Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-53 212.2 105 100.0
CiPaw.01G201300 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.0e-48 193.4 104 93.3
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.2e-44 183.0 100 91.0
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 3.6e-28 128.3 76 86.8
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.0e-18 95.9 76 71.1
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.0e-18 95.9 76 71.1
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 3.4e-18 95.1 79 70.9
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.7e-18 94.4 76 68.4
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 5.7e-18 94.4 76 69.7
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 9.8e-18 93.6 79 67.1
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 8.3e-17 90.5 77 70.1
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.0e-16 87.4 79 63.3
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 9.1e-16 87.0 79 62.0
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.6e-15 86.3 76 68.4
QL10p052782 Quercus lobata HOM05D006282 ORTHO05D007460 1.6e-15 86.3 76 67.1
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-15 85.9 79 62.0
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.0e-15 85.9 79 60.8
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 2.0e-15 85.9 76 64.5
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.5e-15 85.1 76 67.1
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.5e-15 85.1 77 64.9
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 4.5e-15 84.7 77 62.3
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-14 83.2 76 64.5
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 1.7e-14 82.8 77 63.6
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 2.2e-14 82.4 76 57.9
QL10p052931 Quercus lobata HOM05D006282 ORTHO05D007460 2.2e-14 82.4 76 63.2
Cfa015252 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-14 82.0 76 68.4
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 2.9e-14 82.0 79 54.4
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.8e-14 81.6 76 57.9
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.0e-14 81.3 76 64.5
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.0e-14 81.3 76 57.9
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 6.5e-14 80.9 77 62.3
Cfa015246 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.1e-13 80.1 76 67.1
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.5e-13 79.7 73 64.4
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.5e-13 79.7 76 59.2
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.5e-13 79.7 76 59.2
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.9e-13 79.3 80 57.5
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 2.5e-13 79.0 76 57.9
QL10p052947 Quercus lobata HOM05D006282 ORTHO05D007460 2.5e-13 79.0 76 61.8
Cfa015248 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.2e-13 78.6 76 65.8
QL10p052897 Quercus lobata HOM05D006282 ORTHO05D007460 3.2e-13 78.6 73 64.4
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.2e-13 78.2 76 61.8
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.2e-13 78.2 77 62.3
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 5.5e-13 77.8 83 59.0
QL10p052834 Quercus lobata HOM05D006282 ORTHO05D007460 5.5e-13 77.8 73 64.4
QL10p052856 Quercus lobata HOM05D006282 ORTHO05D007460 5.5e-13 77.8 76 61.8
QL10p052881 Quercus lobata HOM05D006282 ORTHO05D007460 5.5e-13 77.8 76 59.2
Cfa015253 Carpinus fangiana HOM05D006282 ORTHO05D007460 7.2e-13 77.4 76 64.5
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 1.2e-12 76.6 72 58.3
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.6e-12 76.3 76 56.6
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 2.1e-12 75.9 76 55.3
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-12 75.5 76 61.8
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 2.7e-12 75.5 74 52.7
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 2.7e-12 75.5 68 54.4
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-12 75.5 76 55.3
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 2.7e-12 75.5 76 53.9
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 4.7e-12 74.7 76 53.9
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 6.1e-12 74.3 74 54.1
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.0e-11 73.6 76 55.3
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 1.0e-11 73.6 74 56.8
Cc00_g33840 Coffea canephora HOM05D006282 ORTHO05D007460 1.4e-11 73.2 77 54.5
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.4e-11 73.2 65 47.7
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.8e-11 72.8 77 54.5
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 1.8e-11 72.8 75 58.7
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 3.0e-11 72.0 80 50.0
Cfa015238 Carpinus fangiana HOM05D006282 ORTHO05D007460 6.8e-11 70.9 76 63.2
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 6.8e-11 70.9 74 50.0
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 8.8e-11 70.5 77 51.9
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 8.8e-11 70.5 76 52.6
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 1.2e-10 70.1 59 62.7
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 1.2e-10 70.1 76 52.6
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-10 70.1 76 52.6
MBI07_g38402_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 1.5e-10 69.7 64 50.0
Cfa015242 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.0e-10 69.3 71 64.8
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 2.0e-10 69.3 76 48.7
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-10 68.6 70 58.6
QL10p053038 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-10 68.6 72 56.9
QL10p053061 Quercus lobata HOM05D006282 ORTHO05D007460 3.4e-10 68.6 70 54.3
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 4.4e-10 68.2 66 54.5
Rhsim02G0083100 Rhododendron simsii HOM05D006282 ORTHO05D007460 4.4e-10 68.2 71 56.3
Cc03_g13680 Coffea canephora HOM05D006282 ORTHO05D007460 5.7e-10 67.8 77 51.9
Cfa015241 Carpinus fangiana HOM05D006282 ORTHO05D007460 9.8e-10 67.0 80 60.0
Cc00_g15280 Coffea canephora HOM05D006282 ORTHO05D007460 9.8e-10 67.0 77 51.9
QL10p053004 Quercus lobata HOM05D006282 ORTHO05D007460 9.8e-10 67.0 69 59.4
TAR362G0908 Trochodendron aralioides HOM05D006282 ORTHO05D007460 1.3e-09 66.6 71 50.7
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 3.7e-09 65.1 76 47.4
Hma1.2p1_3261F.1_g334650 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 4.9e-09 64.7 76 52.6
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 6.3e-09 64.3 76 47.4
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 8.3e-09 63.9 76 50.0
Nn1g09676 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.8e-08 62.8 76 43.4
Cfa015232 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.4e-08 62.4 77 57.1
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 4.1e-08 61.6 61 52.5
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 4.1e-08 61.6 84 51.2
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 5.4e-08 61.2 91 44.0
ClCG07G015130 Citrullus lanatus HOM05D002360 ORTHO05D006971 5.4e-08 61.2 68 45.6
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 5.4e-08 61.2 77 51.9
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 7.0e-08 60.8 81 45.7
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 7.0e-08 60.8 81 46.9
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 9.2e-08 60.5 68 45.6
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 9.2e-08 60.5 82 46.3
Lsat_1_v5_gn_9_60260 Lactuca sativa HOM05D006282 ORTHO05D007460 1.2e-07 60.1 70 44.3
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 1.2e-07 60.1 77 48.1
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 1.6e-07 59.7 83 50.6
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 2.0e-07 59.3 74 41.9
Cfa015237 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-07 58.9 73 57.5
Haze_01385 Corylus avellana HOM05D006282 ORTHO05D007460 2.7e-07 58.9 66 50.0
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 2.7e-07 58.9 77 50.6
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 4.5e-07 58.2 83 49.4
QL10p053025 Quercus lobata HOM05D006282 ORTHO05D007460 1.3e-06 56.6 74 54.1
Eucgr.H00332 Eucalyptus grandis HOM05D006282 ORTHO05D007460 2.3e-06 55.8 66 47.0
MBI07_g38404_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-06 55.8 51 51.0
QL10p053034 Quercus lobata HOM05D006282 ORTHO05D007460 2.3e-06 55.8 74 52.7
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 2.3e-06 55.8 77 48.1
Cfa015255 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.9e-06 55.5 67 50.7
Eucgr.H00330 Eucalyptus grandis HOM05D006282 ORTHO05D007460 2.9e-06 55.5 69 44.9
Cfa015236 Carpinus fangiana HOM05D006282 ORTHO05D007460 5.0e-06 54.7 75 57.3
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 5.0e-06 54.7 77 48.1


User provided reference genes

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