Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026408 Carpinus fangiana HOM05D004208 ORTHO05D121639 2.8e-247 858.2 452 100.0
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 1.3e-18 98.6 188 30.9
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 5.0e-18 96.7 230 29.6
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 5.0e-18 96.7 188 30.3
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 8.5e-18 95.9 268 27.2
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 8.5e-18 95.9 230 27.8
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 1.4e-17 95.1 188 31.4
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 1.4e-17 95.1 193 30.6
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 2.5e-17 94.4 238 27.7
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 2.5e-17 94.4 230 27.0
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 2.5e-17 94.4 247 26.3
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 2.5e-17 94.4 230 27.4
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 4.2e-17 93.6 191 31.9
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 5.5e-17 93.2 230 27.8
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 7.2e-17 92.8 258 26.0
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 9.4e-17 92.4 244 27.0
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 1.2e-16 92.0 315 24.4
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 1.2e-16 92.0 188 30.9
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 1.2e-16 92.0 314 25.8
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.6e-16 91.7 191 30.4
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 2.1e-16 91.3 230 27.8
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 2.1e-16 91.3 233 27.5
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 2.1e-16 91.3 233 27.5
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 2.1e-16 91.3 233 27.5
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 2.7e-16 90.9 241 26.1
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 2.7e-16 90.9 189 30.7
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 2.7e-16 90.9 231 28.1
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 3.6e-16 90.5 230 27.4
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 3.6e-16 90.5 264 27.3
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 3.6e-16 90.5 232 26.7
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 4.6e-16 90.1 240 27.9
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 4.6e-16 90.1 235 26.0
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 6.1e-16 89.7 241 25.7
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 6.1e-16 89.7 191 29.8
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 7.9e-16 89.4 188 29.3
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 7.9e-16 89.4 231 27.3
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 1.0e-15 89.0 312 24.4
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.8e-15 88.2 237 25.7
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 1.8e-15 88.2 191 29.8
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 2.3e-15 87.8 256 25.8
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 2.3e-15 87.8 306 22.9
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 3.0e-15 87.4 241 24.9
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 3.9e-15 87.0 209 27.3
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 3.9e-15 87.0 184 29.3
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 3.9e-15 87.0 230 26.5
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 5.1e-15 86.7 273 27.1
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 6.7e-15 86.3 275 26.5
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 6.7e-15 86.3 247 25.5
Lalb_Chr06g0171061 Lupinus albus HOM05D004208 ORTHO05D005156 6.7e-15 86.3 171 30.4
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 6.7e-15 86.3 256 25.4
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 6.7e-15 86.3 233 27.0
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 8.8e-15 85.9 268 24.6
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 8.8e-15 85.9 312 23.4
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 8.8e-15 85.9 259 24.3
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 1.5e-14 85.1 191 28.8
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.5e-14 85.1 269 27.1
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 1.5e-14 85.1 245 25.3
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 1.5e-14 85.1 188 29.8
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 2.0e-14 84.7 231 26.8
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 2.0e-14 84.7 270 25.9
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 2.0e-14 84.7 197 30.5
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 2.0e-14 84.7 268 25.4
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 2.0e-14 84.7 227 28.2
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 2.5e-14 84.3 246 28.0
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 3.3e-14 84.0 232 26.3
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 4.3e-14 83.6 191 28.8
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.3e-14 83.6 312 23.1
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 4.3e-14 83.6 314 24.5
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 9.7e-14 82.4 275 26.2
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 1.3e-13 82.0 236 25.4
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 1.3e-13 82.0 209 28.2
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.3e-13 82.0 281 23.5
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 1.3e-13 82.0 233 27.0
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 1.3e-13 82.0 268 25.7
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.3e-13 82.0 276 26.4
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 1.3e-13 82.0 236 26.7
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 1.7e-13 81.6 233 24.5
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 1.7e-13 81.6 274 25.5
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 2.2e-13 81.3 191 28.8
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 2.8e-13 80.9 222 26.6
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 3.7e-13 80.5 271 25.1
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.7e-13 80.5 267 24.0
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 4.8e-13 80.1 206 26.7
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 6.3e-13 79.7 230 24.8
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 8.2e-13 79.3 221 26.2
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 1.4e-12 78.6 206 26.7
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 1.8e-12 78.2 276 25.0
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 1.8e-12 78.2 276 25.0
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 2.4e-12 77.8 206 26.7
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 5.3e-12 76.6 235 27.2
MCO02G332 Micromonas commoda HOM05D004208 ORTHO05D005156 9.1e-12 75.9 202 27.2
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.0e-11 74.7 321 22.7
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 2.6e-11 74.3 185 28.1
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 4.5e-11 73.6 276 22.5
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 1.0e-10 72.4 195 25.6
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 1.3e-10 72.0 286 24.8
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 1.4e-09 68.6 158 28.5
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 1.2e-08 65.5 316 22.2
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 1.0e-07 62.4 211 23.7
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 1.0e-07 62.4 194 23.7


User provided reference genes

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