Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026500 Carpinus fangiana HOM05D005721 ORTHO05D006758 0.0e+00 1535.0 776 100.0
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 9.4e-25 119.8 504 25.8
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 1.2e-24 119.4 519 23.5
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 1.1e-22 112.8 540 23.1
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 5.7e-22 110.5 512 23.8
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 9.7e-22 109.8 534 25.1
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 9.7e-22 109.8 520 24.4
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 2.2e-21 108.6 506 23.5
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 3.7e-21 107.8 567 23.6
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 3.7e-21 107.8 482 24.5
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 4.8e-21 107.5 553 24.4
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 6.3e-21 107.1 509 24.0
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 1.4e-20 105.9 483 23.4
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 1.4e-20 105.9 520 22.3
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 2.4e-20 105.1 478 23.6
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 2.4e-20 105.1 596 21.6
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 3.1e-20 104.8 502 23.9
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 3.1e-20 104.8 476 23.7
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 5.3e-20 104.0 524 23.5
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 5.3e-20 104.0 527 22.6
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 5.3e-20 104.0 488 23.0
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 5.3e-20 104.0 515 22.7
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 5.3e-20 104.0 483 23.2
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 7.0e-20 103.6 516 24.0
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 7.0e-20 103.6 518 22.2
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 9.1e-20 103.2 541 22.4
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 9.1e-20 103.2 541 22.4
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 9.1e-20 103.2 531 22.2
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 1.2e-19 102.8 537 21.4
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 1.2e-19 102.8 485 23.9
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 1.2e-19 102.8 472 23.3
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 1.6e-19 102.4 468 22.9
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 2.0e-19 102.1 554 23.1
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 2.6e-19 101.7 498 23.3
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 2.6e-19 101.7 561 22.5
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 2.6e-19 101.7 536 22.9
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 3.5e-19 101.3 475 22.7
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 4.5e-19 100.9 476 23.1
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 5.9e-19 100.5 474 22.8
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 7.7e-19 100.1 503 21.5
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 7.7e-19 100.1 467 22.7
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 1.0e-18 99.8 464 22.0
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.0e-18 99.8 518 23.4
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 1.3e-18 99.4 525 23.2
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 1.7e-18 99.0 474 22.4
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 2.2e-18 98.6 672 22.6
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 2.9e-18 98.2 511 22.9
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 3.8e-18 97.8 503 21.3
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 5.0e-18 97.4 516 23.4
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 5.0e-18 97.4 535 23.7
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 5.0e-18 97.4 511 22.7
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 5.0e-18 97.4 525 23.0
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 6.5e-18 97.1 469 23.0
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 8.5e-18 96.7 523 22.9
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 1.1e-17 96.3 503 21.9
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 1.1e-17 96.3 470 23.2
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 1.5e-17 95.9 573 21.6
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 1.5e-17 95.9 516 24.6
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 2.5e-17 95.1 503 23.7
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 2.5e-17 95.1 513 22.4
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 2.5e-17 95.1 508 23.0
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 3.2e-17 94.7 522 23.0
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 3.2e-17 94.7 516 23.3
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 5.5e-17 94.0 578 21.8
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 7.2e-17 93.6 523 22.8
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 1.2e-16 92.8 473 22.6
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 2.1e-16 92.0 515 21.9
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 2.1e-16 92.0 515 21.9
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 2.1e-16 92.0 515 21.9
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 2.1e-16 92.0 562 22.2
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 6.1e-16 90.5 558 21.3
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 8.0e-16 90.1 470 21.7
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 1.0e-15 89.7 516 22.3
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 2.3e-15 88.6 573 21.5
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 2.3e-15 88.6 518 22.2
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 3.0e-15 88.2 459 22.0
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 6.7e-15 87.0 517 21.9
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 8.8e-15 86.7 473 22.0
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 8.8e-15 86.7 515 21.7
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 7.5e-14 83.6 518 21.2
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 7.5e-14 83.6 473 22.6
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 1.7e-13 82.4 535 23.0
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 2.2e-13 82.0 517 21.3
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 3.7e-13 81.3 525 21.0
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 6.3e-13 80.5 563 21.1
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 6.3e-13 80.5 512 22.5
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 8.3e-13 80.1 512 19.9
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 1.1e-12 79.7 560 20.5
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 4.1e-12 77.8 558 22.0
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 5.3e-12 77.4 562 20.3
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 2.0e-11 75.5 469 20.9
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 7.7e-11 73.6 477 22.6
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 2.2e-10 72.0 565 20.0
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 2.9e-10 71.6 268 24.3
MCO06G118 Micromonas commoda HOM05D005721 ORTHO05D006758 5.0e-10 70.9 263 26.6
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 6.5e-10 70.5 331 22.7
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 2.5e-09 68.6 569 21.1
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 3.2e-09 68.2 570 20.4
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 5.5e-09 67.4 162 27.2


User provided reference genes

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