Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 1.6e-89 332.8 180 100.0
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 3.7e-57 225.3 172 73.3
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 1.5e-55 219.9 180 68.3
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 1.5e-55 219.9 178 68.0
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 3.2e-53 212.2 180 66.7
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 1.2e-52 210.3 246 54.5
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 5.2e-51 204.9 181 67.4
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 8.8e-51 204.1 180 67.2
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 1.5e-50 203.4 178 64.0
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 4.4e-50 201.8 178 63.5
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 5.7e-50 201.4 176 63.6
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 5.7e-50 201.4 178 62.9
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 4.8e-49 198.4 184 63.0
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 6.3e-49 198.0 184 64.1
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 4.1e-48 195.3 184 62.0
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 4.1e-48 195.3 178 63.5
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 7.0e-48 194.5 179 61.5
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 7.0e-48 194.5 185 62.2
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 1.2e-47 193.7 179 60.9
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.6e-47 193.4 180 63.9
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 2.6e-47 192.6 178 63.5
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 4.5e-47 191.8 184 62.0
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 1.0e-46 190.7 178 61.8
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 1.7e-46 189.9 179 61.5
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 1.7e-46 189.9 179 62.6
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 5.0e-46 188.3 176 60.2
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 1.1e-45 187.2 185 60.0
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.9e-45 186.4 179 64.2
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 5.5e-45 184.9 177 61.6
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 7.2e-45 184.5 178 60.1
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 7.2e-45 184.5 175 60.0
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 7.2e-45 184.5 179 58.7
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 9.4e-45 184.1 179 62.6
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 1.2e-44 183.7 179 58.1
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 1.6e-44 183.3 179 57.5
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 2.7e-44 182.6 183 60.7
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 3.6e-44 182.2 179 57.5
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 6.1e-44 181.4 179 63.7
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 3.0e-43 179.1 178 57.9
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 4.0e-43 178.7 186 58.1
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 6.7e-43 177.9 178 60.7
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 1.2e-42 177.2 184 58.2
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 1.2e-42 177.2 180 61.7
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 1.5e-42 176.8 178 55.6
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 1.5e-42 176.8 188 57.4
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 5.7e-42 174.9 179 57.5
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 9.7e-42 174.1 179 60.3
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 9.7e-42 174.1 179 60.3
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 2.8e-41 172.6 181 59.7
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 8.2e-41 171.0 187 57.2
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 1.1e-40 170.6 183 57.4
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 1.8e-40 169.9 177 55.4
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 5.3e-40 168.3 174 59.8
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 2.7e-39 166.0 183 59.0
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.7e-38 163.3 179 57.0
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 3.8e-38 162.2 181 54.7
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 5.0e-38 161.8 137 65.0
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 8.5e-38 161.0 184 52.7
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 1.9e-37 159.8 188 53.2
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 3.2e-37 159.1 182 53.8
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 7.2e-37 157.9 181 54.7
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 7.2e-37 157.9 180 57.8
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 9.4e-37 157.5 178 55.6
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.6e-36 156.8 178 55.1
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 3.6e-36 155.6 276 40.9
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 6.1e-36 154.8 180 54.4
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 8.0e-36 154.5 142 64.8
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 1.5e-34 150.2 173 52.6
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 3.4e-34 149.1 180 54.4
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 5.7e-34 148.3 172 52.3
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.7e-33 146.7 174 54.6
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.8e-33 146.0 184 49.5
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 4.1e-32 142.1 183 50.8
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 4.1e-32 142.1 199 47.7
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.0e-30 137.5 141 56.7
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 1.3e-30 137.1 181 47.5
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 1.3e-30 137.1 189 45.0
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 5.0e-30 135.2 185 45.9
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 5.0e-30 135.2 186 48.9
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 1.1e-29 134.0 98 74.5
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 1.5e-29 133.7 180 46.7
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 1.5e-29 133.7 186 45.2
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 1.5e-29 133.7 182 46.7
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 1.9e-29 133.3 165 49.7
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 5.5e-29 131.7 179 48.6
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 9.5e-29 131.0 147 54.4
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 9.5e-29 131.0 126 61.9
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 2.1e-28 129.8 161 47.2
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 3.6e-28 129.0 179 45.8
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 1.4e-27 127.1 175 48.0
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 1.8e-27 126.7 179 45.8
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 1.8e-27 126.7 179 45.8
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 6.8e-27 124.8 181 44.8
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.2e-26 124.0 167 46.7
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 5.7e-26 121.7 167 45.5
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 5.7e-26 121.7 167 45.5
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 5.7e-26 121.7 174 47.7
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 7.5e-26 121.3 167 46.1
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 9.8e-26 120.9 182 46.7
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 1.1e-24 117.5 184 44.6
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 1.4e-24 117.1 231 40.3
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 2.0e-23 113.2 221 38.5
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 5.0e-22 108.6 170 44.7
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 8.9e-19 97.8 78 65.4
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 2.6e-18 96.3 170 41.2
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 9.8e-18 94.4 98 55.1
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 1.3e-17 94.0 98 54.1
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 2.9e-17 92.8 138 46.4
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 2.9e-17 92.8 138 46.4
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 1.0e-14 84.3 181 37.0
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 9.5e-13 77.8 77 55.8
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 8.0e-12 74.7 71 59.2
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 4.4e-10 68.9 126 44.4
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 2.2e-09 66.6 56 57.1
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 4.9e-09 65.5 84 45.2
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 7.0e-08 61.6 52 55.8


User provided reference genes

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