Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G021300 Carya illinoinensis HOM05D007434 ORTHO05D009541 6.8e-50 200.3 97 100.0
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 7.1e-15 84.0 89 55.1
QL06p042201 Quercus lobata HOM05D007434 ORTHO05D009541 1.6e-14 82.8 86 59.3
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 3.5e-14 81.6 93 52.7
FAN26G1295 Fragaria x ananassa HOM05D007434 ORTHO05D019139 6.0e-14 80.9 106 44.3
FAN28G0171 Fragaria x ananassa HOM05D007434 ORTHO05D009541 6.0e-14 80.9 106 44.3
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 6.7e-13 77.4 88 50.0
DCAR_025721 Daucus carota HOM05D007434 ORTHO05D009541 1.1e-12 76.6 80 48.8
Atru.chr3.395 Acer truncatum HOM05D007434 ORTHO05D013638 2.5e-12 75.5 91 50.5
FvH4_1g15720 Fragaria vesca HOM05D007434 ORTHO05D009541 7.4e-12 73.9 81 48.1
FAN19G1812 Fragaria x ananassa HOM05D007434 ORTHO05D019139 7.4e-12 73.9 81 48.1
Glyma.17G176500 Glycine max HOM05D007434 ORTHO05D009541 7.4e-12 73.9 79 49.4
Thecc.01G053200 Theobroma cacao HOM05D007434 ORTHO05D009541 7.4e-12 73.9 86 50.0
Potri.007G041400 Populus trichocarpa HOM05D007434 ORTHO05D009541 1.3e-11 73.2 94 46.8
Phvul.003G245601 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 1.6e-11 72.8 80 47.5
Glyma.05G083900 Glycine max HOM05D007434 ORTHO05D009541 2.8e-11 72.0 78 48.7
Lalb_Chr05g0213221 Lupinus albus HOM05D007434 ORTHO05D009541 8.2e-11 70.5 87 48.3
Oeu050758.1 Olea europaea HOM05D007434 ORTHO05D009541 8.2e-11 70.5 83 45.8
ClCG01G016720 Citrullus lanatus HOM05D007434 ORTHO05D009541 1.4e-10 69.7 79 48.1
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 2.4e-10 68.9 88 43.2
TPR.G19007 Trifolium pratense HOM05D007434 ORTHO05D009541 1.2e-09 66.6 81 40.7
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 2.0e-09 65.9 85 45.9
Lj2g0001941 Lotus japonicus HOM05D007434 ORTHO05D009541 2.0e-09 65.9 89 42.7
Atru.chr3.392 Acer truncatum HOM05D007434 ORTHO05D009541 2.6e-09 65.5 87 40.2
Lj4g0023681 Lotus japonicus HOM05D007434 ORTHO05D009541 2.6e-09 65.5 96 41.7
Sed0004872 Sechium edule HOM05D007434 ORTHO05D009541 2.6e-09 65.5 79 45.6
Aqoxy6G01380 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 4.5e-09 64.7 83 43.4
CsaV3_6G043140 Cucumis sativus L. HOM05D007434 ORTHO05D009541 4.5e-09 64.7 98 43.9
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 4.5e-09 64.7 85 42.4
Sed0002185 Sechium edule HOM05D007434 ORTHO05D009541 4.5e-09 64.7 83 47.0
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 7.6e-09 63.9 96 37.5
Gohir.A11G190600 Gossypium hirsutum HOM05D007434 ORTHO05D009541 2.2e-08 62.4 90 45.6
Atru.chr3.394 Acer truncatum HOM05D007434 ORTHO05D009541 2.9e-08 62.0 85 40.0
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 2.9e-08 62.0 90 37.8
Rhsim08G0102100 Rhododendron simsii HOM05D007434 ORTHO05D009541 3.8e-08 61.6 104 38.5
Solyc03g044530.1 Solanum lycopersicum HOM05D007434 ORTHO05D009541 3.8e-08 61.6 108 40.7
Gorai.007G211200 Gossypium raimondii HOM05D007434 ORTHO05D009541 6.5e-08 60.8 85 44.7
Prupe.7G136100 Prunus persica HOM05D007434 ORTHO05D013638 6.5e-08 60.8 98 42.9
arahy.Tifrunner.gnm1.ann1.68HAUH Arachis hypogaea HOM05D048825 ORTHO05D009541 8.5e-08 60.5 84 39.3
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 8.5e-08 60.5 87 40.2
Aqoxy6G01382 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 1.1e-07 60.1 82 41.5
Glyma.01G184800 Glycine max HOM05D007434 ORTHO05D009541 1.1e-07 60.1 90 44.4
Gohir.D11G197400 Gossypium hirsutum HOM05D007434 ORTHO05D009541 1.1e-07 60.1 85 43.5
arahy.Tifrunner.gnm1.ann1.M8F4SW Arachis hypogaea HOM05D048825 ORTHO05D009541 1.4e-07 59.7 84 39.3
CSS0004315 Camellia sinensis var. sinensis HOM05D035102 ORTHO05D016155 1.4e-07 59.7 85 37.6
Dinv39336 Davidia involucrata HOM05D035102 ORTHO05D016155 1.4e-07 59.7 97 37.1
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 1.9e-07 59.3 101 35.6
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 1.9e-07 59.3 83 39.8
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 1.9e-07 59.3 87 37.9
Gohir.A11G046200 Gossypium hirsutum HOM05D007434 ORTHO05D009541 2.5e-07 58.9 87 42.5
Nn5g30204 Nelumbo nucifera HOM05D007434 ORTHO05D009541 2.5e-07 58.9 102 38.2
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 2.5e-07 58.9 97 39.2
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 3.2e-07 58.5 84 40.5
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 3.2e-07 58.5 88 38.6
Sc03g0001440 Simmondsia chinensis HOM05D012520 ORTHO05D013638 3.2e-07 58.5 99 43.4
Oeu049318.1 Olea europaea HOM05D007434 ORTHO05D009541 4.2e-07 58.2 64 48.4
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 4.2e-07 58.2 85 37.6
COL.COLO4_11386 Corchorus olitorius HOM05D007434 ORTHO05D009541 5.5e-07 57.8 88 34.1
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 5.5e-07 57.8 81 37.0
Glyma.11G057400 Glycine max HOM05D007434 ORTHO05D009541 7.2e-07 57.4 92 46.7
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 7.2e-07 57.4 106 35.8
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 7.2e-07 57.4 105 36.2
Lalb_Chr14g0368851 Lupinus albus HOM05D012250 ORTHO05D014447 1.2e-06 56.6 78 44.9
CARHR280850 Cardamine hirsuta HOM05D012520 ORTHO05D013638 1.6e-06 56.2 79 35.4
Actinidia12059 Actinidia chinensis HOM05D027733 ORTHO05D030888 2.1e-06 55.8 69 47.8
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 2.1e-06 55.8 88 35.2
Lsat_1_v5_gn_4_167700 Lactuca sativa HOM05D007434 ORTHO05D009541 2.1e-06 55.8 82 35.4
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 2.1e-06 55.8 101 33.7
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 2.7e-06 55.5 83 36.1
Aqoxy6G01381 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 3.6e-06 55.1 91 38.5
Ah.03g144580 Amaranthus hybridus HOM05D007434 ORTHO05D060011 4.6e-06 54.7 94 36.2
arahy.Tifrunner.gnm1.ann1.0D7IHD Arachis hypogaea HOM05D007434 ORTHO05D009541 4.6e-06 54.7 88 37.5
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 6.1e-06 54.3 109 35.8
Haze_17565 Corylus avellana HOM05D016981 ORTHO05D016155 7.9e-06 53.9 82 37.8
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 7.9e-06 53.9 83 34.9
TAR628G0228 Trochodendron aralioides HOM05D007434 ORTHO05D016155 7.9e-06 53.9 82 45.1


User provided reference genes

Program Settings