Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G049500 Carya illinoinensis HOM05D004853 ORTHO05D005865 0.0e+00 1109.4 594 100.0
QL09p051756 Quercus lobata HOM05D004853 ORTHO05D005865 1.4e-302 1042.3 593 91.4
QL09p052469 Quercus lobata HOM05D004853 ORTHO05D005865 3.1e-302 1041.2 593 90.9
Cfa004377 Carpinus fangiana HOM05D004853 ORTHO05D005865 1.5e-301 1038.9 594 91.6
CiPaw.02G023000 Carya illinoinensis HOM05D004853 ORTHO05D005865 4.9e-300 1033.9 594 88.7
Haze_15035 Corylus avellana HOM05D004853 ORTHO05D005865 2.7e-298 1028.1 586 91.6
CANSAT01G2121 Cannabis sativa HOM05D004853 ORTHO05D005865 1.1e-288 996.1 598 89.8
Eucgr.H00778 Eucalyptus grandis HOM05D004853 ORTHO05D005865 1.3e-287 992.6 596 87.9
Manes.13G048900 Manihot esculenta HOM05D004853 ORTHO05D005865 1.8e-286 988.8 596 87.6
Sed0013559 Sechium edule HOM05D004853 ORTHO05D005865 2.0e-285 985.3 595 86.2
TAR623G1093 Trochodendron aralioides HOM05D004853 ORTHO05D005865 7.6e-285 983.4 595 83.9
TAR376G0972 Trochodendron aralioides HOM05D004853 ORTHO05D005865 1.3e-284 982.6 595 84.7
ClCG09G008800 Citrullus lanatus HOM05D004853 ORTHO05D005865 1.1e-283 979.5 595 85.0
TWI36G0697 Tripterygium wilfordii HOM05D004853 ORTHO05D005865 2.5e-283 978.4 598 86.1
Potri.015G090600 Populus trichocarpa HOM05D004853 ORTHO05D005865 2.7e-282 974.9 594 85.0
CsaV3_7G026150 Cucumis sativus L. HOM05D004853 ORTHO05D005865 7.9e-282 973.4 595 85.2
MELO3C021058.2 Cucumis melo HOM05D004853 ORTHO05D005865 2.3e-281 971.8 595 84.5
Atru.chr6.1420 Acer truncatum HOM05D004853 ORTHO05D005865 1.9e-280 968.8 595 86.2
Nn7g37081 Nelumbo nucifera HOM05D004853 ORTHO05D005865 2.5e-280 968.4 598 84.4
Ciclev10019411m.g Citrus clementina HOM05D004853 ORTHO05D005865 9.6e-280 966.5 595 84.7
Prupe.8G199700 Prunus persica HOM05D004853 ORTHO05D005865 4.5e-277 957.6 600 85.3
Sabra15G0112700 Salix brachista HOM05D004853 ORTHO05D005865 7.6e-277 956.8 594 83.5
Dinv12655 Davidia involucrata HOM05D004853 ORTHO05D005865 2.9e-276 954.9 595 83.9
MD10G1160500 Malus domestica HOM05D004853 ORTHO05D005865 3.8e-276 954.5 596 85.1
MD05G1172300 Malus domestica HOM05D004853 ORTHO05D005865 1.1e-275 953.0 596 85.1
PSO384G4190 Papaver somniferum HOM05D004853 ORTHO05D005865 2.5e-275 951.8 597 84.6
MBI19_g34091_MAGBIO Magnolia biondii HOM05D004853 ORTHO05D005865 3.9e-273 944.5 594 82.2
RcHm_v2.0_Chr6g0284201 Rosa chinensis HOM05D004853 ORTHO05D005865 7.4e-272 940.3 598 81.6
Duzib133G1132 Durio zibethinus HOM05D004853 ORTHO05D005865 2.8e-271 938.3 598 82.6
Aqoxy1G00113 Aquilegia oxysepala HOM05D004853 ORTHO05D005865 8.2e-271 936.8 594 80.6
Thecc.01G221500 Theobroma cacao HOM05D004853 ORTHO05D005865 8.2e-271 936.8 600 81.2
Hma1.2p1_0226F.1_g095440 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 1.1e-270 936.4 595 83.2
Hma1.2p1_2668F.1_g326580 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 1.1e-270 936.4 595 83.2
AUR62043704 Chenopodium quinoa HOM05D004853 ORTHO05D005865 4.1e-270 934.5 607 76.9
COL.COLO4_15628 Corchorus olitorius HOM05D004853 ORTHO05D005865 5.3e-270 934.1 600 82.7
AUR62038821 Chenopodium quinoa HOM05D004853 ORTHO05D005865 3.4e-269 931.4 607 76.6
CSS0034871 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 7.7e-269 930.2 597 81.1
EL10Ac7g17891 Beta vulgaris HOM05D004853 ORTHO05D005865 2.2e-268 928.7 608 79.3
Gorai.001G232300 Gossypium raimondii HOM05D004853 ORTHO05D005865 2.2e-268 928.7 600 80.3
Gohir.D07G206000 Gossypium hirsutum HOM05D004853 ORTHO05D005865 2.9e-268 928.3 600 80.3
Duzib138G1868 Durio zibethinus HOM05D004853 ORTHO05D005865 1.9e-267 925.6 600 80.8
FvH4_2g18640 Fragaria vesca HOM05D004853 ORTHO05D005865 4.2e-267 924.5 602 80.6
FAN27G1226 Fragaria x ananassa HOM05D004853 ORTHO05D005865 7.2e-267 923.7 602 80.6
Gohir.A07G199600 Gossypium hirsutum HOM05D004853 ORTHO05D005865 7.2e-267 923.7 602 79.9
FAN15G3437 Fragaria x ananassa HOM05D004853 ORTHO05D005865 9.4e-267 923.3 602 80.4
FAN24G1506 Fragaria x ananassa HOM05D004853 ORTHO05D005865 1.6e-266 922.5 600 80.0
Lj3C839T9 Lonicera japonica HOM05D004853 ORTHO05D005865 1.0e-265 919.8 589 80.1
Sc17g0002190 Simmondsia chinensis HOM05D004853 ORTHO05D005865 2.5e-264 915.2 606 79.4
Actinidia09471 Actinidia chinensis HOM05D004853 ORTHO05D005865 3.3e-264 914.8 596 80.4
Cpa.g.sc43.113 Carica papaya HOM05D004853 ORTHO05D005865 8.2e-263 910.2 607 79.9
Rhsim09G0044900 Rhododendron simsii HOM05D004853 ORTHO05D005865 3.1e-262 908.3 598 78.9
Actinidia23713 Actinidia chinensis HOM05D004853 ORTHO05D005865 4.1e-262 907.9 595 79.5
DCAR_004725 Daucus carota HOM05D004853 ORTHO05D005865 9.1e-262 906.7 596 80.0
MSTRG.18839 Avicennia marina HOM05D004853 ORTHO05D005865 2.6e-261 905.2 595 79.7
THA.LOC104808789 Tarenaya hassleriana HOM05D004853 ORTHO05D005865 1.0e-260 903.3 606 79.2
Gorai.007G156000 Gossypium raimondii HOM05D004853 ORTHO05D005865 1.3e-260 902.9 601 78.4
CARHR101430 Cardamine hirsuta HOM05D004853 ORTHO05D005865 3.2e-259 898.3 597 77.9
Sp3g22680 Schrenkiella parvula HOM05D004853 ORTHO05D005865 1.6e-258 896.0 601 77.7
Nitab4.5_0000045g0440 Nicotiana tabacum HOM05D004853 ORTHO05D005865 2.1e-258 895.6 595 78.2
Cc01_g16780 Coffea canephora HOM05D004853 ORTHO05D005865 2.7e-258 895.2 597 77.7
Nitab4.5_0007437g0010 Nicotiana tabacum HOM05D004853 ORTHO05D005865 3.6e-258 894.8 595 77.8
Oeu037767.1 Olea europaea HOM05D004853 ORTHO05D005865 3.6e-258 894.8 595 77.3
BraA03t13534Z Brassica rapa HOM05D004853 ORTHO05D005865 6.1e-258 894.0 598 78.4
Peaxi162Scf00238g00032 Petunia axillaris HOM05D004853 ORTHO05D005865 7.9e-258 893.6 595 78.5
Solyc09g059440.1 Solanum lycopersicum HOM05D004853 ORTHO05D005865 1.4e-257 892.9 595 77.8
Sopen09g022590 Solanum pennellii HOM05D004853 ORTHO05D005865 1.4e-257 892.9 595 78.3
Lsat_1_v5_gn_8_89600 Lactuca sativa HOM05D004853 ORTHO05D005865 2.3e-257 892.1 600 81.0
BcaC06g35779 Brassica carinata HOM05D004853 ORTHO05D005865 5.1e-257 891.0 596 76.2
BolC7t41562H Brassica oleracea HOM05D004853 ORTHO05D005865 5.1e-257 891.0 596 76.2
PGSC0003DMG400027946 Solanum tuberosum HOM05D004853 ORTHO05D005865 8.8e-257 890.2 595 78.5
BcaB06g26724 Brassica carinata HOM05D004853 ORTHO05D005865 3.3e-256 888.3 600 78.0
Ah.15g093470 Amaranthus hybridus HOM05D004853 ORTHO05D005865 5.7e-256 887.5 607 76.4
AT3G25100 Arabidopsis thaliana HOM05D004853 ORTHO05D005865 7.4e-256 887.1 599 77.3
BcaB08g34434 Brassica carinata HOM05D004853 ORTHO05D005865 9.7e-256 886.7 598 78.4
Phvul.008G130700 Phaseolus vulgaris HOM05D004853 ORTHO05D005865 1.3e-255 886.3 593 79.1
AL3G40790 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 2.2e-255 885.6 601 77.7
HanXRQChr10g0288791 Helianthus annuus HOM05D004853 ORTHO05D005865 2.2e-255 885.6 595 81.0
CAN.G128.1 Capsicum annuum HOM05D004853 ORTHO05D005865 1.4e-254 882.9 595 78.7
BcaC01g03244 Brassica carinata HOM05D004853 ORTHO05D005865 1.8e-254 882.5 596 77.3
C03p54420 Brassica napus HOM05D004853 ORTHO05D005865 1.8e-254 882.5 596 77.3
BolC3t17728H Brassica oleracea HOM05D004853 ORTHO05D005865 1.8e-254 882.5 596 77.3
Ca_06554_v3 Cicer arietinum L. HOM05D004853 ORTHO05D005865 3.5e-253 878.2 615 77.4
Thhalv10002454m.g Eutrema salsugineum HOM05D004853 ORTHO05D005865 3.5e-253 878.2 597 76.4
Psat3g148200 Pisum sativum HOM05D004853 ORTHO05D005865 1.3e-252 876.3 609 77.0
Glyma.08G349400 Glycine max HOM05D004853 ORTHO05D005865 2.9e-252 875.2 595 78.3
SGA_v2.0_scaffold18G08333 Striga asiatica HOM05D004853 ORTHO05D005865 1.5e-251 872.8 595 76.6
GSVIVG01000797001 Vitis vinifera HOM05D004853 ORTHO05D005865 1.5e-251 872.8 594 75.4
HanXRQChr14g0439971 Helianthus annuus HOM05D004853 ORTHO05D005865 4.2e-251 871.3 595 79.7
Glyma.18G167000 Glycine max HOM05D004853 ORTHO05D005865 5.5e-251 870.9 593 77.4
Aa31LG8G11930 Aethionema arabicum HOM05D004853 ORTHO05D005865 1.6e-250 869.4 605 75.0
Carub.0003s2543 Capsella rubella HOM05D004853 ORTHO05D005865 1.6e-250 869.4 603 75.8
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 2.1e-250 869.0 587 76.8
SalBow6G4054 Salvia bowleyana HOM05D004853 ORTHO05D005865 3.6e-250 868.2 594 75.3
BraA07t28514Z Brassica rapa HOM05D004853 ORTHO05D005865 4.7e-250 867.8 595 74.3
A07p07260 Brassica napus HOM05D004853 ORTHO05D005865 8.0e-250 867.1 595 74.1
Aa31LG9G4920 Aethionema arabicum HOM05D004853 ORTHO05D005865 1.8e-249 865.9 600 76.5
VMungo1383G0658 Vigna mungo HOM05D004853 ORTHO05D005865 1.5e-248 862.8 593 78.1
Lalb_Chr03g0041521 Lupinus albus HOM05D004853 ORTHO05D005865 1.7e-247 859.4 601 77.0
Medtr7g056153 Medicago truncatula HOM05D004853 ORTHO05D005865 1.2e-245 853.2 604 76.3
unitig_899.g15017 Utricularia gibba HOM05D004853 ORTHO05D005865 1.0e-241 840.1 597 73.4
ECA236G0997 Erigeron canadensis HOM05D004853 ORTHO05D005865 1.2e-240 836.6 597 76.9
unitig_736.g22343 Utricularia gibba HOM05D004853 ORTHO05D005865 1.5e-240 836.3 597 73.2
Migut.D02501 Erythranthe guttata HOM05D004853 ORTHO05D005865 3.5e-237 825.1 601 74.7
CDE04G0889 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 1.0e-236 823.5 595 72.1
TPR.G6418 Trifolium pratense HOM05D004853 ORTHO05D005865 1.7e-236 822.8 644 71.1
A03p44030 Brassica napus HOM05D004853 ORTHO05D005865 2.5e-235 818.9 546 77.3
Lj1g0018468 Lotus japonicus HOM05D004853 ORTHO05D005865 9.4e-235 817.0 606 73.4
C07p10970 Brassica napus HOM05D004853 ORTHO05D005865 1.8e-233 812.8 548 73.5
Gohir.D07G205900 Gossypium hirsutum HOM05D004853 ORTHO05D005865 9.2e-230 800.4 599 72.1
Gohir.A11G139300 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.6e-229 799.7 601 71.9
Dinv19180 Davidia involucrata HOM05D004853 ORTHO05D005865 3.8e-228 795.0 596 72.5
Os11g0128400 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 1.1e-227 793.5 609 70.4
DCAR_004733 Daucus carota HOM05D004853 ORTHO05D005865 3.3e-227 792.0 594 72.7
Os12g0124700 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 2.8e-226 788.9 609 69.3
CAN.G257.5 Capsicum annuum HOM05D004853 ORTHO05D005865 5.2e-225 784.6 870 53.7
Zm00001eb405460 Zea mays HOM05D004853 ORTHO05D005865 5.9e-221 771.2 613 65.9
ATR0068G062 Amborella trichopoda HOM05D004853 ORTHO05D005865 4.0e-217 758.4 594 70.7
SEGI_13565 Sequoiadendron giganteum HOM05D004853 ORTHO05D005865 1.3e-212 743.4 596 66.6
Gorai.001G232100 Gossypium raimondii HOM05D004853 ORTHO05D005865 6.8e-209 731.1 566 68.7
Gohir.D11G145500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 3.4e-200 702.2 476 78.4
AL706U10010 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 7.1e-182 641.3 492 70.7
Gohir.A07G199500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 3.5e-181 639.0 597 61.0
CSS0045377 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 3.0e-172 609.4 517 67.7
SMO307G0064 Selaginella moellendorffii HOM05D004853 ORTHO05D005865 2.2e-159 566.6 602 53.2
Pp3c23_19980 Physcomitrium patens HOM05D004853 ORTHO05D005865 1.6e-157 560.5 598 51.0
Mapoly0045s0042 Marchantia polymorpha HOM05D004853 ORTHO05D005865 3.2e-150 536.2 598 52.2
arahy.Tifrunner.gnm1.ann1.23GIHT Arachis hypogaea HOM05D004853 ORTHO05D005865 1.9e-142 510.4 600 54.0
AagrBONN_evm.TU.Sc2ySwM_117.731 Anthoceros agrestis HOM05D004853 ORTHO05D005865 1.7e-135 487.3 613 43.9
CBR_g40148 Chara braunii HOM05D004853 ORTHO05D005865 4.5e-128 462.6 580 45.9
CAN.G186.62 Capsicum annuum HOM05D004853 ORTHO05D005865 2.8e-93 347.1 209 80.4
CSS0030898 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 2.0e-91 340.9 243 69.5
CBR_g23403 Chara braunii HOM05D004853 ORTHO05D005865 8.9e-84 315.5 324 55.2
MCO03G169 Micromonas commoda HOM05D004853 ORTHO05D005865 5.6e-78 296.2 621 36.7
HPP92_007506 Vanilla planifolia HOM05D004853 ORTHO05D005865 3.0e-71 273.9 234 66.2
CSS0009877 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 7.9e-64 249.2 215 63.3
PRCOL_00002078 Prasinoderma coloniale HOM05D004853 ORTHO05D005865 5.3e-60 236.5 604 28.3
Sabra02G0118100 Salix brachista HOM05D004853 ORTHO05D005865 4.3e-54 216.9 148 75.0
Ah.03g146210 Amaranthus hybridus HOM05D004853 ORTHO05D005865 1.0e-50 205.7 151 68.9
AUR62016553 Chenopodium quinoa HOM05D004853 ORTHO05D005865 6.5e-34 149.8 201 43.3
Cre06.g270250 Chlamydomonas reinhardtii HOM05D004853 ORTHO05D005865 9.4e-33 146.0 622 27.5
Zm00001eb163660 Zea mays HOM05D004853 ORTHO05D005865 3.6e-32 144.1 98 71.4
BraA03t13535Z Brassica rapa HOM05D004853 ORTHO05D005865 3.2e-25 120.9 79 72.2
A03p44050 Brassica napus HOM05D004853 ORTHO05D005865 2.7e-24 117.9 79 70.9
ECA233G3738 Erigeron canadensis HOM05D004853 ORTHO05D005865 1.5e-22 112.1 73 72.6
CAN.G186.61 Capsicum annuum HOM05D004853 ORTHO05D005865 3.8e-18 97.4 210 46.7
CBR_g23402 Chara braunii HOM05D004853 ORTHO05D005865 5.0e-18 97.1 114 44.7
AUR62016554 Chenopodium quinoa HOM05D004853 ORTHO05D005865 9.7e-14 82.8 57 73.7
Zm00001eb163670 Zea mays HOM05D004853 ORTHO05D005865 8.2e-13 79.7 90 47.8
Sabra10G0126900 Salix brachista HOM05D004853 ORTHO05D005865 1.2e-06 59.3 95 37.9


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