Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026601 Carpinus fangiana HOM05D003555 ORTHO05D123537 3.6e-222 774.6 395 100.0
MD09G1004500 Malus domestica HOM05D003555 ORTHO05D004542 6.2e-49 199.1 390 33.1
MD17G1008500 Malus domestica HOM05D003555 ORTHO05D004542 6.2e-49 199.1 390 32.8
Prupe.3G312200 Prunus persica HOM05D003555 ORTHO05D004542 1.1e-48 198.4 390 32.3
Glyma.19G101000 Glycine max HOM05D003555 ORTHO05D004542 3.1e-48 196.8 388 32.7
Potri.001G322500 Populus trichocarpa HOM05D003555 ORTHO05D004542 4.0e-48 196.4 394 33.8
Lalb_Chr14g0363981 Lupinus albus HOM05D003555 ORTHO05D004542 9.0e-48 195.3 390 32.3
CiPaw.04G001900 Carya illinoinensis HOM05D003555 ORTHO05D004542 1.2e-47 194.9 393 31.0
Lj1g0000762 Lotus japonicus HOM05D003555 ORTHO05D004542 1.2e-47 194.9 339 35.7
Phvul.001G086700 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 1.2e-47 194.9 390 32.3
Pp3c13_14220 Physcomitrium patens HOM05D003555 ORTHO05D004542 1.5e-47 194.5 335 32.8
RcHm_v2.0_Chr2g0176361 Rosa chinensis HOM05D003555 ORTHO05D004542 1.5e-47 194.5 390 31.8
THA.LOC104825653 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 3.4e-47 193.4 393 32.1
ECA232G4336 Erigeron canadensis HOM05D003555 ORTHO05D004542 4.4e-47 193.0 370 32.2
Cfa007176 Carpinus fangiana HOM05D003555 ORTHO05D004542 5.8e-47 192.6 393 31.8
ClCG01G008140 Citrullus lanatus HOM05D003555 ORTHO05D004542 5.8e-47 192.6 393 31.0
Glyma.16G050200 Glycine max HOM05D003555 ORTHO05D004542 5.8e-47 192.6 386 32.4
Mapoly0126s0013 Marchantia polymorpha HOM05D003555 ORTHO05D004542 7.6e-47 192.2 383 31.1
Lj5A90G23 Lonicera japonica HOM05D003555 ORTHO05D004542 9.9e-47 191.8 391 31.5
VMungo0464G0001 Vigna mungo HOM05D003555 ORTHO05D004542 9.9e-47 191.8 339 34.5
Cc05_g01690 Coffea canephora HOM05D003555 ORTHO05D004542 1.3e-46 191.4 390 31.0
TWI34G1938 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 1.3e-46 191.4 391 32.5
TAR622G0101 Trochodendron aralioides HOM05D003555 ORTHO05D004542 1.3e-46 191.4 392 32.1
Dinv11219 Davidia involucrata HOM05D003555 ORTHO05D004542 2.2e-46 190.7 339 33.3
Migut.D01225 Erythranthe guttata HOM05D003555 ORTHO05D004542 2.2e-46 190.7 339 33.0
Manes.04G091900 Manihot esculenta HOM05D003555 ORTHO05D004542 2.2e-46 190.7 390 31.0
FvH4_6g54180 Fragaria vesca HOM05D003555 ORTHO05D004542 2.9e-46 190.3 390 31.8
Glyma.16G146600 Glycine max HOM05D003555 ORTHO05D004542 2.9e-46 190.3 390 32.1
TAR629G2425 Trochodendron aralioides HOM05D003555 ORTHO05D004542 2.9e-46 190.3 393 31.3
MSTRG.11256 Avicennia marina HOM05D003555 ORTHO05D004542 3.8e-46 189.9 339 33.0
CsaV3_5G020170 Cucumis sativus L. HOM05D003555 ORTHO05D004542 3.8e-46 189.9 392 30.1
Phvul.004G070900 Phaseolus vulgaris HOM05D003555 ORTHO05D004542 3.8e-46 189.9 339 34.2
Zm00001eb345260 Zea mays HOM05D003555 ORTHO05D004542 3.8e-46 189.9 386 33.7
FAN09G3428 Fragaria x ananassa HOM05D003555 ORTHO05D004542 4.9e-46 189.5 392 31.9
Hma1.2p1_1187F.1_g265140 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 4.9e-46 189.5 386 31.3
VMungo1383G1114 Vigna mungo HOM05D003555 ORTHO05D004542 4.9e-46 189.5 340 33.8
Duzib264G0281 Durio zibethinus HOM05D003555 ORTHO05D004542 6.4e-46 189.1 389 32.1
THA.LOC104805306 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 6.4e-46 189.1 394 32.0
CAN.G257.127 Capsicum annuum HOM05D003555 ORTHO05D004542 8.4e-46 188.7 390 31.5
HanXRQChr16g0528421 Helianthus annuus HOM05D003555 ORTHO05D004542 8.4e-46 188.7 370 32.4
Oeu058121.1 Olea europaea HOM05D003555 ORTHO05D004542 8.4e-46 188.7 391 31.5
QL02p062748 Quercus lobata HOM05D003555 ORTHO05D004542 8.4e-46 188.7 393 30.8
CAN.G637.54 Capsicum annuum HOM05D003555 ORTHO05D004542 1.1e-45 188.3 390 31.3
COL.COLO4_10540 Corchorus olitorius HOM05D003555 ORTHO05D004542 1.1e-45 188.3 389 32.1
DCAR_021412 Daucus carota HOM05D003555 ORTHO05D004542 1.1e-45 188.3 391 31.2
Lalb_Chr24g0403201 Lupinus albus HOM05D003555 ORTHO05D004542 1.1e-45 188.3 385 32.2
BcaC07g40270 Brassica carinata HOM05D003555 ORTHO05D004542 1.4e-45 188.0 391 32.2
A09p63580 Brassica napus HOM05D003555 ORTHO05D004542 1.4e-45 188.0 392 31.1
BraA09t41708Z Brassica rapa HOM05D003555 ORTHO05D004542 1.4e-45 188.0 391 30.9
MELO3C025061.2 Cucumis melo HOM05D003555 ORTHO05D004542 1.4e-45 188.0 392 30.1
Sp1g11410 Schrenkiella parvula HOM05D003555 ORTHO05D004542 1.4e-45 188.0 390 31.5
FAN02G1454 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.9e-45 187.6 386 32.6
arahy.Tifrunner.gnm1.ann1.HQ0MCX Arachis hypogaea HOM05D003555 ORTHO05D004542 2.4e-45 187.2 338 34.3
BcaC07g41676 Brassica carinata HOM05D003555 ORTHO05D004542 2.4e-45 187.2 390 31.0
BolC8t50972H Brassica oleracea HOM05D003555 ORTHO05D004542 2.4e-45 187.2 390 31.0
THA.LOC104823995 Tarenaya hassleriana HOM05D003555 ORTHO05D004542 2.4e-45 187.2 394 31.7
TPR.G17457 Trifolium pratense HOM05D003555 ORTHO05D004542 2.4e-45 187.2 389 31.9
EL10Ac3g05664 Beta vulgaris HOM05D003555 ORTHO05D004542 3.2e-45 186.8 391 31.5
PSO478G0165 Papaver somniferum HOM05D003555 ORTHO05D004542 3.2e-45 186.8 386 31.6
Peaxi162Scf00171g01130 Petunia axillaris HOM05D003555 ORTHO05D004542 3.2e-45 186.8 390 31.3
TAR374G1733 Trochodendron aralioides HOM05D003555 ORTHO05D004542 3.2e-45 186.8 390 32.3
GSVIVG01008626001 Vitis vinifera HOM05D003555 ORTHO05D004542 3.2e-45 186.8 371 33.2
GSVIVG01033006001 Vitis vinifera HOM05D003555 ORTHO05D004542 3.2e-45 186.8 390 31.5
arahy.Tifrunner.gnm1.ann1.N4MBCZ Arachis hypogaea HOM05D003555 ORTHO05D004542 4.2e-45 186.4 339 33.9
C08p33730 Brassica napus HOM05D003555 ORTHO05D004542 4.2e-45 186.4 390 31.0
C08p47080 Brassica napus HOM05D003555 ORTHO05D004542 4.2e-45 186.4 339 33.3
BolC8t52247H Brassica oleracea HOM05D003555 ORTHO05D004542 4.2e-45 186.4 388 32.0
Dinv23202 Davidia involucrata HOM05D003555 ORTHO05D004542 4.2e-45 186.4 339 32.7
SMO200G0006 Selaginella moellendorffii HOM05D003555 ORTHO05D004542 4.2e-45 186.4 396 31.3
Solyc03g097800.4 Solanum lycopersicum HOM05D003555 ORTHO05D004542 4.2e-45 186.4 390 31.3
unitig_61.g26203 Utricularia gibba HOM05D003555 ORTHO05D004542 4.2e-45 186.4 346 32.9
ATR0582G027 Amborella trichopoda HOM05D003555 ORTHO05D004542 5.4e-45 186.0 391 30.7
BcaB08g34247 Brassica carinata HOM05D003555 ORTHO05D004542 5.4e-45 186.0 389 31.1
AUR62015995 Chenopodium quinoa HOM05D003555 ORTHO05D004542 5.4e-45 186.0 390 30.8
Gohir.A11G063400 Gossypium hirsutum HOM05D003555 ORTHO05D004542 5.4e-45 186.0 393 31.3
MBI11_g08158_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 5.4e-45 186.0 370 32.2
Lsat_1_v5_gn_4_84140 Lactuca sativa HOM05D003555 ORTHO05D004542 7.1e-45 185.7 339 33.0
Os05g0593100 Oryza sativa ssp. japonica HOM05D003555 ORTHO05D004542 7.1e-45 185.7 339 32.7
PGR083G2609 Punica granatum HOM05D003555 ORTHO05D004542 7.1e-45 185.7 335 33.1
Hund11754 Selenicereus undatus HOM05D003555 ORTHO05D004542 7.1e-45 185.7 393 31.8
Glyma.02G065500 Glycine max HOM05D003555 ORTHO05D004542 9.3e-45 185.3 390 31.8
SEGI_35214 Sequoiadendron giganteum HOM05D003555 ORTHO05D004542 9.3e-45 185.3 391 30.2
TWI60G1549 Tripterygium wilfordii HOM05D003555 ORTHO05D004542 9.3e-45 185.3 386 31.9
FAN14G0379 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.2e-44 184.9 390 32.1
Nn5g27103 Nelumbo nucifera HOM05D003555 ORTHO05D004542 1.2e-44 184.9 339 33.6
Sopen03g028540 Solanum pennellii HOM05D003555 ORTHO05D004542 1.2e-44 184.9 390 31.3
CARHR013160 Cardamine hirsuta HOM05D003555 ORTHO05D004542 1.6e-44 184.5 390 30.8
CDE05G2896 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 1.6e-44 184.5 349 33.2
AL1G24480 Arabidopsis lyrata HOM05D003555 ORTHO05D004542 2.1e-44 184.1 391 31.7
MSTRG.22881 Avicennia marina HOM05D003555 ORTHO05D004542 2.1e-44 184.1 390 31.5
BcaC05g25110 Brassica carinata HOM05D003555 ORTHO05D004542 2.1e-44 184.1 390 31.0
COL.COLO4_13344 Corchorus olitorius HOM05D003555 ORTHO05D004542 2.1e-44 184.1 350 32.6
DCAR_016355 Daucus carota HOM05D003555 ORTHO05D004542 2.1e-44 184.1 392 31.6
vmacro19161 Vaccinium macrocarpon HOM05D003555 ORTHO05D004542 2.1e-44 184.1 339 32.4
Ah.13g068520 Amaranthus hybridus HOM05D003555 ORTHO05D004542 2.7e-44 183.7 339 31.9
SalBow1G4818 Salvia bowleyana HOM05D003555 ORTHO05D004542 2.7e-44 183.7 390 30.8
BcaC05g25150 Brassica carinata HOM05D003555 ORTHO05D004542 3.5e-44 183.3 339 32.4
Sed0000891 Sechium edule HOM05D003555 ORTHO05D004542 3.5e-44 183.3 392 29.8
Eucgr.G01943 Eucalyptus grandis HOM05D003555 ORTHO05D004542 4.6e-44 183.0 338 32.8
Thhalv10007948m.g Eutrema salsugineum HOM05D003555 ORTHO05D004542 4.6e-44 183.0 339 33.0
FAN05G2121 Fragaria x ananassa HOM05D003555 ORTHO05D004542 4.6e-44 183.0 320 34.4
Thecc.04G045300 Theobroma cacao HOM05D003555 ORTHO05D004542 4.6e-44 183.0 390 31.8
Aa31LG1G1920 Aethionema arabicum HOM05D003555 ORTHO05D004542 6.0e-44 182.6 415 29.9
Ah.07g207280 Amaranthus hybridus HOM05D003555 ORTHO05D004542 6.0e-44 182.6 339 32.4
Sed0008328 Sechium edule HOM05D003555 ORTHO05D004542 6.0e-44 182.6 391 30.2
CSS0044185 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 1.0e-43 181.8 391 30.7
Gohir.D11G067700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 1.0e-43 181.8 393 31.3
Manes.11G078200 Manihot esculenta HOM05D003555 ORTHO05D004542 1.0e-43 181.8 352 31.2
Potri.017G061100 Populus trichocarpa HOM05D003555 ORTHO05D004542 1.0e-43 181.8 392 31.1
A06p08830 Brassica napus HOM05D003555 ORTHO05D004542 1.3e-43 181.4 339 32.7
C05p10440 Brassica napus HOM05D003555 ORTHO05D004542 1.3e-43 181.4 339 32.2
BolC5t29790H Brassica oleracea HOM05D003555 ORTHO05D004542 1.3e-43 181.4 339 32.2
BraA06t24078Z Brassica rapa HOM05D003555 ORTHO05D004542 1.3e-43 181.4 339 32.7
CSS0013918 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 1.3e-43 181.4 391 30.7
CANSAT64G0789 Cannabis sativa HOM05D003555 ORTHO05D004542 1.3e-43 181.4 341 32.8
Nn4g22182 Nelumbo nucifera HOM05D003555 ORTHO05D004542 1.3e-43 181.4 338 33.1
Psat0s1497g0040 Pisum sativum HOM05D003555 ORTHO05D004542 1.3e-43 181.4 337 34.7
Actinidia18318 Actinidia chinensis HOM05D003555 ORTHO05D004542 1.7e-43 181.0 333 33.0
Duzib187G1504 Durio zibethinus HOM05D003555 ORTHO05D004542 1.7e-43 181.0 389 31.9
AT1G12840 Arabidopsis thaliana HOM05D003555 ORTHO05D004542 2.3e-43 180.6 339 33.0
Sc25g0000460 Simmondsia chinensis HOM05D003555 ORTHO05D004542 2.3e-43 180.6 299 34.1
Sc13g0008590 Simmondsia chinensis HOM05D003555 ORTHO05D004542 3.0e-43 180.3 339 32.7
Atru.chr6.2636 Acer truncatum HOM05D003555 ORTHO05D004542 3.9e-43 179.9 391 30.4
Ciclev10015638m.g Citrus clementina HOM05D003555 ORTHO05D004542 3.9e-43 179.9 390 31.8
Gohir.D04G073600 Gossypium hirsutum HOM05D003555 ORTHO05D004542 5.1e-43 179.5 389 31.9
Medtr7g083720 Medicago truncatula HOM05D003555 ORTHO05D004542 5.1e-43 179.5 397 31.2
BcaB03g13163 Brassica carinata HOM05D003555 ORTHO05D004542 6.6e-43 179.1 390 30.3
C08p15700 Brassica napus HOM05D003555 ORTHO05D004542 6.6e-43 179.1 339 32.2
A08p32590 Brassica napus HOM05D003555 ORTHO05D004542 8.7e-43 178.7 339 32.2
BolC8t49197H Brassica oleracea HOM05D003555 ORTHO05D004542 8.7e-43 178.7 339 32.2
BraA08t35183Z Brassica rapa HOM05D003555 ORTHO05D004542 8.7e-43 178.7 339 32.2
Lsat_1_v5_gn_4_84120 Lactuca sativa HOM05D003555 ORTHO05D004542 8.7e-43 178.7 337 32.3
Actinidia25536 Actinidia chinensis HOM05D003555 ORTHO05D004542 1.5e-42 177.9 333 33.3
Carub.0001s1258 Capsella rubella HOM05D003555 ORTHO05D004542 1.9e-42 177.6 339 31.9
Gohir.A05G334700 Gossypium hirsutum HOM05D003555 ORTHO05D004542 1.9e-42 177.6 391 32.0
Zm00001eb297260 Zea mays HOM05D003555 ORTHO05D004542 1.9e-42 177.6 323 34.4
Hund04735 Selenicereus undatus HOM05D003555 ORTHO05D004542 3.3e-42 176.8 420 29.0
Duzib147G0304 Durio zibethinus HOM05D003555 ORTHO05D004542 4.3e-42 176.4 377 30.8
Gorai.012G082900 Gossypium raimondii HOM05D003555 ORTHO05D004542 5.6e-42 176.0 389 31.1
Actinidia36835 Actinidia chinensis HOM05D003555 ORTHO05D004542 7.3e-42 175.6 371 32.1
Sabra16G0204700 Salix brachista HOM05D003555 ORTHO05D004542 8.1e-41 172.2 359 31.2
SGA_v2.0_scaffold14G07035 Striga asiatica HOM05D003555 ORTHO05D004542 4.0e-40 169.9 390 29.7
Haze_27306 Corylus avellana HOM05D003555 ORTHO05D163602 1.5e-39 167.9 298 35.9
MBI07_g40357_MAGBIO Magnolia biondii HOM05D003555 ORTHO05D004542 7.6e-39 165.6 349 30.4
ECA246G0182 Erigeron canadensis HOM05D003555 ORTHO05D004542 1.3e-38 164.9 257 34.6
Zm00001eb163710 Zea mays HOM05D003555 ORTHO05D004542 2.2e-38 164.1 389 31.4
AagrBONN_evm.TU.Sc2ySwM_228.2553 Anthoceros agrestis HOM05D003555 ORTHO05D004542 3.8e-38 163.3 336 28.3
Cre06.g250250 Chlamydomonas reinhardtii HOM05D003555 ORTHO05D004542 3.8e-38 163.3 347 29.7
Nn3g16313 Nelumbo nucifera HOM05D003555 ORTHO05D004542 2.4e-37 160.6 384 29.7
Haze_14935 Corylus avellana HOM05D003555 ORTHO05D004542 5.4e-37 159.5 452 27.2
Pp3c9_8980 Physcomitrium patens HOM05D003555 ORTHO05D004542 1.8e-35 154.5 385 30.4
Lj9A484G61 Lonicera japonica HOM05D003555 ORTHO05D004542 6.7e-35 152.5 298 32.6
Sabra17G0054300 Salix brachista HOM05D003555 ORTHO05D004542 6.7e-35 152.5 322 30.7
Hma1.2p1_1187F.1_g265130 Hydrangea macrophylla HOM05D003555 ORTHO05D004542 8.7e-35 152.1 292 31.8
CDE05G1333 Ceratophyllum demersum HOM05D003555 ORTHO05D004542 2.5e-34 150.6 349 30.7
Lsat_1_v5_gn_6_50360 Lactuca sativa HOM05D003555 ORTHO05D004542 2.5e-34 150.6 292 32.2
Rhsim08G0195300 Rhododendron simsii HOM05D003555 ORTHO05D004542 1.3e-33 148.3 469 24.7
Ca_08125_v3 Cicer arietinum L. HOM05D003555 ORTHO05D004542 8.1e-33 145.6 294 33.0
MCO15G152 Micromonas commoda HOM05D003555 ORTHO05D004542 8.1e-33 145.6 313 29.7
HPP92_022913 Vanilla planifolia HOM05D003555 ORTHO05D004542 4.0e-32 143.3 292 32.9
Cpa.g.sc70.83 Carica papaya HOM05D003555 ORTHO05D004542 5.3e-32 142.9 292 31.8
CBR_g724 Chara braunii HOM05D003555 ORTHO05D004542 1.5e-31 141.4 250 32.8
HanXRQChr09g0273581 Helianthus annuus HOM05D003555 ORTHO05D004542 1.9e-29 134.4 295 31.9
QL02p069938 Quercus lobata HOM05D003555 ORTHO05D004542 1.2e-28 131.7 302 30.1
PRCOL_00003348 Prasinoderma coloniale HOM05D003555 ORTHO05D004542 1.8e-27 127.9 346 25.1
Gorai.007G072500 Gossypium raimondii HOM05D003555 ORTHO05D004542 5.1e-27 126.3 248 33.5
AUR62021202 Chenopodium quinoa HOM05D003555 ORTHO05D004542 4.0e-24 116.7 244 31.6
Nitab4.5_0007858g0030 Nicotiana tabacum HOM05D003555 ORTHO05D004542 5.8e-23 112.8 390 25.1
Lsat_1_v5_gn_5_10760 Lactuca sativa HOM05D003555 ORTHO05D004542 1.9e-21 107.8 251 29.9
Nitab4.5_0005207g0040 Nicotiana tabacum HOM05D003555 ORTHO05D004542 2.5e-21 107.5 211 32.2
Eucgr.G01949 Eucalyptus grandis HOM05D003555 ORTHO05D004542 1.2e-20 105.1 216 32.9
Oeu058117.1 Olea europaea HOM05D003555 ORTHO05D004542 2.4e-16 90.9 311 26.4
CSS0036109 Camellia sinensis var. sinensis HOM05D003555 ORTHO05D004542 5.3e-16 89.7 292 26.4
FAN09G3010 Fragaria x ananassa HOM05D003555 ORTHO05D004542 1.9e-13 81.3 109 37.6
Actinidia08900 Actinidia chinensis HOM05D003555 ORTHO05D004542 2.7e-12 77.4 328 22.6
THA.LOC104805959 Tarenaya hassleriana HOM05D003555 ORTHO05D022543 5.3e-08 63.2 140 28.6


User provided reference genes

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