Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G037400 Carya illinoinensis HOM05D006100 ORTHO05D007539 3.8e-58 228.0 119 100.0
Haze_15098 Corylus avellana HOM05D006100 ORTHO05D007539 3.9e-31 138.3 117 67.5
CiPaw.02G017200 Carya illinoinensis HOM05D006100 ORTHO05D007539 1.0e-26 123.6 95 73.7
Cfa004303 Carpinus fangiana HOM05D006100 ORTHO05D007539 5.0e-26 121.3 125 60.0
Prupe.7G153900 Prunus persica HOM05D006100 ORTHO05D007539 5.0e-26 121.3 122 59.8
QL06p045927 Quercus lobata HOM05D006100 ORTHO05D007539 5.0e-26 121.3 128 55.5
Thecc.01G036600 Theobroma cacao HOM05D006100 ORTHO05D007539 5.5e-25 117.9 130 56.2
MD02G1148600 Malus domestica HOM05D006100 ORTHO05D007539 1.6e-24 116.3 122 55.7
TWI09G0021 Tripterygium wilfordii HOM05D006100 ORTHO05D007539 2.1e-24 115.9 123 56.9
Phvul.002G029900 Phaseolus vulgaris HOM05D006100 ORTHO05D007539 6.1e-24 114.4 86 69.8
Duzib147G1001 Durio zibethinus HOM05D006100 ORTHO05D007539 1.3e-23 113.2 131 51.9
COL.COLO4_22086 Corchorus olitorius HOM05D006100 ORTHO05D007539 2.3e-23 112.5 130 54.6
Ciclev10026748m.g Citrus clementina HOM05D006100 ORTHO05D007539 3.0e-23 112.1 139 51.8
RcHm_v2.0_Chr2g0101751 Rosa chinensis HOM05D006100 ORTHO05D007539 6.7e-23 110.9 126 57.1
FvH4_1g13390 Fragaria vesca HOM05D006100 ORTHO05D007539 1.1e-22 110.2 111 59.5
FAN19G3207 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.1e-22 110.2 111 59.5
MD15G1262900 Malus domestica HOM05D006100 ORTHO05D007539 1.1e-22 110.2 119 53.8
MD15G1262800 Malus domestica HOM05D006100 ORTHO05D007539 1.5e-22 109.8 77 68.8
FAN28G1903 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.9e-22 109.4 112 58.9
VMungo1215G0978 Vigna mungo HOM05D006100 ORTHO05D007539 3.3e-22 108.6 117 57.3
Aqoxy6G01099 Aquilegia oxysepala HOM05D006100 ORTHO05D007539 7.4e-22 107.5 108 53.7
FAN26G0501 Fragaria x ananassa HOM05D006100 ORTHO05D007539 9.7e-22 107.1 124 50.0
AT5G66780 Arabidopsis thaliana HOM05D006100 ORTHO05D007539 8.2e-21 104.0 104 61.5
BcaB07g29655 Brassica carinata HOM05D006100 ORTHO05D007539 8.2e-21 104.0 107 57.0
FvH4_1g13380 Fragaria vesca HOM05D006100 ORTHO05D007539 8.2e-21 104.0 129 46.5
THA.LOC104821276 Tarenaya hassleriana HOM05D006100 ORTHO05D007539 8.2e-21 104.0 110 55.5
arahy.Tifrunner.gnm1.ann1.L1JEHI Arachis hypogaea HOM05D006100 ORTHO05D007539 1.4e-20 103.2 83 66.3
FAN19G2702 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.4e-20 103.2 129 46.5
Lalb_Chr09g0322441 Lupinus albus HOM05D006100 ORTHO05D007539 1.4e-20 103.2 114 56.1
Atru.chr3.567 Acer truncatum HOM05D006100 ORTHO05D007539 1.8e-20 102.8 127 54.3
Duzib264G0645 Durio zibethinus HOM05D006100 ORTHO05D007539 1.8e-20 102.8 127 48.8
BolC7t43033H Brassica oleracea HOM05D006100 ORTHO05D007539 2.4e-20 102.4 104 58.7
Gohir.A10G094900 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.4e-20 102.4 126 51.6
Dinv39980 Davidia involucrata HOM05D006100 ORTHO05D007539 3.1e-20 102.1 127 50.4
FAN23G1739 Fragaria x ananassa HOM05D006100 ORTHO05D007539 3.1e-20 102.1 129 47.3
CSS0018588 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 4.1e-20 101.7 110 52.7
arahy.Tifrunner.gnm1.ann1.IKK69W Arachis hypogaea HOM05D006100 ORTHO05D007539 5.3e-20 101.3 83 66.3
Lj2g0016254 Lotus japonicus HOM05D006100 ORTHO05D007539 5.3e-20 101.3 109 55.0
BcaC06g34744 Brassica carinata HOM05D006100 ORTHO05D007539 6.9e-20 100.9 104 57.7
C07p25000 Brassica napus HOM05D006100 ORTHO05D007539 6.9e-20 100.9 104 57.7
Lsat_1_v5_gn_4_148381 Lactuca sativa HOM05D006100 ORTHO05D007539 9.0e-20 100.5 68 70.6
Carub.0008s2773 Capsella rubella HOM05D006100 ORTHO05D007539 1.5e-19 99.8 99 60.6
Medtr5g020060 Medicago truncatula HOM05D006100 ORTHO05D007539 1.5e-19 99.8 72 70.8
Psat2g159960 Pisum sativum HOM05D006100 ORTHO05D007539 2.0e-19 99.4 84 63.1
AL8G44670 Arabidopsis lyrata HOM05D006100 ORTHO05D007539 2.6e-19 99.0 102 56.9
Sed0016253 Sechium edule HOM05D006100 ORTHO05D007539 7.7e-19 97.4 82 63.4
FAN28G0382 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.0e-18 97.1 70 67.1
A07p17150 Brassica napus HOM05D006100 ORTHO05D007539 1.7e-18 96.3 104 55.8
BraA07t29442Z Brassica rapa HOM05D006100 ORTHO05D007539 1.7e-18 96.3 104 55.8
HanXRQChr11g0324821 Helianthus annuus HOM05D006100 ORTHO05D007539 2.2e-18 95.9 67 70.1
Aa31LG1G15340 Aethionema arabicum HOM05D006100 ORTHO05D007539 2.9e-18 95.5 69 71.0
BcaB02g09991 Brassica carinata HOM05D006100 ORTHO05D007539 2.9e-18 95.5 71 67.6
RcHm_v2.0_Chr2g0101741 Rosa chinensis HOM05D006100 ORTHO05D007539 2.9e-18 95.5 107 51.4
PGR119G0418 Punica granatum HOM05D006100 ORTHO05D007539 3.8e-18 95.1 133 46.6
CARHR280920 Cardamine hirsuta HOM05D006100 ORTHO05D007539 5.0e-18 94.7 71 67.6
ECA232G0790 Erigeron canadensis HOM05D006100 ORTHO05D007539 5.0e-18 94.7 100 56.0
FAN23G0264 Fragaria x ananassa HOM05D006100 ORTHO05D007539 5.0e-18 94.7 80 65.0
PSO675G2321 Papaver somniferum HOM05D006100 ORTHO05D007539 8.5e-18 94.0 76 65.8
BcaC03g18400 Brassica carinata HOM05D006100 ORTHO05D007539 1.1e-17 93.6 70 67.1
Sp2g29900 Schrenkiella parvula HOM05D006100 ORTHO05D007539 1.1e-17 93.6 101 54.5
FAN26G1330 Fragaria x ananassa HOM05D006100 ORTHO05D007539 1.4e-17 93.2 62 77.4
PGR102G3048 Punica granatum HOM05D006100 ORTHO05D007539 1.9e-17 92.8 99 55.6
Glyma.11G067900 Glycine max HOM05D006100 ORTHO05D007539 3.2e-17 92.0 81 67.9
A02p44400 Brassica napus HOM05D006100 ORTHO05D007539 4.2e-17 91.7 110 51.8
BraA02t09357Z Brassica rapa HOM05D006100 ORTHO05D007539 4.2e-17 91.7 110 51.8
Thhalv10005154m.g Eutrema salsugineum HOM05D006100 ORTHO05D007539 4.2e-17 91.7 99 56.6
C02p64790 Brassica napus HOM05D006100 ORTHO05D007539 7.2e-17 90.9 64 70.3
BolC2t12540H Brassica oleracea HOM05D006100 ORTHO05D007539 7.2e-17 90.9 64 70.3
PSO541G1538 Papaver somniferum HOM05D006100 ORTHO05D007539 9.4e-17 90.5 73 64.4
Gohir.A11G184500 Gossypium hirsutum HOM05D006100 ORTHO05D007539 2.1e-16 89.4 116 49.1
Rhsim08G0115500 Rhododendron simsii HOM05D006100 ORTHO05D007539 2.1e-16 89.4 76 63.2
Actinidia19182 Actinidia chinensis HOM05D006100 ORTHO05D007539 2.7e-16 89.0 98 54.1
Eucgr.I02450 Eucalyptus grandis HOM05D006100 ORTHO05D007539 2.7e-16 89.0 125 48.0
vmacro17841 Vaccinium macrocarpon HOM05D006100 ORTHO05D007539 1.0e-15 87.0 81 58.0
CANSAT01G1084 Cannabis sativa HOM05D006100 ORTHO05D007539 1.8e-15 86.3 82 58.5
Cpa.g.sc6.110 Carica papaya HOM05D006100 ORTHO05D007539 1.8e-15 86.3 89 55.1
Oeu009416.1 Olea europaea HOM05D006100 ORTHO05D007539 2.3e-15 85.9 110 48.2
Gohir.D10G093000 Gossypium hirsutum HOM05D006100 ORTHO05D007539 3.3e-14 82.0 127 46.5
Oeu041448.1 Olea europaea HOM05D006100 ORTHO05D007539 4.3e-14 81.6 110 47.3
Prupe.7G153800 Prunus persica HOM05D006100 ORTHO05D007539 7.4e-14 80.9 68 63.2
MD02G1148700 Malus domestica HOM05D006100 ORTHO05D007539 9.7e-14 80.5 113 46.0
Os03g0723400 Oryza sativa ssp. japonica HOM05D006100 ORTHO05D007539 1.3e-13 80.1 72 58.3
Nn5g29589 Nelumbo nucifera HOM05D006100 ORTHO05D007539 4.8e-13 78.2 114 44.7
ClCG01G019510 Citrullus lanatus HOM05D006100 ORTHO05D007539 8.2e-13 77.4 100 47.0
MSTRG.2759 Avicennia marina HOM05D006100 ORTHO05D007539 1.8e-12 76.3 115 45.2
GSVIVG01018974001 Vitis vinifera HOM05D006100 ORTHO05D007539 1.8e-12 76.3 127 45.7
CsaV3_6G046200 Cucumis sativus L. HOM05D006100 ORTHO05D007539 3.1e-12 75.5 74 58.1
Nitab4.5_0003233g0010 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.2e-11 73.6 108 44.4
Manes.01G135000 Manihot esculenta HOM05D006100 ORTHO05D007539 1.5e-11 73.2 110 45.5
TAR376G0804 Trochodendron aralioides HOM05D001794 ORTHO05D004177 2.0e-11 72.8 89 46.1
Glyma.16G140500 Glycine max HOM05D006100 ORTHO05D007539 3.4e-11 72.0 92 48.9
Solyc02g085330.1 Solanum lycopersicum HOM05D006100 ORTHO05D007539 4.5e-11 71.6 113 46.9
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 4.5e-11 71.6 65 60.0
MBI16_g38642_MAGBIO Magnolia biondii HOM05D006100 ORTHO05D007539 1.3e-10 70.1 85 49.4
Solyc02g062770.2 Solanum lycopersicum HOM05D006100 ORTHO05D007539 3.8e-10 68.6 108 43.5
Sopen02g013800 Solanum pennellii HOM05D006100 ORTHO05D007539 5.0e-10 68.2 107 43.9
SGA_v2.0_scaffold276G46633 Striga asiatica HOM05D006100 ORTHO05D007539 5.0e-10 68.2 77 53.2
Migut.H00995 Erythranthe guttata HOM05D006100 ORTHO05D007539 8.5e-10 67.4 86 50.0
Nitab4.5_0001385g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 8.5e-10 67.4 126 44.4
PGSC0003DMG400015478 Solanum tuberosum HOM05D006100 ORTHO05D007539 8.5e-10 67.4 90 47.8
Nitab4.5_0000434g0150 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.1e-09 67.0 127 44.1
Sopen02g030020 Solanum pennellii HOM05D006100 ORTHO05D007539 1.1e-09 67.0 114 45.6
CAN.G358.97 Capsicum annuum HOM05D006100 ORTHO05D007539 1.4e-09 66.6 93 48.4
CSS0029658 Camellia sinensis var. sinensis HOM05D006100 ORTHO05D007539 1.9e-09 66.2 56 57.1
DCAR_025920 Daucus carota HOM05D006100 ORTHO05D007539 1.9e-09 66.2 67 53.7
Peaxi162Scf00008g03716 Petunia axillaris HOM05D006100 ORTHO05D007539 3.2e-09 65.5 66 53.0
Lj4g0020328 Lotus japonicus HOM05D006100 ORTHO05D007539 7.2e-09 64.3 91 42.9
Peaxi162Scf00515g00519 Petunia axillaris HOM05D006100 ORTHO05D007539 7.2e-09 64.3 107 42.1
unitig_899.g14492 Utricularia gibba HOM05D006100 ORTHO05D007539 7.2e-09 64.3 92 44.6
EL10Ac6g15568 Beta vulgaris HOM05D006100 ORTHO05D007539 1.6e-08 63.2 135 37.8
HanXRQChr16g0530351 Helianthus annuus HOM05D006100 ORTHO05D007539 1.6e-08 63.2 104 39.4
Oeu033643.1 Olea europaea HOM05D006100 ORTHO05D007539 1.6e-08 63.2 56 57.1
unitig_21.g20955 Utricularia gibba HOM05D003234 ORTHO05D003635 1.0e-07 60.5 76 51.3
Gorai.011G102200 Gossypium raimondii HOM05D006100 ORTHO05D007539 1.8e-07 59.7 87 46.0
AUR62007561 Chenopodium quinoa HOM05D006100 ORTHO05D007539 3.0e-07 58.9 136 33.8
AUR62004046 Chenopodium quinoa HOM05D006100 ORTHO05D007539 3.9e-07 58.5 139 36.0
Nitab4.5_0000136g0440 Nicotiana tabacum HOM05D006100 ORTHO05D007539 1.5e-06 56.6 142 35.9
CDE01G0731 Ceratophyllum demersum HOM05D006100 ORTHO05D007539 2.6e-06 55.8 65 50.8


User provided reference genes

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