Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 0.0e+00 2020.0 1039 100.0
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.1e-15 90.1 265 28.3
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.8e-15 89.4 269 29.0
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 4.1e-15 88.2 274 29.2
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 5.3e-15 87.8 269 28.6
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 5.3e-15 87.8 272 30.9
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 1.2e-14 86.7 273 28.9
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 1.5e-14 86.3 268 28.7
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 2.0e-14 85.9 272 28.7
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 2.0e-14 85.9 269 29.0
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 2.6e-14 85.5 269 28.6
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 3.4e-14 85.1 273 28.6
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 3.4e-14 85.1 274 28.5
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 5.9e-14 84.3 275 28.0
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 5.9e-14 84.3 273 28.9
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 5.9e-14 84.3 269 29.4
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 5.9e-14 84.3 275 28.7
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 5.9e-14 84.3 275 28.0
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 5.9e-14 84.3 275 28.0
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 5.9e-14 84.3 269 29.4
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 7.6e-14 84.0 269 30.1
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 7.6e-14 84.0 269 29.0
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 1.0e-13 83.6 281 27.8
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 1.0e-13 83.6 269 29.4
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 1.0e-13 83.6 269 29.0
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 1.0e-13 83.6 274 27.7
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 1.0e-13 83.6 285 27.7
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.0e-13 83.6 266 27.8
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 1.0e-13 83.6 273 28.2
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.0e-13 83.6 269 27.9
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.3e-13 83.2 273 28.6
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 1.3e-13 83.2 274 27.7
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.3e-13 83.2 275 27.6
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 1.7e-13 82.8 275 27.6
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 1.7e-13 82.8 274 28.1
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 1.7e-13 82.8 273 28.9
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 2.2e-13 82.4 271 26.9
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 2.2e-13 82.4 271 28.0
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.2e-13 82.4 269 29.4
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 2.2e-13 82.4 275 27.6
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 2.2e-13 82.4 275 27.6
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 2.9e-13 82.0 265 27.2
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 2.9e-13 82.0 146 36.3
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 2.9e-13 82.0 275 28.0
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 2.9e-13 82.0 275 29.1
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 3.8e-13 81.6 272 27.2
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 3.8e-13 81.6 276 27.2
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 3.8e-13 81.6 275 27.6
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 3.8e-13 81.6 272 27.2
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 5.0e-13 81.3 276 26.8
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 5.0e-13 81.3 276 26.8
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 5.0e-13 81.3 277 27.8
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 5.0e-13 81.3 274 27.4
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 6.5e-13 80.9 273 27.8
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 6.5e-13 80.9 276 28.3
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 6.5e-13 80.9 272 26.5
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 6.5e-13 80.9 273 28.9
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 6.5e-13 80.9 273 28.9
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 6.5e-13 80.9 274 27.4
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 8.5e-13 80.5 269 29.0
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 8.5e-13 80.5 274 27.4
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 1.1e-12 80.1 276 28.6
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 1.1e-12 80.1 276 27.5
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 1.1e-12 80.1 271 27.3
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.1e-12 80.1 269 29.0
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 1.1e-12 80.1 274 27.4
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 1.1e-12 80.1 279 26.5
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 1.1e-12 80.1 268 28.4
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.1e-12 80.1 280 26.1
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 1.1e-12 80.1 274 27.4
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.4e-12 79.7 269 29.4
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 1.4e-12 79.7 275 27.3
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 1.4e-12 79.7 273 28.6
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.4e-12 79.7 281 27.0
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 1.9e-12 79.3 269 28.3
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 1.9e-12 79.3 159 32.1
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 1.9e-12 79.3 273 27.5
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.9e-12 79.3 280 26.1
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.9e-12 79.3 289 28.4
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 2.5e-12 79.0 276 28.3
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 2.5e-12 79.0 272 26.8
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 2.5e-12 79.0 282 29.8
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 2.5e-12 79.0 268 28.0
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 3.2e-12 78.6 276 27.2
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 3.2e-12 78.6 276 27.2
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 3.2e-12 78.6 276 27.2
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 3.2e-12 78.6 278 28.1
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 4.2e-12 78.2 274 27.0
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 4.2e-12 78.2 269 27.5
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 4.2e-12 78.2 276 26.8
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 5.5e-12 77.8 269 27.9
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 5.5e-12 77.8 146 34.9
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 5.5e-12 77.8 265 27.5
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 7.2e-12 77.4 276 26.8
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 7.2e-12 77.4 269 27.9
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 9.4e-12 77.0 271 26.9
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 9.4e-12 77.0 279 26.5
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.2e-11 76.6 279 28.3
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 1.6e-11 76.3 274 27.4
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 2.1e-11 75.9 161 33.5
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 2.1e-11 75.9 269 26.8
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 4.6e-11 74.7 275 26.2
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 6.1e-11 74.3 146 32.9
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 6.1e-11 74.3 244 28.3
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 6.1e-11 74.3 243 27.2
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 7.9e-11 73.9 269 26.8
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 1.0e-10 73.6 273 27.1
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.0e-10 73.6 263 27.0
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.0e-10 73.6 268 26.5
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 3.0e-10 72.0 273 26.4
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 3.0e-10 72.0 294 26.5
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 3.0e-10 72.0 243 27.6
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 3.0e-10 72.0 268 26.5
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 6.7e-10 70.9 352 24.4
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 4.3e-09 68.2 284 26.1
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 2.0e-06 59.3 224 26.8


User provided reference genes

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