Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026928 Carpinus fangiana HOM05D004776 ORTHO05D005777 0.0e+00 1681.8 860 100.0
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 4.8e-22 110.9 254 33.1
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 4.8e-22 110.9 254 33.1
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 4.8e-22 110.9 254 33.1
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 6.3e-22 110.5 252 31.3
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 8.3e-22 110.2 258 30.2
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 8.3e-22 110.2 254 32.7
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 8.3e-22 110.2 258 30.2
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 1.4e-21 109.4 258 29.8
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 1.8e-21 109.0 258 29.8
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 1.8e-21 109.0 183 36.1
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 2.4e-21 108.6 258 30.2
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 3.1e-21 108.2 258 30.6
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 3.1e-21 108.2 258 30.6
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 5.3e-21 107.5 258 29.8
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 7.0e-21 107.1 258 29.8
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 7.0e-21 107.1 258 29.8
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 7.0e-21 107.1 258 29.8
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 7.0e-21 107.1 258 29.8
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 7.0e-21 107.1 258 29.8
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 7.0e-21 107.1 258 30.2
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 9.1e-21 106.7 252 31.3
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 9.1e-21 106.7 252 31.3
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 1.2e-20 106.3 254 31.5
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 1.2e-20 106.3 254 31.5
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 1.2e-20 106.3 254 31.5
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 2.0e-20 105.5 258 30.2
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 2.0e-20 105.5 258 30.2
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 2.0e-20 105.5 258 30.2
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 2.0e-20 105.5 188 33.5
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 2.0e-20 105.5 252 30.2
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 2.7e-20 105.1 252 31.0
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 2.7e-20 105.1 210 32.4
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 2.7e-20 105.1 255 32.2
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 2.7e-20 105.1 252 31.3
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 3.5e-20 104.8 254 32.3
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 5.9e-20 104.0 254 31.9
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 7.7e-20 103.6 254 29.9
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 7.7e-20 103.6 254 29.9
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.0e-19 103.2 258 29.1
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 1.3e-19 102.8 258 31.0
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 1.3e-19 102.8 258 30.2
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 1.7e-19 102.4 255 29.4
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 1.7e-19 102.4 254 31.5
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 1.7e-19 102.4 207 30.9
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 2.2e-19 102.1 258 29.1
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.2e-19 102.1 255 28.2
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.2e-19 102.1 258 29.1
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 2.2e-19 102.1 255 30.6
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 2.9e-19 101.7 254 29.5
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 2.9e-19 101.7 255 28.2
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 2.9e-19 101.7 254 31.1
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 2.9e-19 101.7 256 29.7
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.9e-19 101.7 258 29.1
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 2.9e-19 101.7 258 29.5
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 2.9e-19 101.7 188 34.6
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 3.8e-19 101.3 254 31.9
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 5.0e-19 100.9 252 30.6
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 5.0e-19 100.9 252 29.0
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 5.0e-19 100.9 252 29.8
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 5.0e-19 100.9 252 31.0
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 5.0e-19 100.9 252 31.0
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 5.0e-19 100.9 252 31.0
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 6.5e-19 100.5 252 29.0
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 6.5e-19 100.5 254 29.9
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 6.5e-19 100.5 252 30.6
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 6.5e-19 100.5 252 29.4
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 6.5e-19 100.5 210 31.9
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 8.5e-19 100.1 210 32.4
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 1.1e-18 99.8 204 30.9
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 1.1e-18 99.8 188 33.5
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 1.1e-18 99.8 258 29.1
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 1.1e-18 99.8 253 33.2
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 1.1e-18 99.8 210 31.9
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.5e-18 99.4 210 32.4
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 1.5e-18 99.4 258 29.5
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 1.5e-18 99.4 210 31.0
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 1.5e-18 99.4 198 33.8
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 1.9e-18 99.0 252 30.6
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 1.9e-18 99.0 255 28.6
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 1.9e-18 99.0 210 30.5
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 1.9e-18 99.0 254 29.5
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 2.5e-18 98.6 255 29.8
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 2.5e-18 98.6 258 29.1
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 2.5e-18 98.6 254 28.7
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 2.5e-18 98.6 254 31.1
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 2.5e-18 98.6 254 28.7
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 3.2e-18 98.2 254 29.1
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 3.2e-18 98.2 254 28.7
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 3.2e-18 98.2 256 30.5
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 4.2e-18 97.8 255 27.8
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 5.5e-18 97.4 252 30.2
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 7.2e-18 97.1 210 31.0
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 7.2e-18 97.1 210 31.9
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 9.4e-18 96.7 258 28.3
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 1.2e-17 96.3 188 32.4
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 1.2e-17 96.3 210 30.5
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 1.6e-17 95.9 183 34.4
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 1.6e-17 95.9 254 31.1
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 2.1e-17 95.5 186 32.3
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 2.7e-17 95.1 210 30.0
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 3.6e-17 94.7 256 29.3
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 3.6e-17 94.7 210 32.4
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 6.1e-17 94.0 190 33.7
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 1.0e-16 93.2 262 28.6
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 2.3e-16 92.0 252 28.6
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 2.3e-16 92.0 214 31.3
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 4.0e-16 91.3 248 29.0
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 6.8e-16 90.5 188 30.9
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 1.5e-15 89.4 174 32.8
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 2.2e-14 85.5 210 30.5
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 2.2e-14 85.5 272 26.8
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 4.8e-14 84.3 216 28.7
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 1.8e-13 82.4 162 30.2
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 2.4e-13 82.0 287 30.0
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 3.1e-13 81.6 210 29.5
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 2.0e-12 79.0 172 33.7
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 7.7e-12 77.0 163 32.5
Cre06.g277700 Chlamydomonas reinhardtii HOM05D004776 ORTHO05D005777 2.9e-11 75.1 257 29.6
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 2.9e-11 75.1 155 34.8
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 5.0e-11 74.3 239 25.9
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 1.9e-10 72.4 232 27.2
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-09 69.7 198 26.3
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 8.0e-09 67.0 186 28.0
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.0e-08 66.6 210 26.2
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 1.8e-08 65.9 122 30.3
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 4.0e-08 64.7 204 27.9
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 2.0e-07 62.4 194 25.3
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 7.5e-07 60.5 149 26.8
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 3.7e-06 58.2 219 26.0
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 8.3e-06 57.0 148 27.7


User provided reference genes

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