Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.01G015700 Carya illinoinensis HOM05D000654 ORTHO05D002711 4.9e-83 311.6 224 100.0
CiPaw.01G015400 Carya illinoinensis HOM05D000654 ORTHO05D002711 1.6e-49 200.3 178 95.5
Cfa004040 Carpinus fangiana HOM05D000654 ORTHO05D002711 3.0e-32 142.9 190 49.5
QL06p040712 Quercus lobata HOM05D000654 ORTHO05D002711 1.9e-26 123.6 195 43.1
CiPaw.02G007300 Carya illinoinensis HOM05D000654 ORTHO05D002711 5.5e-26 122.1 193 42.5
Dinv30010 Davidia involucrata HOM05D000654 ORTHO05D002711 7.4e-23 111.7 195 49.2
TAR625G0928 Trochodendron aralioides HOM05D000654 ORTHO05D002711 6.9e-21 105.1 194 50.5
Dinv26842 Davidia involucrata HOM05D000654 ORTHO05D002711 1.2e-20 104.4 196 42.3
Manes.12G106300 Manihot esculenta HOM05D000654 ORTHO05D002711 5.0e-19 99.0 195 41.5
FvH4_1g16340 Fragaria vesca HOM05D000654 ORTHO05D002711 6.5e-19 98.6 194 52.1
FAN23G2009 Fragaria x ananassa HOM05D000654 ORTHO05D002711 1.1e-18 97.8 194 53.6
TAR381G1297 Trochodendron aralioides HOM05D000654 ORTHO05D002711 1.1e-18 97.8 202 38.1
FAN28G1367 Fragaria x ananassa HOM05D000654 ORTHO05D002711 2.5e-18 96.7 196 48.0
FAN19G0868 Fragaria x ananassa HOM05D000654 ORTHO05D002711 3.2e-18 96.3 196 50.0
RcHm_v2.0_Chr2g0106201 Rosa chinensis HOM05D000654 ORTHO05D002711 3.2e-18 96.3 193 46.1
FAN26G1873 Fragaria x ananassa HOM05D000654 ORTHO05D002711 7.2e-18 95.1 196 51.5
MD15G1286300 Malus domestica HOM05D000654 ORTHO05D002711 9.3e-18 94.7 176 36.4
Manes.13G121000 Manihot esculenta HOM05D000654 ORTHO05D002711 2.7e-17 93.2 195 36.4
Lj4A152G33 Lonicera japonica HOM05D000654 ORTHO05D002711 6.1e-17 92.0 174 39.1
MD02G1175900 Malus domestica HOM05D000654 ORTHO05D002711 1.0e-16 91.3 171 36.8
Prupe.6G231800 Prunus persica HOM05D000654 ORTHO05D002711 5.1e-16 89.0 193 46.1
Nn1g04786 Nelumbo nucifera HOM05D000654 ORTHO05D002711 2.5e-15 86.7 207 40.6
Nn5g30356 Nelumbo nucifera HOM05D000654 ORTHO05D002711 2.5e-15 86.7 222 33.3
Potri.005G140300 Populus trichocarpa HOM05D000654 ORTHO05D002711 1.6e-14 84.0 173 35.8
Actinidia16473 Actinidia chinensis HOM05D000654 ORTHO05D002711 2.4e-13 80.1 190 34.2
CSS0004077 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002711 3.1e-13 79.7 181 35.4
MELO3C020850.2 Cucumis melo HOM05D000654 ORTHO05D002711 1.2e-12 77.8 193 32.1
Sed0010870 Sechium edule HOM05D000654 ORTHO05D002711 1.2e-12 77.8 192 32.8
ClCG02G012260 Citrullus lanatus HOM05D000654 ORTHO05D002711 1.5e-12 77.4 193 32.6
CSS0019799 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002711 2.0e-12 77.0 190 41.1
CsaV3_2G016410 Cucumis sativus L. HOM05D000654 ORTHO05D002711 2.6e-12 76.6 193 32.6
Duzib147G1504 Durio zibethinus HOM05D000654 ORTHO05D002711 7.7e-12 75.1 183 44.3
Sed0020043 Sechium edule HOM05D000654 ORTHO05D002711 1.0e-11 74.7 193 33.2
Lj4g0027816 Lotus japonicus HOM05D000654 ORTHO05D002711 1.3e-11 74.3 192 32.8
Potri.007G046100 Populus trichocarpa HOM05D000654 ORTHO05D002711 1.7e-11 73.9 167 35.3
Sabra07G0041200 Salix brachista HOM05D000654 ORTHO05D002711 3.8e-11 72.8 170 35.3
Rhsim08G0099300 Rhododendron simsii HOM05D000654 ORTHO05D002711 1.1e-10 71.2 188 33.5
Dinv15735 Davidia involucrata HOM05D000654 ORTHO05D002711 2.5e-10 70.1 172 32.0
Ca_22150_v3 Cicer arietinum L. HOM05D000654 ORTHO05D002711 3.2e-10 69.7 110 48.2
Ciclev10024767m.g Citrus clementina HOM05D000654 ORTHO05D002711 3.2e-10 69.7 189 39.2
Duzib132G0921 Durio zibethinus HOM05D000654 ORTHO05D002711 7.2e-10 68.6 192 45.3
Atru.chr5.2642 Acer truncatum HOM05D000654 ORTHO05D002711 9.4e-10 68.2 168 47.6
Atru.chr5.2648 Acer truncatum HOM05D000654 ORTHO05D002711 9.4e-10 68.2 168 47.6
Thecc.01G060100 Theobroma cacao HOM05D000654 ORTHO05D002711 9.4e-10 68.2 99 46.5
Gohir.A11G195200 Gossypium hirsutum HOM05D000654 ORTHO05D002711 2.1e-09 67.0 99 45.5
Eucgr.H02071 Eucalyptus grandis HOM05D000654 ORTHO05D002711 2.7e-09 66.6 195 29.7
Gorai.007G215800 Gossypium raimondii HOM05D000654 ORTHO05D002711 2.7e-09 66.6 99 45.5
Atru.chr3.292 Acer truncatum HOM05D000654 ORTHO05D002711 3.6e-09 66.2 182 34.1
arahy.Tifrunner.gnm1.ann1.5Z1D6W Arachis hypogaea HOM05D000654 ORTHO05D002711 3.6e-09 66.2 191 28.8
arahy.Tifrunner.gnm1.ann1.RQMB8Y Arachis hypogaea HOM05D000654 ORTHO05D002711 3.6e-09 66.2 191 28.8
CANSAT25G0706 Cannabis sativa HOM05D000654 ORTHO05D002711 3.6e-09 66.2 173 48.6
Gohir.D11G201400 Gossypium hirsutum HOM05D000654 ORTHO05D002711 4.6e-09 65.9 99 44.4
PSO675G1061 Papaver somniferum HOM05D000654 ORTHO05D002711 4.6e-09 65.9 179 30.7
COL.COLO4_32628 Corchorus olitorius HOM05D000654 ORTHO05D002711 6.1e-09 65.5 182 44.5
Dinv42171 Davidia involucrata HOM05D000654 ORTHO05D002711 7.9e-09 65.1 193 41.5
Lalb_Chr05g0226431 Lupinus albus HOM05D000654 ORTHO05D002711 1.0e-08 64.7 179 30.2
Aqoxy6G01261 Aquilegia oxysepala HOM05D000654 ORTHO05D002711 1.4e-08 64.3 223 27.8
Eucgr.H01691 Eucalyptus grandis HOM05D000654 ORTHO05D002711 2.3e-08 63.5 195 29.2
Gohir.A03G187900 Gossypium hirsutum HOM05D000654 ORTHO05D002711 3.9e-08 62.8 182 29.7
CSS0018882 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002711 5.1e-08 62.4 97 45.4
PSO541G0216 Papaver somniferum HOM05D000654 ORTHO05D002711 5.1e-08 62.4 179 30.2
Thecc.02G103700 Theobroma cacao HOM05D000654 ORTHO05D002711 5.1e-08 62.4 192 30.2
CiPaw.06G171400 Carya illinoinensis HOM05D000654 ORTHO05D002711 6.7e-08 62.0 193 30.1
vmacro17961 Vaccinium macrocarpon HOM05D000654 ORTHO05D002711 8.8e-08 61.6 192 31.2
Glyma.17G170600 Glycine max HOM05D000654 ORTHO05D002711 2.0e-07 60.5 109 40.4
CANSAT25G1866 Cannabis sativa HOM05D000654 ORTHO05D002711 3.3e-07 59.7 193 39.4
Duzib052G0555 Durio zibethinus HOM05D000654 ORTHO05D002711 3.3e-07 59.7 192 30.7
Gohir.D02G208700 Gossypium hirsutum HOM05D000654 ORTHO05D002711 4.4e-07 59.3 181 31.5
Gorai.005G236700 Gossypium raimondii HOM05D000654 ORTHO05D002711 4.4e-07 59.3 181 31.5
RcHm_v2.0_Chr6g0256631 Rosa chinensis HOM05D000654 ORTHO05D002711 5.7e-07 58.9 122 60.7
ECA238G0758 Erigeron canadensis HOM05D000654 ORTHO05D002711 9.7e-07 58.2 108 37.0
Cc07_g06180 Coffea canephora HOM05D000654 ORTHO05D002711 1.3e-06 57.8 111 37.8
GSVIVG01031711001 Vitis vinifera HOM05D000654 ORTHO05D002711 1.3e-06 57.8 118 33.9
Lj3C823T11 Lonicera japonica HOM05D000654 ORTHO05D002711 1.7e-06 57.4 90 47.8
TWI09G0346 Tripterygium wilfordii HOM05D000654 ORTHO05D002711 1.7e-06 57.4 111 39.6
Cpa.g.sc55.117 Carica papaya HOM05D000654 ORTHO05D002711 2.2e-06 57.0 195 28.7
CSS0003390 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002711 2.8e-06 56.6 123 32.5
CSS0039056 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002711 2.8e-06 56.6 123 32.5
Ca_18710_v3 Cicer arietinum L. HOM05D000654 ORTHO05D002711 4.8e-06 55.8 176 28.4
COL.COLO4_24562 Corchorus olitorius HOM05D000654 ORTHO05D002711 6.3e-06 55.5 104 38.5


User provided reference genes

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