOM05D006090 ORTHO05D007600 1.1e-30 136.3 89 75.3
Hma1.2p1_0226F.1_g095400 Hydrangea macrophylla HOM05D006090 ORTHO05D007600 1.5e-30 136.0 90 74.4
Oeu051534.1 Olea europaea HOM05D006090 ORTHO05D007600 1.9e-30 135.6 90 72.2
Duzib211G0047 Durio zibethinus HOM05D006090 ORTHO05D007600 2.5e-30 135.2 87 74.7
Duzib211G0371 Durio zibethinus HOM05D006090 ORTHO05D007600 2.5e-30 135.2 87 74.7
Cc06_g17130 Coffea canephora HOM05D006090 ORTHO05D007600 3.3e-30 134.8 87 73.6
Migut.N03342 Erythranthe guttata HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 72.2
Solyc01g005110.3 Solanum lycopersicum HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 70.0
Sopen01g001130 Solanum pennellii HOM05D006090 ORTHO05D007600 3.3e-30 134.8 90 70.0
TWI36G1609 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 3.3e-30 134.8 86 74.4
Thecc.01G220300 Theobroma cacao HOM05D006090 ORTHO05D007600 4.3e-30 134.4 88 73.9
CAN.G282.104 Capsicum annuum HOM05D006090 ORTHO05D007600 7.3e-30 133.7 90 70.0
QL02p097583 Quercus lobata HOM05D006090 ORTHO05D007600 7.3e-30 133.7 89 74.2
CDE09G0476 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 90 71.1
Lsat_1_v5_gn_5_180801 Lactuca sativa HOM05D006090 ORTHO05D007600 9.5e-30 133.3 84 75.0
Phvul.002G080700 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 9.5e-30 133.3 86 74.4
PGR004G1711 Punica granatum HOM05D006090 ORTHO05D007600 9.5e-30 133.3 89 76.4
Sp3g06170 Schrenkiella parvula HOM05D006090 ORTHO05D007600 1.2e-29 132.9 87 71.3
MBI04_g03342_MAGBIO Magnolia biondii HOM05D006090 ORTHO05D007600 1.6e-29 132.5 90 70.0
CAN.G151.21 Capsicum annuum HOM05D006090 ORTHO05D007600 2.8e-29 131.7 90 68.9
Aa31LG10G5590 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.7e-29 131.0 97 69.1
Aa31LG5G17800 Aethionema arabicum HOM05D006090 ORTHO05D007600 4.7e-29 131.0 87 69.0
TWI75G0179 Tripterygium wilfordii HOM05D006090 ORTHO05D007600 4.7e-29 131.0 87 73.6
Sed0016973 Sechium edule HOM05D006090 ORTHO05D007600 6.2e-29 130.6 90 68.9
BNapus_Darmor_BZH_scaffold_109p00180 Brassica napus HOM05D006090 ORTHO05D007600 8.1e-29 130.2 87 70.1
Nitab4.5_0014260g0010 Nicotiana tabacum HOM05D006090 ORTHO05D007600 1.1e-28 129.8 90 66.7
EL10Ac7g17901 Beta vulgaris HOM05D006090 ORTHO05D007600 1.4e-28 129.4 90 66.7
Os02g0749450 Oryza sativa ssp. japonica HOM05D006090 ORTHO05D007600 1.8e-28 129.0 90 70.0
Peaxi162Scf01111g00025 Petunia axillaris HOM05D006090 ORTHO05D007600 1.8e-28 129.0 90 66.7
Zm00001eb059180 Zea mays HOM05D006090 ORTHO05D007600 1.8e-28 129.0 90 72.2
Eucgr.A02241 Eucalyptus grandis HOM05D006090 ORTHO05D007600 2.3e-28 128.6 90 68.9
Nitab4.5_0000521g0090 Nicotiana tabacum HOM05D006090 ORTHO05D007600 2.3e-28 128.6 90 65.6
Phvul.002G081100 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 3.1e-28 128.3 90 71.1
BcaC08g43006 Brassica carinata HOM05D006090 ORTHO05D007600 5.2e-28 127.5 91 70.3
C06p02550 Brassica napus HOM05D006090 ORTHO05D007600 5.2e-28 127.5 91 70.3
BolC6t35383H Brassica oleracea HOM05D006090 ORTHO05D007600 1.2e-27 126.3 91 70.3
HPP92_023706 Vanilla planifolia HOM05D006090 ORTHO05D007600 2.0e-27 125.6 87 67.8
BcaB04g21317 Brassica carinata HOM05D006090 ORTHO05D007600 3.4e-27 124.8 87 66.7
Cpa.g.sc71.6 Carica papaya HOM05D006090 ORTHO05D007600 3.4e-27 124.8 84 71.4
unitig_8.g4837 Utricularia gibba HOM05D006090 ORTHO05D007600 1.3e-26 122.9 86 65.1
Ciclev10023078m.g Citrus clementina HOM05D006090 ORTHO05D007600 3.7e-26 121.3 72 80.6
BcaB07g33788 Brassica carinata HOM05D006090 ORTHO05D007600 8.3e-26 120.2 94 64.9
PGSC0003DMG400022770 Solanum tuberosum HOM05D006090 ORTHO05D007600 8.3e-26 120.2 124 50.8
Medtr3g437420 Medicago truncatula HOM05D006090 ORTHO05D007600 2.1e-24 115.5 70 80.0
arahy.Tifrunner.gnm1.ann1.7I8V6Q Arachis hypogaea HOM05D006090 ORTHO05D007600 2.7e-24 115.2 70 80.0
arahy.Tifrunner.gnm1.ann1.NKLH1V Arachis hypogaea HOM05D006090 ORTHO05D007600 3.5e-24 114.8 70 78.6
MELO3C026729.2 Cucumis melo HOM05D006090 ORTHO05D007600 7.8e-24 113.6 79 70.9
Duzib138G1257 Durio zibethinus HOM05D006090 ORTHO05D007600 2.3e-23 112.1 69 76.8
Cpa.g.sc428.3 Carica papaya HOM05D006090 ORTHO05D007600 6.6e-23 110.5 70 74.3
Lj2C1126T3 Lonicera japonica HOM05D006090 ORTHO05D007600 1.1e-22 109.8 63 85.7
CiPaw.02G023500 Carya illinoinensis HOM05D006090 ORTHO05D007600 1.9e-22 109.0 71 81.7
Rhsim13G0047700 Rhododendron simsii HOM05D006090 ORTHO05D007600 2.5e-22 108.6 71 80.3
BraA01t04392Z Brassica rapa HOM05D006090 ORTHO05D007600 3.3e-22 108.2 68 76.5
Haze_15253 Corylus avellana HOM05D006090 ORTHO05D007600 5.6e-22 107.5 77 74.0
Actinidia30052 Actinidia chinensis HOM05D006090 ORTHO05D007600 1.8e-20 102.4 68 72.1
Phvul.009G016400 Phaseolus vulgaris HOM05D006090 ORTHO05D007600 1.8e-20 102.4 66 75.8
Sabra02G0187100 Salix brachista HOM05D006090 ORTHO05D007600 3.4e-19 98.2 60 76.7
Eucgr.K03282 Eucalyptus grandis HOM05D006090 ORTHO05D007600 5.8e-19 97.4 57 80.7
CDE02G0014 Ceratophyllum demersum HOM05D006090 ORTHO05D007600 1.3e-18 96.3 69 66.7
Glyma.18G167500 Glycine max HOM05D006090 ORTHO05D007600 2.2e-18 95.5 68 66.2
Mapoly0057s0028 Marchantia polymorpha HOM05D006090 ORTHO05D007600 3.8e-18 94.7 93 52.7
TAR633G0277 Trochodendron aralioides HOM05D006090 ORTHO05D007600 2.1e-16 89.0 51 82.4
Pp3c20_9690 Physcomitrium patens HOM05D006090 ORTHO05D007600 1.1e-12 76.6 93 43.0
AagrBONN_evm.TU.Sc2ySwM_228.829 Anthoceros agrestis HOM05D006090 ORTHO05D007600 2.4e-12 75.5 89 47.2
arahy.Tifrunner.gnm1.ann1.L6G805 Arachis hypogaea HOM05D006090 ORTHO05D007600 2.0e-11 72.4 53 67.9
Nitab4.5_0001873g0080 Nicotiana tabacum HOM05D006090 ORTHO05D007600 4.2e-09 64.7 47 66.0
arahy.Tifrunner.gnm1.ann1.DI5ISS Arachis hypogaea HOM05D006090 ORTHO05D038896 3.3e-06 55.1 41 65.9
Aa31LG11G3540 Aethionema arabicum HOM05D006090 ORTHO05D007600 5.6e-06 54.3 34 64.7


User provided reference genes

Program Settings