Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.9e-201 705.7 362 100.0
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 4.2e-20 103.2 357 30.5
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 1.2e-19 101.7 362 29.6
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 8.0e-19 99.0 365 28.8
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.4e-18 98.2 367 29.4
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 1.8e-18 97.8 358 30.4
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 3.0e-18 97.1 367 28.3
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 4.0e-18 96.7 365 28.5
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 5.2e-18 96.3 365 30.1
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 5.2e-18 96.3 367 28.6
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 5.2e-18 96.3 367 28.9
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 6.8e-18 95.9 365 29.9
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 8.9e-18 95.5 360 28.6
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 8.9e-18 95.5 357 27.5
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.2e-17 95.1 366 29.2
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.2e-17 95.1 349 28.4
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.2e-17 95.1 364 29.4
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 1.2e-17 95.1 344 29.4
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 3.4e-17 93.6 367 28.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 3.4e-17 93.6 364 27.7
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.4e-17 93.2 289 29.8
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 5.7e-17 92.8 348 27.9
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 5.7e-17 92.8 348 27.9
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 5.7e-17 92.8 293 29.7
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 7.5e-17 92.4 365 28.2
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 7.5e-17 92.4 365 27.9
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 7.5e-17 92.4 347 28.2
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 9.8e-17 92.0 350 27.7
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.3e-16 91.7 366 27.3
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-16 91.7 362 28.7
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.3e-16 91.7 364 27.7
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.3e-16 91.7 365 26.8
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 1.7e-16 91.3 365 27.1
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.7e-16 91.3 348 28.2
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 1.7e-16 91.3 365 27.4
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 2.2e-16 90.9 339 27.1
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 2.2e-16 90.9 365 29.3
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 2.2e-16 90.9 365 27.4
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 2.2e-16 90.9 364 27.7
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 2.2e-16 90.9 364 27.7
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 2.8e-16 90.5 291 29.9
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 2.8e-16 90.5 365 27.7
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 3.7e-16 90.1 354 28.2
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 4.9e-16 89.7 367 28.9
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 4.9e-16 89.7 365 27.4
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.9e-16 89.7 348 27.9
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 4.9e-16 89.7 352 25.3
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 4.9e-16 89.7 364 26.9
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 4.9e-16 89.7 352 26.1
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 6.3e-16 89.4 365 26.8
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 6.3e-16 89.4 366 29.0
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 6.3e-16 89.4 365 28.2
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 6.3e-16 89.4 365 28.5
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 6.3e-16 89.4 293 28.0
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 8.3e-16 89.0 358 27.4
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 8.3e-16 89.0 350 27.4
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 8.3e-16 89.0 348 27.6
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 8.3e-16 89.0 348 28.4
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.1e-15 88.6 365 28.2
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 1.1e-15 88.6 365 28.2
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 1.4e-15 88.2 272 32.4
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 1.4e-15 88.2 362 26.5
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 1.8e-15 87.8 350 29.4
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.8e-15 87.8 231 32.0
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.8e-15 87.8 362 27.3
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 2.4e-15 87.4 366 26.8
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 2.4e-15 87.4 338 28.1
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 2.4e-15 87.4 366 26.8
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 4.1e-15 86.7 367 27.2
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 4.1e-15 86.7 233 30.9
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 4.1e-15 86.7 233 30.9
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 4.1e-15 86.7 363 27.0
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 9.2e-15 85.5 234 32.5
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 9.2e-15 85.5 365 26.8
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 9.2e-15 85.5 365 26.8
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 1.2e-14 85.1 350 26.9
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-14 84.7 361 27.7
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 1.6e-14 84.7 358 26.5
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 2.0e-14 84.3 365 25.5
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 2.0e-14 84.3 367 26.4
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 2.7e-14 84.0 348 27.0
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-14 84.0 358 27.7
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 2.7e-14 84.0 349 27.8
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 3.5e-14 83.6 240 33.3
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 3.5e-14 83.6 348 25.6
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 5.9e-14 82.8 255 31.4
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 5.9e-14 82.8 365 27.1
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 5.9e-14 82.8 348 26.4
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 5.9e-14 82.8 365 27.7
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 5.9e-14 82.8 365 27.4
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.8e-14 82.4 349 27.2
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.8e-14 82.4 349 27.2
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 7.8e-14 82.4 233 30.9
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 7.8e-14 82.4 233 30.9
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 7.8e-14 82.4 233 30.9
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 7.8e-14 82.4 362 27.3
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 7.8e-14 82.4 362 25.7
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 7.8e-14 82.4 351 27.9
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 1.0e-13 82.0 234 31.2
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 1.0e-13 82.0 340 27.9
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.0e-13 82.0 360 26.1
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-13 81.6 358 26.8
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 2.3e-13 80.9 351 29.3
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 2.9e-13 80.5 365 27.1
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 3.8e-13 80.1 233 30.9
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-13 80.1 354 27.1
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 6.6e-13 79.3 366 26.8
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 6.6e-13 79.3 271 28.4
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 8.6e-13 79.0 233 30.5
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 8.6e-13 79.0 233 30.5
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 8.6e-13 79.0 360 26.9
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.1e-12 78.6 349 26.6
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.5e-12 78.2 371 25.6
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 3.3e-12 77.0 371 28.0
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 4.3e-12 76.6 355 25.6
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 4.3e-12 76.6 365 25.5
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 7.3e-12 75.9 117 42.7
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 7.3e-12 75.9 371 26.7
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 9.5e-12 75.5 365 26.3
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 9.5e-12 75.5 243 30.5
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 8.0e-11 72.4 288 28.1
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 8.0e-11 72.4 233 27.5
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 1.4e-10 71.6 248 30.6
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 5.2e-10 69.7 307 28.7
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 5.2e-10 69.7 202 31.7
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 5.2e-10 69.7 293 25.9
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 5.2e-10 69.7 135 41.5
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 5.8e-09 66.2 270 29.6
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 5.8e-09 66.2 238 28.6
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-08 65.1 214 27.6
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 2.2e-08 64.3 211 34.1
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 2.2e-08 64.3 211 27.5
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 6.4e-08 62.8 231 26.8
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.4e-07 61.6 173 29.5
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.9e-07 61.2 208 29.8
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 2.0e-06 57.8 256 26.6
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 2.0e-06 57.8 253 27.7
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 3.5e-06 57.0 99 39.4
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.6e-06 56.6 281 25.6
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 6.0e-06 56.2 171 29.8


User provided reference genes

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