Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026666 Carpinus fangiana HOM05D005260 ORTHO05D006390 4.3e-167 591.3 303 100.0
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 2.3e-11 73.9 243 29.6
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 5.1e-11 72.8 272 28.7
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 8.8e-11 72.0 251 26.7
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 1.5e-10 71.2 259 28.6
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 2.0e-10 70.9 203 30.5
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 2.6e-10 70.5 216 28.2
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 4.4e-10 69.7 213 27.2
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 4.4e-10 69.7 246 28.0
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 5.7e-10 69.3 271 28.0
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 5.7e-10 69.3 271 28.0
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 9.7e-10 68.6 278 28.8
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 9.7e-10 68.6 278 27.0
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 9.7e-10 68.6 268 28.4
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 1.3e-09 68.2 218 30.7
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.3e-09 68.2 251 25.9
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 1.3e-09 68.2 214 28.0
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 1.7e-09 67.8 192 29.7
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.2e-09 67.4 281 28.5
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 2.8e-09 67.0 287 26.1
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 2.8e-09 67.0 201 27.9
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 2.8e-09 67.0 247 27.9
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 3.7e-09 66.6 198 29.3
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 4.8e-09 66.2 282 25.9
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 4.8e-09 66.2 251 25.1
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 6.3e-09 65.9 292 25.7
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 8.2e-09 65.5 255 25.5
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 8.2e-09 65.5 290 27.9
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 8.2e-09 65.5 214 27.6
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 1.1e-08 65.1 215 27.0
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 1.1e-08 65.1 264 27.7
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 1.4e-08 64.7 186 28.0
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 1.4e-08 64.7 237 29.1
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 1.4e-08 64.7 279 26.9
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 1.4e-08 64.7 279 28.3
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 1.4e-08 64.7 193 27.5
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 1.8e-08 64.3 281 28.8
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 1.8e-08 64.3 279 28.3
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 1.8e-08 64.3 279 28.3
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 1.8e-08 64.3 279 28.3
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 1.8e-08 64.3 280 26.4
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 1.8e-08 64.3 249 26.9
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 2.4e-08 63.9 198 26.8
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 3.1e-08 63.5 278 28.1
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 3.1e-08 63.5 243 28.8
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 3.1e-08 63.5 269 27.9
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 3.1e-08 63.5 248 27.4
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.1e-08 63.5 243 27.6
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 4.1e-08 63.2 216 27.3
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 4.1e-08 63.2 244 27.0
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 4.1e-08 63.2 279 27.2
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 9.1e-08 62.0 211 28.4
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 9.1e-08 62.0 279 28.0
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 9.1e-08 62.0 281 28.1
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 9.1e-08 62.0 206 26.7
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 9.1e-08 62.0 233 26.2
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.2e-07 61.6 243 27.2
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 1.2e-07 61.6 246 26.0
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 1.2e-07 61.6 267 27.7
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 1.5e-07 61.2 281 28.5
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 1.5e-07 61.2 278 27.7
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 1.5e-07 61.2 280 25.7
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 1.5e-07 61.2 267 25.5
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 1.5e-07 61.2 275 29.1
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 1.5e-07 61.2 258 26.0
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 2.0e-07 60.8 281 28.5
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 2.0e-07 60.8 275 25.1
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 2.0e-07 60.8 256 27.0
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 2.0e-07 60.8 266 26.3
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 2.0e-07 60.8 246 25.2
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 2.6e-07 60.5 240 26.2
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 3.4e-07 60.1 278 27.3
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 3.4e-07 60.1 274 26.3
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 3.4e-07 60.1 275 26.5
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 4.5e-07 59.7 273 26.7
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 4.5e-07 59.7 278 25.2
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 4.5e-07 59.7 243 26.7
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 4.5e-07 59.7 301 27.6
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 5.9e-07 59.3 243 25.9
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 5.9e-07 59.3 292 25.0
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 5.9e-07 59.3 239 27.6
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 7.7e-07 58.9 287 26.5
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 7.7e-07 58.9 225 28.0
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.0e-06 58.5 243 26.3
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 1.3e-06 58.2 278 27.3
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 1.3e-06 58.2 279 27.2
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 1.3e-06 58.2 258 24.8
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 1.7e-06 57.8 276 27.2
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.2e-06 57.4 253 26.5
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 2.9e-06 57.0 278 27.3
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 2.9e-06 57.0 290 26.6
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 3.8e-06 56.6 247 26.7
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 3.8e-06 56.6 218 27.5
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 3.8e-06 56.6 148 31.8
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 3.8e-06 56.6 282 27.0
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 5.0e-06 56.2 242 26.4
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 5.0e-06 56.2 295 27.1
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 5.0e-06 56.2 274 23.7
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 6.5e-06 55.8 271 27.3


User provided reference genes

Program Settings