Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026945 Carpinus fangiana HOM05D003213 ORTHO05D121657 4.0e-139 498.0 247 100.0
Hund18853 Selenicereus undatus HOM05D003213 ORTHO05D003693 2.5e-11 73.6 139 30.9
Hund04873 Selenicereus undatus HOM05D003213 ORTHO05D003693 4.6e-10 69.3 177 29.9
BolC1t01297H Brassica oleracea HOM05D003213 ORTHO05D003693 1.3e-09 67.8 176 27.3
AT4G20330 Arabidopsis thaliana HOM05D003213 ORTHO05D003693 1.8e-09 67.4 246 24.8
ATR0706G062 Amborella trichopoda HOM05D003213 ORTHO05D003693 2.3e-09 67.0 168 29.8
BcaC09g51426 Brassica carinata HOM05D003213 ORTHO05D003693 2.3e-09 67.0 176 27.3
BcaNung01799 Brassica carinata HOM05D003213 ORTHO05D003693 2.3e-09 67.0 176 27.8
A01p11190 Brassica napus HOM05D003213 ORTHO05D003693 5.1e-09 65.9 176 27.3
C01p13230 Brassica napus HOM05D003213 ORTHO05D003693 5.1e-09 65.9 176 26.7
CARHR227160 Cardamine hirsuta HOM05D003213 ORTHO05D003693 6.7e-09 65.5 183 28.4
AL7G33560 Arabidopsis lyrata HOM05D003213 ORTHO05D003693 1.5e-08 64.3 175 26.9
MBI13_g09223_MAGBIO Magnolia biondii HOM05D003213 ORTHO05D003693 1.5e-08 64.3 184 27.7
Ah.02g112600 Amaranthus hybridus HOM05D003213 ORTHO05D003693 3.3e-08 63.2 168 26.8
Thhalv10025896m.g Eutrema salsugineum HOM05D003213 ORTHO05D003693 3.3e-08 63.2 171 26.3
Cfa020619 Carpinus fangiana HOM05D003213 ORTHO05D003693 4.3e-08 62.8 177 28.8
AUR62001667 Chenopodium quinoa HOM05D003213 ORTHO05D003693 5.7e-08 62.4 168 26.2
Lsat_1_v5_gn_7_82800 Lactuca sativa HOM05D003213 ORTHO05D003693 5.7e-08 62.4 174 28.7
AUR62020113 Chenopodium quinoa HOM05D003213 ORTHO05D003693 1.3e-07 61.2 168 26.2
Hma1.2p1_0514F.1_g169810 Hydrangea macrophylla HOM05D003213 ORTHO05D003693 1.3e-07 61.2 177 28.2
Lalb_Chr09g0325531 Lupinus albus HOM05D003213 ORTHO05D003693 1.3e-07 61.2 169 27.2
Sabra01G0081400 Salix brachista HOM05D003213 ORTHO05D003693 1.3e-07 61.2 235 25.5
Sp7g18680 Schrenkiella parvula HOM05D003213 ORTHO05D003693 1.3e-07 61.2 215 24.2
Carub.0007s2043 Capsella rubella HOM05D003213 ORTHO05D003693 1.6e-07 60.8 179 27.9
HanXRQChr01g0003921 Helianthus annuus HOM05D003213 ORTHO05D003693 1.6e-07 60.8 173 25.4
Lalb_Chr16g0377171 Lupinus albus HOM05D003213 ORTHO05D003693 1.6e-07 60.8 169 27.2
MD06G1076900 Malus domestica HOM05D003213 ORTHO05D003693 1.6e-07 60.8 178 28.1
TWI36G0215 Tripterygium wilfordii HOM05D003213 ORTHO05D003693 1.6e-07 60.8 243 25.9
HPP92_025983 Vanilla planifolia HOM05D003213 ORTHO05D003693 1.6e-07 60.8 174 27.6
AagrBONN_evm.TU.Sc2ySwM_344.156 Anthoceros agrestis HOM05D003213 ORTHO05D003693 2.2e-07 60.5 130 28.5
CARHR255490 Cardamine hirsuta HOM05D003213 ORTHO05D003693 2.8e-07 60.1 177 26.0
Nn8g38712 Nelumbo nucifera HOM05D003213 ORTHO05D003693 2.8e-07 60.1 179 26.3
Phvul.002G287100 Phaseolus vulgaris HOM05D003213 ORTHO05D003693 2.8e-07 60.1 168 28.0
CSS0033515 Camellia sinensis var. sinensis HOM05D003213 ORTHO05D003693 3.7e-07 59.7 185 27.6
CiPaw.10G013100 Carya illinoinensis HOM05D003213 ORTHO05D003693 3.7e-07 59.7 179 26.8
Potri.001G107500 Populus trichocarpa HOM05D003213 ORTHO05D003693 3.7e-07 59.7 257 24.5
AUR62029439 Chenopodium quinoa HOM05D003213 ORTHO05D003693 6.3e-07 58.9 128 28.1
Cc08_g14280 Coffea canephora HOM05D003213 ORTHO05D003693 6.3e-07 58.9 177 25.4
Phvul.002G155700 Phaseolus vulgaris HOM05D003213 ORTHO05D003693 6.3e-07 58.9 167 26.3
Aa31LG9G11070 Aethionema arabicum HOM05D003213 ORTHO05D003693 8.2e-07 58.5 155 28.4
AagrBONN_evm.TU.Sc2ySwM_228.4384 Anthoceros agrestis HOM05D003213 ORTHO05D003693 8.2e-07 58.5 221 26.7
MSTRG.24318 Avicennia marina HOM05D003213 ORTHO05D003693 8.2e-07 58.5 168 28.6
CAN.G100.2 Capsicum annuum HOM05D003213 ORTHO05D003693 8.2e-07 58.5 174 27.0
Os10g0397200 Oryza sativa ssp. japonica HOM05D003213 ORTHO05D003693 8.2e-07 58.5 168 27.4
CAN.G308.26 Capsicum annuum HOM05D003213 ORTHO05D003693 1.1e-06 58.2 174 27.0
SalBow5G2014 Salvia bowleyana HOM05D003213 ORTHO05D003693 1.1e-06 58.2 174 27.0
CANSAT25G0208 Cannabis sativa HOM05D003213 ORTHO05D003693 1.4e-06 57.8 168 27.4
CANSAT80G2251 Cannabis sativa HOM05D003213 ORTHO05D003693 1.4e-06 57.8 168 27.4
Dinv37666 Davidia involucrata HOM05D003213 ORTHO05D003693 1.4e-06 57.8 177 27.1
VMungo0251G2562 Vigna mungo HOM05D003213 ORTHO05D003693 1.4e-06 57.8 168 27.4
Lj2g0020834 Lotus japonicus HOM05D003213 ORTHO05D003693 1.8e-06 57.4 168 28.0
Sc07g0009620 Simmondsia chinensis HOM05D003213 ORTHO05D003693 1.8e-06 57.4 150 27.3
Glyma.11G025300 Glycine max HOM05D003213 ORTHO05D003693 2.4e-06 57.0 168 27.4
Atru.chr12.1280 Acer truncatum HOM05D003213 ORTHO05D003693 3.1e-06 56.6 177 27.7
Atru.chr12.1289 Acer truncatum HOM05D003213 ORTHO05D003693 3.1e-06 56.6 177 27.7
Glyma.01G217900 Glycine max HOM05D003213 ORTHO05D003693 3.1e-06 56.6 168 27.4
TPR.G6680 Trifolium pratense HOM05D003213 ORTHO05D003693 3.1e-06 56.6 168 27.4
DCAR_000683 Daucus carota HOM05D003213 ORTHO05D003693 4.1e-06 56.2 157 26.8
Lsat_1_v5_gn_7_16741 Lactuca sativa HOM05D003213 ORTHO05D003693 4.1e-06 56.2 187 29.4
Medtr8g096950 Medicago truncatula HOM05D003213 ORTHO05D003693 4.1e-06 56.2 169 24.9
SalBow5G2552 Salvia bowleyana HOM05D003213 ORTHO05D003693 4.1e-06 56.2 174 26.4
Psat7g035800 Pisum sativum HOM05D003213 ORTHO05D003693 5.3e-06 55.8 168 26.2
SalBow6G3200 Salvia bowleyana HOM05D003213 ORTHO05D003693 5.3e-06 55.8 174 26.4
TAR629G0228 Trochodendron aralioides HOM05D003213 ORTHO05D003693 5.3e-06 55.8 177 27.7
DCAR_006753 Daucus carota HOM05D003213 ORTHO05D003693 6.9e-06 55.5 157 26.8
QL12p017921 Quercus lobata HOM05D003213 ORTHO05D003693 6.9e-06 55.5 177 26.6
arahy.Tifrunner.gnm1.ann1.4S7XPI Arachis hypogaea HOM05D003213 ORTHO05D003693 9.0e-06 55.1 177 27.7
arahy.Tifrunner.gnm1.ann1.91GX53 Arachis hypogaea HOM05D003213 ORTHO05D003693 9.0e-06 55.1 177 27.7
CSS0024384 Camellia sinensis var. sinensis HOM05D003213 ORTHO05D003693 9.0e-06 55.1 185 25.9


User provided reference genes

Program Settings