Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026632 Carpinus fangiana HOM05D005552 ORTHO05D006743 1.0e-309 1065.8 529 100.0
Solyc01g100190.4 Solanum lycopersicum HOM05D005552 ORTHO05D006743 3.1e-27 127.5 387 26.1
Ca_24792_v3 Cicer arietinum L. HOM05D005552 ORTHO05D006743 5.2e-27 126.7 382 28.5
Nn6g32078 Nelumbo nucifera HOM05D005552 ORTHO05D006743 6.8e-27 126.3 384 26.0
Sopen01g043680 Solanum pennellii HOM05D005552 ORTHO05D006743 2.0e-26 124.8 387 26.1
Aa31LG6G13810 Aethionema arabicum HOM05D005552 ORTHO05D006743 3.4e-26 124.0 362 26.2
AT4G37190 Arabidopsis thaliana HOM05D005552 ORTHO05D006743 4.4e-26 123.6 361 26.0
PGSC0003DMG400024733 Solanum tuberosum HOM05D005552 ORTHO05D006743 7.6e-26 122.9 387 25.6
Carub.0007s0338 Capsella rubella HOM05D005552 ORTHO05D006743 1.3e-25 122.1 361 24.9
SMO358G0218 Selaginella moellendorffii HOM05D005552 ORTHO05D006743 1.3e-25 122.1 360 28.9
A03p64710 Brassica napus HOM05D005552 ORTHO05D006743 2.2e-25 121.3 347 25.9
BraA03t15535Z Brassica rapa HOM05D005552 ORTHO05D006743 2.2e-25 121.3 347 25.9
PSO675G7200 Papaver somniferum HOM05D005552 ORTHO05D006743 2.2e-25 121.3 370 23.8
BcaNung04273 Brassica carinata HOM05D005552 ORTHO05D006743 2.9e-25 120.9 348 26.1
Aqoxy6G00889 Aquilegia oxysepala HOM05D005552 ORTHO05D006743 4.9e-25 120.2 371 26.4
AL7G13990 Arabidopsis lyrata HOM05D005552 ORTHO05D006743 4.9e-25 120.2 370 25.1
Pp3c2_14950 Physcomitrium patens HOM05D005552 ORTHO05D006743 6.4e-25 119.8 358 25.7
C07p62120 Brassica napus HOM05D005552 ORTHO05D006743 8.4e-25 119.4 348 25.9
BolC7t46629H Brassica oleracea HOM05D005552 ORTHO05D006743 8.4e-25 119.4 348 25.9
Thhalv10024834m.g Eutrema salsugineum HOM05D005552 ORTHO05D006743 1.1e-24 119.0 363 24.5
Sp7g34600 Schrenkiella parvula HOM05D005552 ORTHO05D006743 1.1e-24 119.0 372 25.3
PSO541G0461 Papaver somniferum HOM05D005552 ORTHO05D006743 1.4e-24 118.6 370 23.5
CARHR245320 Cardamine hirsuta HOM05D005552 ORTHO05D006743 2.4e-24 117.9 370 24.9
Lj4C139G4 Lonicera japonica HOM05D005552 ORTHO05D006743 2.4e-24 117.9 352 26.1
Medtr5g017970 Medicago truncatula HOM05D005552 ORTHO05D006743 2.4e-24 117.9 366 26.5
Prupe.7G138000 Prunus persica HOM05D005552 ORTHO05D006743 7.1e-24 116.3 359 24.5
CAN.G1273.15 Capsicum annuum HOM05D005552 ORTHO05D006743 1.6e-23 115.2 387 24.8
Dinv39890 Davidia involucrata HOM05D005552 ORTHO05D006743 2.1e-23 114.8 384 26.0
Psat2g165040 Pisum sativum HOM05D005552 ORTHO05D006743 2.1e-23 114.8 419 26.7
Mapoly0024s0139 Marchantia polymorpha HOM05D005552 ORTHO05D006743 3.5e-23 114.0 360 28.1
Gohir.A11G189700 Gossypium hirsutum HOM05D005552 ORTHO05D006743 4.6e-23 113.6 379 25.6
Thecc.01G050800 Theobroma cacao HOM05D005552 ORTHO05D006743 4.6e-23 113.6 377 26.8
Cc02_g34610 Coffea canephora HOM05D005552 ORTHO05D006743 6.0e-23 113.2 389 23.7
Oeu020899.1 Olea europaea HOM05D005552 ORTHO05D006743 6.0e-23 113.2 366 25.4
CSS0032711 Camellia sinensis var. sinensis HOM05D005552 ORTHO05D006743 1.0e-22 112.5 390 24.6
Gorai.007G210400 Gossypium raimondii HOM05D005552 ORTHO05D006743 1.0e-22 112.5 367 25.1
RcHm_v2.0_Chr2g0104711 Rosa chinensis HOM05D005552 ORTHO05D006743 1.0e-22 112.5 371 25.6
Actinidia12065 Actinidia chinensis HOM05D005552 ORTHO05D006743 1.3e-22 112.1 378 25.4
Gohir.D11G196500 Gossypium hirsutum HOM05D005552 ORTHO05D006743 1.3e-22 112.1 367 25.1
TAR628G0695 Trochodendron aralioides HOM05D005552 ORTHO05D006743 1.3e-22 112.1 378 24.6
Sed0018600 Sechium edule HOM05D005552 ORTHO05D006743 2.3e-22 111.3 351 25.1
THA.LOC104807572 Tarenaya hassleriana HOM05D005552 ORTHO05D006743 2.3e-22 111.3 459 22.9
Sc16g0001610 Simmondsia chinensis HOM05D005552 ORTHO05D006743 3.0e-22 110.9 342 23.7
TPR.G11337 Trifolium pratense HOM05D005552 ORTHO05D006743 3.0e-22 110.9 360 24.2
MD02G1166800 Malus domestica HOM05D005552 ORTHO05D006743 3.9e-22 110.5 365 25.2
MSTRG.5133 Avicennia marina HOM05D005552 ORTHO05D006743 5.1e-22 110.2 377 24.7
PGR119G0642 Punica granatum HOM05D005552 ORTHO05D006743 6.6e-22 109.8 383 25.1
GSVIVG01003549001 Vitis vinifera HOM05D005552 ORTHO05D006743 8.7e-22 109.4 383 24.3
CiPaw.01G023200 Carya illinoinensis HOM05D005552 ORTHO05D006743 1.1e-21 109.0 382 25.1
COL.COLO4_11363 Corchorus olitorius HOM05D005552 ORTHO05D006743 1.1e-21 109.0 380 25.8
MD15G1279300 Malus domestica HOM05D005552 ORTHO05D006743 1.1e-21 109.0 363 25.1
Atru.chr3.424 Acer truncatum HOM05D005552 ORTHO05D006743 1.9e-21 108.2 261 25.3
Duzib264G1173 Durio zibethinus HOM05D005552 ORTHO05D006743 1.9e-21 108.2 378 26.7
CANSAT64G0631 Cannabis sativa HOM05D005552 ORTHO05D006743 3.3e-21 107.5 383 24.3
Ciclev10025258m.g Citrus clementina HOM05D005552 ORTHO05D006743 3.3e-21 107.5 380 25.5
ECA232G0422 Erigeron canadensis HOM05D005552 ORTHO05D006743 4.3e-21 107.1 356 23.9
Potri.001G361900 Populus trichocarpa HOM05D005552 ORTHO05D006743 4.3e-21 107.1 380 24.5
QL06p042750 Quercus lobata HOM05D005552 ORTHO05D006743 4.3e-21 107.1 382 24.9
Cfa003976 Carpinus fangiana HOM05D005552 ORTHO05D006743 5.6e-21 106.7 351 25.4
Cpa.g.sc6.396 Carica papaya HOM05D005552 ORTHO05D006743 7.3e-21 106.3 385 23.9
AUR62003843 Chenopodium quinoa HOM05D005552 ORTHO05D006743 7.3e-21 106.3 355 23.1
MELO3C007542.2 Cucumis melo HOM05D005552 ORTHO05D006743 7.3e-21 106.3 382 24.6
Glyma.11G058500 Glycine max HOM05D005552 ORTHO05D006743 7.3e-21 106.3 380 23.9
vmacro21371 Vaccinium macrocarpon HOM05D005552 ORTHO05D006743 7.3e-21 106.3 378 24.6
VMungo1215G1500 Vigna mungo HOM05D005552 ORTHO05D006743 9.6e-21 105.9 363 23.4
FAN28G0665 Fragaria x ananassa HOM05D005552 ORTHO05D006743 1.3e-20 105.5 362 25.4
HanXRQChr14g0430701 Helianthus annuus HOM05D005552 ORTHO05D006743 1.3e-20 105.5 366 24.3
Eucgr.I00976 Eucalyptus grandis HOM05D005552 ORTHO05D006743 1.6e-20 105.1 381 23.4
Lsat_1_v5_gn_4_168700 Lactuca sativa HOM05D005552 ORTHO05D006743 1.6e-20 105.1 378 23.8
Lalb_Chr05g0213171 Lupinus albus HOM05D005552 ORTHO05D006743 1.6e-20 105.1 365 23.3
Os03g0240900 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 1.6e-20 105.1 340 25.0
HanXRQChr04g0119851 Helianthus annuus HOM05D005552 ORTHO05D006743 2.1e-20 104.8 253 26.1
Lj2g0010083 Lotus japonicus HOM05D005552 ORTHO05D006743 2.8e-20 104.4 338 24.6
FAN26G2590 Fragaria x ananassa HOM05D005552 ORTHO05D006743 4.8e-20 103.6 366 24.9
Lj6g0016933 Lotus japonicus HOM05D005552 ORTHO05D006743 4.8e-20 103.6 380 25.0
Rhsim01G0119100 Rhododendron simsii HOM05D005552 ORTHO05D006743 4.8e-20 103.6 378 23.3
FvH4_1g15480 Fragaria vesca HOM05D005552 ORTHO05D006743 6.2e-20 103.2 367 24.8
TWI09G0520 Tripterygium wilfordii HOM05D005552 ORTHO05D006743 6.2e-20 103.2 371 24.3
Nitab4.5_0002715g0120 Nicotiana tabacum HOM05D005552 ORTHO05D006743 8.1e-20 102.8 378 25.7
AUR62001963 Chenopodium quinoa HOM05D005552 ORTHO05D006743 1.1e-19 102.4 355 22.8
Haze_15444 Corylus avellana HOM05D005552 ORTHO05D006743 1.8e-19 101.7 403 25.1
ClCG01G016650 Citrullus lanatus HOM05D005552 ORTHO05D006743 1.2e-18 99.0 390 23.6
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea HOM05D005552 ORTHO05D006743 1.5e-18 98.6 395 22.5
FAN19G0212 Fragaria x ananassa HOM05D005552 ORTHO05D006743 2.0e-18 98.2 376 23.9
Zm00001eb030410 Zea mays HOM05D005552 ORTHO05D006743 2.6e-18 97.8 363 24.0
Os12g0586400 Oryza sativa ssp. japonica HOM05D005552 ORTHO05D006743 4.4e-18 97.1 256 24.6
Glyma.01G183800 Glycine max HOM05D005552 ORTHO05D006743 1.7e-17 95.1 384 23.2
CDE04G2042 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 8.4e-17 92.8 465 23.0
Hund16313 Selenicereus undatus HOM05D005552 ORTHO05D006743 8.4e-17 92.8 379 22.7
HPP92_017765 Vanilla planifolia HOM05D005552 ORTHO05D006743 8.4e-17 92.8 359 23.7
SEGI_18564 Sequoiadendron giganteum HOM05D005552 ORTHO05D006743 1.9e-16 91.7 346 24.0
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea HOM05D005552 ORTHO05D006743 3.2e-16 90.9 371 23.2
BcaNung03946 Brassica carinata HOM05D005552 ORTHO05D006743 1.2e-15 89.0 302 22.8
Nitab4.5_0000368g0430 Nicotiana tabacum HOM05D005552 ORTHO05D006743 1.2e-15 89.0 374 24.1
Cre01.g043700 Chlamydomonas reinhardtii HOM05D005552 ORTHO05D006743 4.6e-15 87.0 403 24.3
DCAR_010923 Daucus carota HOM05D005552 ORTHO05D006743 7.8e-15 86.3 286 26.2
ATR0767G265 Amborella trichopoda HOM05D005552 ORTHO05D006743 1.0e-14 85.9 451 23.3
TAR376G0305 Trochodendron aralioides HOM05D005552 ORTHO05D006743 4.8e-12 77.0 347 24.2
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 8.1e-12 76.3 519 22.5
Phvul.002G021300 Phaseolus vulgaris HOM05D005552 ORTHO05D006743 1.4e-11 75.5 323 22.6
Sopen01g043710 Solanum pennellii HOM05D005552 ORTHO05D006743 1.8e-11 75.1 215 26.0
Manes.16G089500 Manihot esculenta HOM05D005552 ORTHO05D006743 1.2e-10 72.4 215 26.0
CsaV3_6G043060 Cucumis sativus L. HOM05D005552 ORTHO05D006743 1.5e-10 72.0 331 23.0
CDE06G0261 Ceratophyllum demersum HOM05D005552 ORTHO05D006743 2.0e-10 71.6 184 26.1
CBR_g38209 Chara braunii HOM05D005552 ORTHO05D006743 4.5e-10 70.5 218 28.4
Peaxi162Scf00073g00015 Petunia axillaris HOM05D005552 ORTHO05D006743 1.7e-09 68.6 209 23.9
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla HOM05D005552 ORTHO05D006743 3.8e-09 67.4 420 23.6
Peaxi162Scf00073g00115 Petunia axillaris HOM05D005552 ORTHO05D006743 2.3e-06 58.2 73 39.7
arahy.Tifrunner.gnm1.ann1.ENA0P5 Arachis hypogaea HOM05D005552 ORTHO05D006743 6.7e-06 56.6 95 29.5
FAN08G3227 Fragaria x ananassa HOM05D005552 ORTHO05D006743 8.7e-06 56.2 362 21.0


User provided reference genes

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