Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026987 Carpinus fangiana HOM05D004665 ORTHO05D123409 2.8e-289 998.0 553 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2741 Anthoceros agrestis HOM05D004665 ORTHO05D006264 1.6e-10 72.0 309 22.0
Oeu050153.1 Olea europaea HOM05D004665 ORTHO05D006264 1.4e-09 68.9 317 24.6
Prupe.1G163100 Prunus persica HOM05D000755 ORTHO05D000642 3.9e-09 67.4 257 23.0
Lj6g0021518 Lotus japonicus HOM05D000755 ORTHO05D000642 5.2e-09 67.0 257 24.1
PGSC0003DMG400009230 Solanum tuberosum HOM05D000755 ORTHO05D000642 5.2e-09 67.0 280 23.9
CsaV3_5G029850 Cucumis sativus L. HOM05D000755 ORTHO05D000642 6.7e-09 66.6 257 24.9
Mapoly0166s0011 Marchantia polymorpha HOM05D004665 ORTHO05D006264 6.7e-09 66.6 291 23.7
MELO3C011827.2 Cucumis melo HOM05D000755 ORTHO05D000642 1.1e-08 65.9 257 24.9
Glyma.05G153000 Glycine max HOM05D000755 ORTHO05D000642 1.1e-08 65.9 257 22.2
Psat5g100520 Pisum sativum HOM05D000755 ORTHO05D000642 2.0e-08 65.1 305 23.3
Aqoxy2G04006 Aquilegia oxysepala HOM05D000755 ORTHO05D000642 2.6e-08 64.7 257 21.4
Glyma.06G159100 Glycine max HOM05D000755 ORTHO05D000642 3.3e-08 64.3 279 21.9
Solyc11g016940.2 Solanum lycopersicum HOM05D000755 ORTHO05D000642 3.3e-08 64.3 285 23.5
BcaC06g35585 Brassica carinata HOM05D000755 ORTHO05D000642 5.7e-08 63.5 257 23.0
A07p08500 Brassica napus HOM05D000755 ORTHO05D000642 5.7e-08 63.5 257 23.0
C07p13240 Brassica napus HOM05D000755 ORTHO05D000642 5.7e-08 63.5 257 23.0
BolC7t41816H Brassica oleracea HOM05D000755 ORTHO05D000642 5.7e-08 63.5 257 23.0
BraA07t28635Z Brassica rapa HOM05D000755 ORTHO05D000642 5.7e-08 63.5 257 23.0
BcaB06g26552 Brassica carinata HOM05D000755 ORTHO05D000642 7.4e-08 63.2 257 23.0
CARHR099870 Cardamine hirsuta HOM05D000755 ORTHO05D000642 7.4e-08 63.2 257 23.7
MD04G1016400 Malus domestica HOM05D000755 ORTHO05D000642 7.4e-08 63.2 257 23.0
Rhsim08G0037600 Rhododendron simsii HOM05D004665 ORTHO05D006264 7.4e-08 63.2 283 23.3
GSVIVG01022398001 Vitis vinifera HOM05D000755 ORTHO05D000642 7.4e-08 63.2 279 22.9
Lalb_Chr08g0237851 Lupinus albus HOM05D000755 ORTHO05D000642 9.7e-08 62.8 279 22.6
Medtr8g081650 Medicago truncatula HOM05D000755 ORTHO05D000642 1.7e-07 62.0 257 22.6
AL3G38840 Arabidopsis lyrata HOM05D000755 ORTHO05D000642 2.2e-07 61.6 257 22.2
MBI11_g30566_MAGBIO Magnolia biondii HOM05D004665 ORTHO05D006264 2.2e-07 61.6 275 22.9
Pp3c3_36320 Physcomitrium patens HOM05D004665 ORTHO05D006264 2.2e-07 61.6 318 21.7
QL02p099997 Quercus lobata HOM05D000755 ORTHO05D000642 2.2e-07 61.6 257 23.0
Aqoxy5G03000 Aquilegia oxysepala HOM05D004665 ORTHO05D006264 2.8e-07 61.2 313 22.7
AT3G23870 Arabidopsis thaliana HOM05D000755 ORTHO05D000642 2.8e-07 61.2 257 22.2
Hund19001 Selenicereus undatus HOM05D000755 ORTHO05D000642 2.8e-07 61.2 247 24.3
Carub.0003s2417 Capsella rubella HOM05D000755 ORTHO05D000642 4.8e-07 60.5 257 22.6
Sed0021653 Sechium edule HOM05D000755 ORTHO05D000642 8.2e-07 59.7 257 22.2
ClCG05G009420 Citrullus lanatus HOM05D000755 ORTHO05D000642 1.1e-06 59.3 257 22.6
VMungo1383G0688 Vigna mungo HOM05D000755 ORTHO05D000642 1.1e-06 59.3 257 21.8
FvH4_5g28690 Fragaria vesca HOM05D000755 ORTHO05D000642 1.4e-06 58.9 257 23.3
FAN08G2270 Fragaria x ananassa HOM05D000755 ORTHO05D000642 1.4e-06 58.9 257 23.3
FAN13G2970 Fragaria x ananassa HOM05D000755 ORTHO05D000642 1.4e-06 58.9 257 23.3
PGR142G0146 Punica granatum HOM05D000755 ORTHO05D000642 1.4e-06 58.9 257 23.3
Sed0008550 Sechium edule HOM05D000755 ORTHO05D000642 1.4e-06 58.9 257 23.7
Sed0016539 Sechium edule HOM05D000755 ORTHO05D000642 1.4e-06 58.9 257 22.2
CsaV3_3G019310 Cucumis sativus L. HOM05D000755 ORTHO05D000642 1.8e-06 58.5 257 21.8
FAN18G1477 Fragaria x ananassa HOM05D000755 ORTHO05D000642 1.8e-06 58.5 257 23.3
MD15G1432900 Malus domestica HOM05D000755 ORTHO05D000642 1.8e-06 58.5 257 23.0
PGSC0003DMG400026431 Solanum tuberosum HOM05D000755 ORTHO05D000642 1.8e-06 58.5 258 23.6
ATR0582G225 Amborella trichopoda HOM05D004665 ORTHO05D006264 2.4e-06 58.2 232 25.0
MD08G1240300 Malus domestica HOM05D000755 ORTHO05D000642 2.4e-06 58.2 257 23.0
Pp3c8_3640 Physcomitrium patens HOM05D004665 ORTHO05D006264 2.4e-06 58.2 320 20.9
Prupe.1G576800 Prunus persica HOM05D000755 ORTHO05D000642 2.4e-06 58.2 257 23.0
CBR_g40440 Chara braunii HOM05D004665 ORTHO05D006264 3.1e-06 57.8 240 22.5
RcHm_v2.0_Chr7g0220851 Rosa chinensis HOM05D000755 ORTHO05D000642 3.1e-06 57.8 257 23.3
HPP92_021581 Vanilla planifolia HOM05D004665 ORTHO05D006264 3.1e-06 57.8 312 21.5
Hund06408 Selenicereus undatus HOM05D000755 ORTHO05D000642 4.1e-06 57.4 259 22.0
CiPaw.05G051600 Carya illinoinensis HOM05D000755 ORTHO05D000642 5.3e-06 57.0 257 23.0
Hma1.2p1_0421F.1_g149890 Hydrangea macrophylla HOM05D004665 ORTHO05D006264 5.3e-06 57.0 283 22.6
Ciclev10001691m.g Citrus clementina HOM05D000755 ORTHO05D000642 7.0e-06 56.6 257 23.0
Lsat_1_v5_gn_9_120840 Lactuca sativa HOM05D000755 ORTHO05D000642 7.0e-06 56.6 257 23.3
Phvul.001G267300 Phaseolus vulgaris HOM05D000755 ORTHO05D000642 7.0e-06 56.6 259 22.4
Zm00001eb145690 Zea mays HOM05D000755 ORTHO05D000642 7.0e-06 56.6 257 23.7
Nn1g08006 Nelumbo nucifera HOM05D000755 ORTHO05D000642 9.1e-06 56.2 257 21.4
Os05g0424800 Oryza sativa ssp. japonica HOM05D000755 ORTHO05D000642 9.1e-06 56.2 257 24.1
PSO170G3129 Papaver somniferum HOM05D000755 ORTHO05D000642 9.1e-06 56.2 257 23.0
PSO782G1261 Papaver somniferum HOM05D000755 ORTHO05D000642 9.1e-06 56.2 257 23.0


User provided reference genes

Program Settings