Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 7.5e-197 690.3 332 100.0
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 7.7e-186 653.7 332 95.8
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 2.5e-160 568.9 334 81.4
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 6.2e-159 564.3 335 81.2
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 1.8e-158 562.8 333 79.0
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 2.3e-158 562.4 332 79.2
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 3.1e-158 562.0 332 80.4
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.1e-158 562.0 332 80.4
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.1e-158 562.0 332 80.4
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.2e-157 560.1 332 80.1
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.6e-157 558.9 332 80.1
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 4.4e-157 558.1 333 81.4
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 7.5e-157 557.4 332 78.6
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 7.5e-157 557.4 330 79.4
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 2.2e-156 555.8 335 79.7
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.4e-155 553.1 332 78.9
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 2.1e-154 549.3 335 78.8
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 2.1e-154 549.3 332 79.2
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 1.3e-153 546.6 335 78.2
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 3.9e-153 545.0 332 77.4
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 6.6e-153 544.3 331 77.9
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 2.5e-152 542.3 329 78.7
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 2.5e-152 542.3 329 79.0
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 3.3e-152 542.0 335 76.7
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 3.3e-152 542.0 332 77.1
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 4.3e-152 541.6 336 79.5
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 8.1e-151 537.3 325 78.2
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.1e-150 537.0 297 86.2
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 4.0e-150 535.0 334 76.3
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 5.2e-150 534.6 334 76.3
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 1.5e-149 533.1 334 77.5
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 2.6e-149 532.3 331 78.5
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 7.6e-149 530.8 331 74.9
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 1.3e-148 530.0 330 78.8
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 2.9e-148 528.9 308 80.2
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 4.9e-148 528.1 325 78.2
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 1.1e-147 526.9 313 79.6
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 1.1e-147 526.9 330 78.8
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.9e-147 526.2 336 74.4
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 3.5e-146 521.9 326 77.9
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 6.0e-146 521.2 336 74.4
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 1.0e-145 520.4 297 82.2
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 1.7e-145 519.6 333 75.1
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 1.7e-145 519.6 334 74.0
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 2.3e-145 519.2 301 80.7
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 3.0e-145 518.8 310 78.7
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 3.9e-145 518.5 337 75.7
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 6.6e-145 517.7 300 79.3
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 6.6e-145 517.7 334 74.0
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 8.6e-145 517.3 334 74.0
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 1.9e-144 516.2 335 74.6
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 3.3e-144 515.4 328 75.3
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 1.6e-143 513.1 331 74.3
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 2.8e-143 512.3 335 74.0
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 4.7e-143 511.5 346 72.0
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 6.2e-143 511.1 329 74.8
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 8.1e-143 510.8 329 74.8
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 1.8e-142 509.6 333 73.9
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 1.8e-142 509.6 301 80.7
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 5.2e-142 508.1 328 74.4
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 5.2e-142 508.1 328 74.4
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 2.0e-141 506.1 301 78.4
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.6e-141 505.8 318 76.7
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 3.4e-141 505.4 339 72.3
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 5.8e-141 504.6 370 68.9
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 7.6e-141 504.2 301 79.4
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 9.9e-141 503.8 328 73.8
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 3.2e-139 498.8 326 74.2
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 9.3e-139 497.3 326 74.2
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 9.3e-139 497.3 306 77.1
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 3.9e-137 491.9 333 72.7
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 3.9e-137 491.9 333 72.7
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 2.8e-135 485.7 333 71.5
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 1.4e-134 483.4 333 71.5
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 2.6e-133 479.2 300 74.3
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 1.7e-132 476.5 287 80.1
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 1.7e-132 476.5 319 73.0
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 1.7e-132 476.5 289 77.5
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 3.2e-131 472.2 300 74.0
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 5.4e-131 471.5 297 74.4
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 1.8e-126 456.4 261 83.5
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 5.8e-125 451.4 277 77.6
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 1.6e-122 443.4 276 76.1
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 2.3e-121 439.5 243 85.2
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 2.1e-119 433.0 295 70.2
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 1.7e-116 423.3 340 65.6
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 2.9e-116 422.5 243 81.5
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 4.9e-116 421.8 243 81.9
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 4.2e-115 418.7 294 70.4
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 1.6e-114 416.8 295 66.8
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.8e-113 413.3 252 77.8
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 5.1e-113 411.8 263 74.1
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 6.7e-113 411.4 293 65.9
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.1e-110 404.1 295 64.1
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.4e-110 403.7 253 73.9
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.4e-110 403.7 325 60.0
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 5.5e-107 391.7 293 63.5
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.9e-91 340.1 206 76.7
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.1e-90 336.7 260 64.6
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 9.7e-88 327.8 210 73.3
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.1e-86 322.4 184 78.8
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 2.1e-82 310.1 238 65.1
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 2.0e-69 266.9 172 79.1
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 4.4e-64 249.2 138 87.0
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.7e-63 247.3 172 68.6
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.4e-62 243.4 209 61.2
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 1.6e-61 240.7 328 43.6
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 5.0e-60 235.7 297 43.8
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 1.0e-57 228.0 206 62.1
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 1.6e-50 204.1 130 75.4
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 2.1e-50 203.8 184 64.1
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 8.9e-49 198.4 286 43.4
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 8.3e-47 191.8 310 38.1
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 3.9e-44 183.0 164 64.0
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.5e-40 171.0 277 36.8
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.1e-38 164.9 84 91.7
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 2.4e-25 120.6 159 42.1
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 5.4e-22 109.4 279 30.8
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.3e-20 104.8 95 63.2
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 2.2e-15 87.4 57 73.7
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.8e-12 77.8 54 61.1
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 2.3e-12 77.4 43 83.7
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.8e-09 67.8 41 68.3
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 7.6e-08 62.4 31 93.5


User provided reference genes

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