Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026593 Carpinus fangiana HOM05D005625 ORTHO05D007564 0.0e+00 1119.0 570 100.0
PRCOL_00002543 Prasinoderma coloniale HOM05D005625 ORTHO05D007564 1.3e-34 152.1 462 31.8
CBR_g2823 Chara braunii HOM05D005625 ORTHO05D007564 3.3e-27 127.5 516 27.1
Oeu028924.1 Olea europaea HOM05D005625 ORTHO05D007564 1.3e-26 125.6 491 27.5
CAN.G990.6 Capsicum annuum HOM05D005625 ORTHO05D007564 3.7e-26 124.0 514 27.4
AUR62030641 Chenopodium quinoa HOM05D005625 ORTHO05D007564 1.1e-25 122.5 509 26.7
Thhalv10018392m.g Eutrema salsugineum HOM05D005625 ORTHO05D007564 1.8e-25 121.7 485 26.4
Gorai.013G133700 Gossypium raimondii HOM05D005625 ORTHO05D007564 3.1e-25 120.9 493 27.0
Cc10_g08740 Coffea canephora HOM05D005625 ORTHO05D007564 4.0e-25 120.6 462 26.6
Gohir.D13G119200 Gossypium hirsutum HOM05D005625 ORTHO05D007564 5.3e-25 120.2 493 27.0
Manes.18G118300 Manihot esculenta HOM05D005625 ORTHO05D007564 5.3e-25 120.2 457 27.1
MSTRG.25496 Avicennia marina HOM05D005625 ORTHO05D007564 6.9e-25 119.8 458 26.2
Glyma.09G021200 Glycine max HOM05D005625 ORTHO05D007564 6.9e-25 119.8 504 26.8
HanXRQChr11g0326321 Helianthus annuus HOM05D005625 ORTHO05D007564 1.2e-24 119.0 445 27.2
ECA232G1187 Erigeron canadensis HOM05D005625 ORTHO05D007564 1.5e-24 118.6 448 27.0
AL2G31100 Arabidopsis lyrata HOM05D005625 ORTHO05D007564 3.4e-24 117.5 433 27.5
Aa31LG4G9140 Aethionema arabicum HOM05D005625 ORTHO05D007564 4.5e-24 117.1 431 27.4
Carub.0002s1829 Capsella rubella HOM05D005625 ORTHO05D007564 4.5e-24 117.1 432 26.6
Ah.02g127420 Amaranthus hybridus HOM05D005625 ORTHO05D007564 7.6e-24 116.3 433 27.9
Sp5g26600 Schrenkiella parvula HOM05D005625 ORTHO05D007564 7.6e-24 116.3 444 27.5
AUR62024898 Chenopodium quinoa HOM05D005625 ORTHO05D007564 1.0e-23 115.9 430 27.4
Ciclev10014850m.g Citrus clementina HOM05D005625 ORTHO05D007564 1.0e-23 115.9 495 26.7
MELO3C011830.2 Cucumis melo HOM05D005625 ORTHO05D007564 1.0e-23 115.9 457 26.0
Thecc.08G177300 Theobroma cacao HOM05D005625 ORTHO05D007564 1.0e-23 115.9 439 26.2
COL.COLO4_24882 Corchorus olitorius HOM05D005625 ORTHO05D007564 1.3e-23 115.5 439 26.4
CsaV3_1G044090 Cucumis sativus L. HOM05D005625 ORTHO05D007564 1.3e-23 115.5 456 26.3
PGR044G1301 Punica granatum HOM05D005625 ORTHO05D007564 1.3e-23 115.5 469 25.8
AT1G71440 Arabidopsis thaliana HOM05D005625 ORTHO05D007564 2.2e-23 114.8 433 26.6
Dinv16108 Davidia involucrata HOM05D005625 ORTHO05D007564 3.8e-23 114.0 439 26.2
FAN18G2766 Fragaria x ananassa HOM05D005625 ORTHO05D007564 3.8e-23 114.0 511 25.2
Pp3c13_4420 Physcomitrium patens HOM05D005625 ORTHO05D007564 3.8e-23 114.0 453 25.8
Sopen11g018630 Solanum pennellii HOM05D005625 ORTHO05D007564 4.9e-23 113.6 459 27.0
FvH4_5g33370 Fragaria vesca HOM05D005625 ORTHO05D007564 6.5e-23 113.2 511 25.2
Prupe.1G544200 Prunus persica HOM05D005625 ORTHO05D007564 6.5e-23 113.2 511 26.0
Aqoxy5G00836 Aquilegia oxysepala HOM05D005625 ORTHO05D007564 8.4e-23 112.8 494 25.5
Gohir.A13G116000 Gossypium hirsutum HOM05D005625 ORTHO05D007564 8.4e-23 112.8 446 26.9
QL09p002063 Quercus lobata HOM05D005625 ORTHO05D007564 8.4e-23 112.8 438 25.6
CANSAT56G1751 Cannabis sativa HOM05D005625 ORTHO05D007564 1.1e-22 112.5 452 25.7
Lj7C421T14 Lonicera japonica HOM05D005625 ORTHO05D007564 1.4e-22 112.1 429 25.2
Sc14g0005960 Simmondsia chinensis HOM05D005625 ORTHO05D007564 1.9e-22 111.7 451 27.1
BolC6t39611H Brassica oleracea HOM05D005625 ORTHO05D007564 2.5e-22 111.3 501 27.3
CARHR291240 Cardamine hirsuta HOM05D005625 ORTHO05D007564 2.5e-22 111.3 434 26.0
MD15G1395400 Malus domestica HOM05D005625 ORTHO05D007564 3.2e-22 110.9 511 26.2
DCAR_017431 Daucus carota HOM05D005625 ORTHO05D007564 4.2e-22 110.5 500 25.6
BraA07t31336Z Brassica rapa HOM05D005625 ORTHO05D007564 7.1e-22 109.8 492 27.6
DCAR_006209 Daucus carota HOM05D005625 ORTHO05D007564 9.3e-22 109.4 500 25.4
Zm00001eb233200 Zea mays HOM05D005625 ORTHO05D007564 1.6e-21 108.6 455 25.5
BcaC08g46580 Brassica carinata HOM05D005625 ORTHO05D007564 2.1e-21 108.2 486 27.6
A07p37730 Brassica napus HOM05D005625 ORTHO05D007564 2.7e-21 107.8 491 27.3
RcHm_v2.0_Chr7g0232101 Rosa chinensis HOM05D005625 ORTHO05D007564 2.7e-21 107.8 492 25.6
Solyc11g042470.1 Solanum lycopersicum HOM05D005625 ORTHO05D007564 3.5e-21 107.5 426 27.5
CiPaw.04G063100 Carya illinoinensis HOM05D005625 ORTHO05D007564 4.6e-21 107.1 451 26.4
Phvul.006G130900 Phaseolus vulgaris HOM05D005625 ORTHO05D007564 4.6e-21 107.1 450 25.6
MCO15G211 Micromonas commoda HOM05D005625 ORTHO05D007564 6.0e-21 106.7 525 26.9
Nitab4.5_0001155g0010 Nicotiana tabacum HOM05D005625 ORTHO05D007564 7.9e-21 106.3 424 27.4
GSVIVG01036380001 Vitis vinifera HOM05D005625 ORTHO05D007564 1.0e-20 105.9 438 24.9
Sed0019265 Sechium edule HOM05D005625 ORTHO05D007564 1.3e-20 105.5 462 25.1
arahy.Tifrunner.gnm1.ann1.23CDJN Arachis hypogaea HOM05D005625 ORTHO05D007564 1.8e-20 105.1 430 27.0
ATR1089G039 Amborella trichopoda HOM05D005625 ORTHO05D007564 2.3e-20 104.8 439 25.5
THA.LOC104810982 Tarenaya hassleriana HOM05D005625 ORTHO05D007564 2.3e-20 104.8 436 25.7
EL10Ac6g14591 Beta vulgaris HOM05D005625 ORTHO05D007564 3.0e-20 104.4 551 25.2
Actinidia29383 Actinidia chinensis HOM05D005625 ORTHO05D007564 5.1e-20 103.6 457 25.6
FAN04G0928 Fragaria x ananassa HOM05D005625 ORTHO05D007564 6.7e-20 103.2 511 25.2
TAR381G1540 Trochodendron aralioides HOM05D005625 ORTHO05D007564 6.7e-20 103.2 443 25.3
arahy.Tifrunner.gnm1.ann1.I4CKLR Arachis hypogaea HOM05D005625 ORTHO05D007564 8.7e-20 102.8 472 25.8
arahy.Tifrunner.gnm1.ann1.U40EKY Arachis hypogaea HOM05D005625 ORTHO05D007564 1.1e-19 102.4 481 25.6
Lj6g0017830 Lotus japonicus HOM05D005625 ORTHO05D007564 1.5e-19 102.1 447 26.8
Medtr2g029250 Medicago truncatula HOM05D005625 ORTHO05D007564 1.9e-19 101.7 449 25.2
TWI18G0532 Tripterygium wilfordii HOM05D005625 ORTHO05D007564 2.5e-19 101.3 445 26.7
unitig_578.g16118 Utricularia gibba HOM05D005625 ORTHO05D007564 2.5e-19 101.3 468 25.9
CSS0007097 Camellia sinensis var. sinensis HOM05D005625 ORTHO05D007564 4.3e-19 100.5 458 26.0
Lalb_Chr15g0088631 Lupinus albus HOM05D005625 ORTHO05D007564 5.7e-19 100.1 450 26.2
Peaxi162Scf00078g00533 Petunia axillaris HOM05D005625 ORTHO05D007564 5.7e-19 100.1 426 26.5
Lsat_1_v5_gn_2_82040 Lactuca sativa HOM05D005625 ORTHO05D007564 7.4e-19 99.8 459 25.1
Potri.019G072700 Populus trichocarpa HOM05D005625 ORTHO05D007564 1.3e-18 99.0 439 24.1
Rhsim02G0173300 Rhododendron simsii HOM05D005625 ORTHO05D007564 1.3e-18 99.0 437 24.0
AagrBONN_evm.TU.Sc2ySwM_344.4267 Anthoceros agrestis HOM05D005625 ORTHO05D007564 2.2e-18 98.2 450 24.4
C06p45600 Brassica napus HOM05D005625 ORTHO05D007564 3.7e-18 97.4 494 26.3
Haze_13951 Corylus avellana HOM05D005625 ORTHO05D007564 8.2e-18 96.3 447 24.4
Psat1g169440 Pisum sativum HOM05D005625 ORTHO05D007564 1.4e-17 95.5 452 25.4
Sabra19G0084000 Salix brachista HOM05D005625 ORTHO05D007564 2.4e-17 94.7 511 23.1
Duzib177G0227 Durio zibethinus HOM05D005625 ORTHO05D007564 5.3e-17 93.6 483 25.5
TPR.G17519 Trifolium pratense HOM05D005625 ORTHO05D007564 5.3e-17 93.6 453 25.6
HPP92_015711 Vanilla planifolia HOM05D005625 ORTHO05D007564 5.3e-17 93.6 417 25.4
SHI16719 Sapria himalayana HOM05D005625 ORTHO05D007564 2.6e-16 91.3 430 24.9
MBI03_g28415_MAGBIO Magnolia biondii HOM05D005625 ORTHO05D007564 3.4e-16 90.9 449 24.5
Pp3c9_6720 Physcomitrium patens HOM05D005625 ORTHO05D007564 5.9e-16 90.1 443 25.7
HPP92_026650 Vanilla planifolia HOM05D005625 ORTHO05D007564 1.0e-15 89.4 417 24.9
VMungo0540G1936 Vigna mungo HOM05D005625 ORTHO05D007564 1.3e-15 89.0 543 23.6
Eucgr.K01840 Eucalyptus grandis HOM05D005625 ORTHO05D007564 6.5e-15 86.7 454 24.7
Cpa.g.sc21.80 Carica papaya HOM05D005625 ORTHO05D007564 6.1e-13 80.1 368 24.2
arahy.Tifrunner.gnm1.ann1.0NEN23 Arachis hypogaea HOM05D005625 ORTHO05D007564 1.0e-12 79.3 511 23.9
Cre02.g095113 Chlamydomonas reinhardtii HOM05D005625 ORTHO05D007564 1.4e-12 79.0 252 27.8
AagrBONN_evm.TU.Sc2ySwM_344.5166 Anthoceros agrestis HOM05D005625 ORTHO05D007564 2.5e-11 74.7 364 24.7
Sabra15G0066000 Salix brachista HOM05D005625 ORTHO05D007564 3.1e-09 67.8 298 23.2
Sabra15G0066200 Salix brachista HOM05D005625 ORTHO05D007564 3.1e-09 67.8 298 23.2
Ca_00793_v3 Cicer arietinum L. HOM05D005625 ORTHO05D007564 9.1e-09 66.2 288 24.3
vmacro11035 Vaccinium macrocarpon HOM05D005625 ORTHO05D007564 2.9e-07 61.2 450 23.8
PGSC0003DMG400019987 Solanum tuberosum HOM05D005625 ORTHO05D007564 7.2e-06 56.6 68 45.6


User provided reference genes

Program Settings