Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026515 Carpinus fangiana HOM05D040851 ORTHO05D024893 0.0e+00 2754.2 1412 100.0
MCO13G436 Micromonas commoda HOM05D040851 ORTHO05D024893 1.1e-28 133.7 473 26.6
PRCOL_00001367 Prasinoderma coloniale HOM05D040851 ORTHO05D024893 5.5e-23 114.8 573 23.0
Cre01.g035950 Chlamydomonas reinhardtii HOM05D064943 ORTHO05D024893 5.9e-17 94.7 595 24.7
PRCOL_00006558 Prasinoderma coloniale HOM05D064943 ORTHO05D024893 6.1e-14 84.7 454 22.0
MCO12G383 Micromonas commoda HOM05D004715 ORTHO05D005644 3.7e-11 75.5 201 30.3
Pp3c20_16980 Physcomitrium patens HOM05D004715 ORTHO05D005644 3.1e-10 72.4 185 30.3
Pp3c20_17250 Physcomitrium patens HOM05D004715 ORTHO05D005644 3.1e-10 72.4 185 30.3
Cre03.g161050 Chlamydomonas reinhardtii HOM05D004715 ORTHO05D005644 2.6e-09 69.3 184 28.3
PRCOL_00005608 Prasinoderma coloniale HOM05D004715 ORTHO05D005644 3.5e-09 68.9 200 30.0
arahy.Tifrunner.gnm1.ann1.EP2671 Arachis hypogaea HOM05D004715 ORTHO05D005644 7.7e-09 67.8 202 26.7
QL05p027948 Quercus lobata HOM05D004715 ORTHO05D005644 7.7e-09 67.8 185 28.6
arahy.Tifrunner.gnm1.ann1.GHMT6A Arachis hypogaea HOM05D004715 ORTHO05D005644 1.3e-08 67.0 202 26.2
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 3.8e-08 65.5 164 29.3
Atru.chr1.3057 Acer truncatum HOM05D004715 ORTHO05D005644 8.5e-08 64.3 133 32.3
CiPaw.01G245000 Carya illinoinensis HOM05D004715 ORTHO05D005644 8.5e-08 64.3 185 27.6
Ciclev10027256m.g Citrus clementina HOM05D004715 ORTHO05D005644 8.5e-08 64.3 242 27.3
Atru.BG.159.p Acer truncatum HOM05D004715 ORTHO05D005644 1.1e-07 63.9 133 32.3
Lalb_Chr22g0350991 Lupinus albus HOM05D004715 ORTHO05D005644 1.1e-07 63.9 180 26.1
Prupe.3G081400 Prunus persica HOM05D004715 ORTHO05D005644 1.1e-07 63.9 184 26.1
Eucgr.F02544 Eucalyptus grandis HOM05D004715 ORTHO05D005644 3.2e-07 62.4 112 33.9
Mapoly0008s0246 Marchantia polymorpha HOM05D004715 ORTHO05D005644 3.2e-07 62.4 181 24.9
Cfa001997 Carpinus fangiana HOM05D004715 ORTHO05D005644 4.2e-07 62.0 185 27.6
Manes.11G053500 Manihot esculenta HOM05D004715 ORTHO05D005644 4.2e-07 62.0 204 26.0
CDE02G3949 Ceratophyllum demersum HOM05D004715 ORTHO05D005644 5.5e-07 61.6 199 24.1
AUR62005173 Chenopodium quinoa HOM05D004715 ORTHO05D005644 5.5e-07 61.6 111 32.4
FAN23G0015 Fragaria x ananassa HOM05D004715 ORTHO05D005644 5.5e-07 61.6 179 27.4
Cc04_g04100 Coffea canephora HOM05D004715 ORTHO05D005644 7.2e-07 61.2 112 33.0
SMO347G0348 Selaginella moellendorffii HOM05D004715 ORTHO05D005644 7.2e-07 61.2 113 33.6
Actinidia01764 Actinidia chinensis HOM05D004715 ORTHO05D005644 9.4e-07 60.8 181 26.5
FvH4_1g25440 Fragaria vesca HOM05D004715 ORTHO05D005644 9.4e-07 60.8 179 26.8
Oeu063807.1 Olea europaea HOM05D004715 ORTHO05D005644 9.4e-07 60.8 112 33.0
ATR0210G050 Amborella trichopoda HOM05D004715 ORTHO05D005644 1.2e-06 60.5 112 30.4
MSTRG.11119 Avicennia marina HOM05D004715 ORTHO05D005644 1.2e-06 60.5 112 34.8
CSS0021095 Camellia sinensis var. sinensis HOM05D004715 ORTHO05D005644 1.2e-06 60.5 158 26.6
AUR62000794 Chenopodium quinoa HOM05D004715 ORTHO05D005644 1.2e-06 60.5 111 31.5
Dinv30576 Davidia involucrata HOM05D004715 ORTHO05D005644 1.2e-06 60.5 181 26.5
Lsat_1_v5_gn_5_132400 Lactuca sativa HOM05D004715 ORTHO05D005644 1.2e-06 60.5 181 26.5
Oeu052278.1 Olea europaea HOM05D004715 ORTHO05D005644 1.2e-06 60.5 112 32.1
Os05g0453900 Oryza sativa ssp. japonica HOM05D004715 ORTHO05D005644 1.2e-06 60.5 181 26.0
Hund21699 Selenicereus undatus HOM05D004715 ORTHO05D005644 1.2e-06 60.5 111 32.4
TWI18G0840 Tripterygium wilfordii HOM05D004715 ORTHO05D005644 1.2e-06 60.5 112 34.8
AagrBONN_evm.TU.Sc2ySwM_368.872 Anthoceros agrestis HOM05D004715 ORTHO05D005644 1.6e-06 60.1 112 33.0
FAN19G1260 Fragaria x ananassa HOM05D000191 ORTHO05D005644 1.6e-06 60.1 179 26.8
Glyma.04G133700 Glycine max HOM05D004715 ORTHO05D005644 1.6e-06 60.1 181 26.5
GSVIVG01017274001 Vitis vinifera HOM05D004715 ORTHO05D005644 1.6e-06 60.1 113 31.9
FAN26G3166 Fragaria x ananassa HOM05D004715 ORTHO05D005644 2.1e-06 59.7 179 26.8
Thecc.06G070800 Theobroma cacao HOM05D004715 ORTHO05D005644 2.1e-06 59.7 182 25.3
EL10Ac4g09393 Beta vulgaris HOM05D004715 ORTHO05D005644 2.7e-06 59.3 111 32.4
Ciclev10026407m.g Citrus clementina HOM05D004715 ORTHO05D005644 2.7e-06 59.3 133 30.8
Hma1.2p1_0317F.1_g123670 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 2.7e-06 59.3 181 26.5
Hma1.2p1_1398F.1_g280822 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 2.7e-06 59.3 181 26.5
SalBow2G3045 Salvia bowleyana HOM05D004715 ORTHO05D005644 2.7e-06 59.3 112 33.9
Sc14g0006620 Simmondsia chinensis HOM05D004715 ORTHO05D005644 2.7e-06 59.3 111 31.5
Carub.0002s2733 Capsella rubella HOM05D004715 ORTHO05D005644 3.6e-06 58.9 204 26.5
Carub.0005s0104 Capsella rubella HOM05D004715 ORTHO05D005644 3.6e-06 58.9 204 26.5
ECA234G4462 Erigeron canadensis HOM05D004715 ORTHO05D005644 3.6e-06 58.9 126 30.2
Migut.I00797 Erythranthe guttata HOM05D004715 ORTHO05D005644 3.6e-06 58.9 112 33.0
Lj3g0005798 Lotus japonicus HOM05D004715 ORTHO05D005644 3.6e-06 58.9 181 26.5
Potri.006G142300 Populus trichocarpa HOM05D004715 ORTHO05D005644 3.6e-06 58.9 204 25.5
Ah.06g189580 Amaranthus hybridus HOM05D004715 ORTHO05D005644 4.7e-06 58.5 111 27.9
FAN28G2078 Fragaria x ananassa HOM05D004715 ORTHO05D005644 4.7e-06 58.5 179 26.3
MD17G1206800 Malus domestica HOM05D004715 ORTHO05D005644 4.7e-06 58.5 114 30.7
SEGI_27675 Sequoiadendron giganteum HOM05D004715 ORTHO05D005644 4.7e-06 58.5 112 31.2
Sopen09g003430 Solanum pennellii HOM05D004715 ORTHO05D005644 4.7e-06 58.5 113 32.7
MELO3C023404.2 Cucumis melo HOM05D004715 ORTHO05D005644 6.1e-06 58.2 111 33.3
CsaV3_7G032580 Cucumis sativus L. HOM05D004715 ORTHO05D005644 6.1e-06 58.2 111 33.3
Duzib235G0750 Durio zibethinus HOM05D004715 ORTHO05D005644 6.1e-06 58.2 203 26.1
Lj5A69G39 Lonicera japonica HOM05D004715 ORTHO05D005644 6.1e-06 58.2 112 31.2
Phvul.005G004200 Phaseolus vulgaris HOM05D004715 ORTHO05D005644 6.1e-06 58.2 181 26.5
THA.LOC104812498 Tarenaya hassleriana HOM05D004715 ORTHO05D005644 6.1e-06 58.2 204 26.0
BolC2t09760H Brassica oleracea HOM05D004715 ORTHO05D005644 8.0e-06 57.8 204 27.0
Hma1.2p1_1398F.1_g280805 Hydrangea macrophylla HOM05D004715 ORTHO05D005644 8.0e-06 57.8 112 30.4
PGR102G1320 Punica granatum HOM05D004715 ORTHO05D005644 8.0e-06 57.8 112 31.2
HPP92_025406 Vanilla planifolia HOM05D004715 ORTHO05D005644 8.0e-06 57.8 112 31.2


User provided reference genes

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