Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 0.0e+00 1326.6 701 100.0
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 0.0e+00 1124.0 729 83.3
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.3e-309 1065.1 723 79.5
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 3.8e-283 978.0 730 72.6
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 9.6e-279 963.4 727 73.3
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 2.6e-276 955.3 727 71.3
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 4.5e-276 954.5 729 72.8
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.1e-274 949.9 730 72.2
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 3.5e-273 944.9 726 70.4
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 5.1e-272 941.0 731 71.8
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 5.1e-272 941.0 723 70.3
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 8.7e-272 940.3 729 70.2
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 2.8e-270 935.3 729 69.5
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 4.8e-270 934.5 727 69.7
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 6.9e-269 930.6 731 71.0
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 1.2e-268 929.9 730 70.7
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 2.0e-268 929.1 729 68.3
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 3.4e-268 928.3 732 70.1
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 2.2e-267 925.6 728 70.2
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 6.5e-267 924.1 729 68.6
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 1.9e-266 922.5 732 67.6
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 3.2e-266 921.8 729 68.2
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 7.2e-266 920.6 718 69.4
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 9.4e-266 920.2 728 68.8
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 9.4e-266 920.2 729 67.8
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 2.7e-265 918.7 726 69.0
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 6.1e-265 917.5 730 68.6
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 1.0e-264 916.8 727 69.6
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.4e-264 916.4 725 67.4
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 3.0e-264 915.2 592 80.4
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 3.9e-264 914.8 716 70.5
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 2.0e-263 912.5 726 68.6
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 2.5e-263 912.1 729 71.1
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 9.7e-263 910.2 727 69.6
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 1.7e-262 909.4 720 69.2
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 6.9e-261 904.0 728 69.5
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 7.7e-260 900.6 728 69.1
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 5.0e-259 897.9 722 69.8
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.0e-259 897.9 728 69.0
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 8.5e-259 897.1 728 69.5
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.9e-258 896.0 728 69.4
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 9.4e-258 893.6 731 68.1
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 3.9e-256 888.3 735 68.0
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.7e-256 887.5 705 69.1
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 5.7e-255 884.4 733 65.5
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 6.3e-254 880.9 744 67.1
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.2e-252 876.7 705 68.5
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.9e-251 872.1 717 66.7
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.5e-250 869.0 715 66.6
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 4.7e-249 864.8 801 62.4
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.7e-249 864.8 715 66.3
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 3.0e-248 862.1 724 66.9
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 6.7e-248 860.9 637 73.2
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 1.3e-246 856.7 725 65.5
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 6.7e-240 834.3 951 53.8
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 9.7e-239 830.5 730 64.5
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.7e-238 829.7 730 64.8
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 1.2e-236 823.5 730 61.6
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 2.0e-236 822.8 730 63.4
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 5.9e-236 821.2 732 65.0
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 2.5e-234 815.8 730 61.2
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 2.2e-230 802.7 725 64.1
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 2.8e-230 802.4 721 63.0
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 4.8e-230 801.6 723 61.1
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 7.0e-229 797.7 724 59.9
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.6e-228 796.6 732 63.0
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 3.8e-227 792.0 738 60.6
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 9.5e-226 787.3 938 52.3
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 1.6e-225 786.6 696 63.6
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 6.1e-225 784.6 736 61.3
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 8.0e-225 784.3 727 63.1
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.0e-224 783.9 706 62.5
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 3.0e-224 782.3 726 63.4
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 5.2e-224 781.6 713 61.9
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 6.8e-224 781.2 722 63.3
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 2.6e-223 779.2 775 58.7
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 4.4e-223 778.5 734 60.1
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 3.5e-220 768.8 723 61.7
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 1.2e-217 760.4 733 58.5
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 8.0e-217 757.7 734 58.4
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 2.6e-215 752.7 732 59.8
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 7.0e-213 744.6 713 60.6
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 7.0e-213 744.6 727 60.1
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 1.2e-212 743.8 727 57.8
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.6e-212 743.4 732 57.5
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 2.0e-212 743.0 713 59.5
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 3.5e-212 742.3 738 59.8
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 3.0e-211 739.2 727 57.4
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 1.1e-210 737.3 728 57.6
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 2.5e-210 736.1 727 57.6
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 1.2e-209 733.8 727 57.6
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 8.9e-208 727.6 568 70.6
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 1.7e-206 723.4 751 55.8
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.1e-202 710.7 590 65.9
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.5e-199 700.3 554 69.1
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 1.3e-198 697.2 710 56.9
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 2.2e-198 696.4 742 55.7
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 1.0e-195 687.6 707 57.3
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.6e-193 680.2 625 60.2
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.8e-190 669.1 620 59.5
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 4.3e-186 655.6 714 54.6
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 2.1e-185 653.3 537 65.0
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 1.7e-166 590.5 600 59.7
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 1.4e-165 587.4 597 56.6
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 2.4e-152 543.5 523 61.6
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 2.2e-145 520.4 465 65.6
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 5.2e-131 472.6 800 39.2
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 4.4e-130 469.5 775 40.4
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 2.3e-110 404.1 701 36.9
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 2.9e-97 360.5 305 61.6
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 2.3e-94 350.9 279 63.8
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.4e-91 341.7 424 49.8
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.6e-84 318.2 298 62.4
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 6.6e-78 296.2 443 44.2
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 2.1e-60 238.0 355 46.5
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 2.8e-60 237.7 182 68.7
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 6.9e-59 233.0 192 63.0
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 3.0e-54 217.6 265 52.5
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 3.5e-47 194.1 162 74.1
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 4.8e-44 183.7 143 67.8
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 2.4e-43 181.4 154 59.1
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.3e-41 175.6 136 78.7
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 2.1e-39 168.3 97 87.6
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 1.3e-38 165.6 135 76.3
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 2.9e-33 147.9 107 74.8
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 4.6e-31 140.6 135 61.5
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 3.9e-30 137.5 134 58.2
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.3e-21 107.8 114 50.9
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 2.2e-12 78.6 99 48.5
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 6.1e-07 60.5 139 33.1


User provided reference genes

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