Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 5.4e-198 694.1 350 100.0
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 9.9e-99 364.4 347 56.2
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 7.5e-30 135.6 361 32.1
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.7e-29 134.4 345 32.2
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.2e-29 134.0 356 31.2
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.2e-29 134.0 357 33.1
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 4.8e-29 132.9 356 31.2
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.8e-29 132.9 329 31.3
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.0e-28 129.0 350 30.0
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.0e-28 129.0 350 30.0
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 9.1e-28 128.6 357 30.8
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 2.0e-27 127.5 353 28.9
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 2.7e-27 127.1 350 29.4
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 3.5e-27 126.7 351 29.3
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.5e-27 126.3 351 28.8
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 5.9e-27 125.9 343 29.2
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 5.9e-27 125.9 340 30.9
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 7.7e-27 125.6 344 29.1
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 7.7e-27 125.6 344 29.1
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 7.7e-27 125.6 341 29.9
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 7.7e-27 125.6 341 30.5
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 1.3e-26 124.8 344 28.8
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 1.3e-26 124.8 344 28.8
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 1.3e-26 124.8 341 28.7
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 2.2e-26 124.0 352 29.8
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 2.9e-26 123.6 351 29.3
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 2.9e-26 123.6 345 29.3
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 3.8e-26 123.2 349 29.8
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 5.0e-26 122.9 346 30.9
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 5.0e-26 122.9 351 29.6
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 5.0e-26 122.9 356 30.6
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 5.0e-26 122.9 350 29.1
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 6.5e-26 122.5 344 29.9
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 6.5e-26 122.5 346 28.6
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 8.5e-26 122.1 348 30.7
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 8.5e-26 122.1 346 29.2
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 1.1e-25 121.7 340 29.1
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 1.1e-25 121.7 344 28.5
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 1.1e-25 121.7 344 28.5
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-25 121.7 355 31.3
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.1e-25 121.7 350 30.0
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.5e-25 121.3 357 30.0
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.5e-25 121.3 346 28.6
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.9e-25 120.9 346 30.1
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-25 120.9 358 29.9
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 1.9e-25 120.9 346 28.3
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 2.5e-25 120.6 359 29.0
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 4.2e-25 119.8 344 29.4
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-25 119.4 359 29.5
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 5.5e-25 119.4 352 27.8
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 5.5e-25 119.4 340 30.3
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 7.2e-25 119.0 346 28.9
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 7.2e-25 119.0 354 28.8
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 7.2e-25 119.0 360 30.0
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 7.2e-25 119.0 351 28.8
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 9.4e-25 118.6 346 29.2
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 1.2e-24 118.2 351 27.6
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 1.2e-24 118.2 347 28.5
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 2.1e-24 117.5 346 28.3
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 2.1e-24 117.5 352 29.0
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 2.1e-24 117.5 350 28.3
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 2.1e-24 117.5 357 30.3
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 2.1e-24 117.5 342 28.9
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 2.1e-24 117.5 346 28.9
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 2.7e-24 117.1 347 28.8
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 3.6e-24 116.7 339 28.0
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.7e-24 116.3 345 28.4
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 6.1e-24 115.9 351 28.8
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 6.1e-24 115.9 357 29.4
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.0e-23 115.2 338 29.3
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 1.0e-23 115.2 348 29.9
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 1.4e-23 114.8 346 28.9
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 1.8e-23 114.4 346 27.5
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-23 114.4 348 29.6
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 1.8e-23 114.4 341 28.7
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 1.8e-23 114.4 357 28.9
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.3e-23 114.0 345 29.0
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 2.3e-23 114.0 353 28.3
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 2.3e-23 114.0 346 27.5
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.3e-23 114.0 351 27.9
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 2.3e-23 114.0 346 29.8
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 3.0e-23 113.6 349 29.5
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 4.0e-23 113.2 346 28.3
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.0e-23 113.2 299 30.1
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 4.0e-23 113.2 349 30.1
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 4.0e-23 113.2 347 27.4
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 4.0e-23 113.2 349 28.4
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 5.2e-23 112.8 348 28.2
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 5.2e-23 112.8 358 29.3
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 6.8e-23 112.5 351 27.9
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 6.8e-23 112.5 346 26.9
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 6.8e-23 112.5 349 27.8
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 6.8e-23 112.5 349 27.8
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 8.8e-23 112.1 346 27.2
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 1.2e-22 111.7 341 29.0
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.2e-22 111.7 353 28.0
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.2e-22 111.7 350 28.3
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.0e-22 110.9 357 28.0
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 2.6e-22 110.5 346 28.0
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 2.6e-22 110.5 350 28.0
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 3.4e-22 110.2 343 28.6
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 3.4e-22 110.2 273 31.5
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 4.4e-22 109.8 350 28.0
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 5.7e-22 109.4 358 28.8
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 5.7e-22 109.4 358 28.2
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 5.7e-22 109.4 348 27.6
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 7.5e-22 109.0 346 28.0
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 7.5e-22 109.0 346 27.5
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 7.5e-22 109.0 346 28.3
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 1.7e-21 107.8 339 29.5
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 2.8e-21 107.1 350 27.4
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 3.7e-21 106.7 346 28.3
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 3.7e-21 106.7 284 33.5
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 4.8e-21 106.3 343 28.3
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.8e-21 106.3 359 28.7
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 8.3e-21 105.5 254 30.3
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 1.1e-20 105.1 343 31.8
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 1.4e-20 104.8 251 31.9
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-20 104.8 353 27.5
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 2.4e-20 104.0 350 28.0
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 3.1e-20 103.6 377 26.5
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 9.1e-20 102.1 377 26.5
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 3.5e-19 100.1 310 27.1
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.5e-19 100.1 351 25.6
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 2.9e-18 97.1 238 32.4
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 3.8e-18 96.7 339 28.6
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 5.0e-18 96.3 235 34.5
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 2.5e-17 94.0 227 31.7
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 9.5e-17 92.0 238 31.1
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 1.6e-16 91.3 423 23.6
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 3.6e-16 90.1 338 28.1
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 1.0e-15 88.6 348 25.6
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 4.0e-15 86.7 293 26.3
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 5.7e-14 82.8 281 28.5
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.9e-13 79.7 349 28.1
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 8.3e-13 79.0 358 24.9
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 7.0e-12 75.9 334 25.7
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 4.5e-11 73.2 188 28.7
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.3e-10 71.6 270 29.6
PRCOL_00002754 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 5.0e-10 69.7 143 33.6
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-09 68.6 209 27.3
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 2.1e-08 64.3 236 29.2
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 2.6e-06 57.4 97 36.1
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 5.8e-06 56.2 121 32.2


User provided reference genes

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