Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 9.8e-186 653.3 322 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 8.1e-15 85.5 344 27.0
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 1.4e-14 84.7 368 25.8
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 1.4e-14 84.7 341 24.6
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.4e-14 84.7 321 27.1
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 5.3e-14 82.8 333 28.8
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 1.5e-13 81.3 338 25.4
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 1.5e-13 81.3 324 25.0
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 7.6e-13 79.0 300 26.7
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 7.6e-13 79.0 345 25.8
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 1.3e-12 78.2 345 24.3
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 1.7e-12 77.8 331 27.8
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 2.9e-12 77.0 348 24.7
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 3.8e-12 76.6 297 25.6
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 6.5e-12 75.9 320 26.6
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 6.5e-12 75.9 311 25.1
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 1.4e-11 74.7 313 26.2
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.4e-11 74.7 302 25.2
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.4e-11 74.7 302 25.2
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.9e-11 74.3 321 23.7
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 1.9e-11 74.3 340 23.8
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 1.9e-11 74.3 317 24.9
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.5e-11 73.9 304 25.0
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 3.2e-11 73.6 340 25.9
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 4.2e-11 73.2 347 22.8
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 4.2e-11 73.2 319 26.3
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 4.2e-11 73.2 319 26.3
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 4.2e-11 73.2 314 25.2
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 4.2e-11 73.2 311 24.4
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 5.5e-11 72.8 346 24.9
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 5.5e-11 72.8 319 26.0
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 7.1e-11 72.4 320 26.6
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 7.1e-11 72.4 307 26.7
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 9.3e-11 72.0 319 26.6
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 9.3e-11 72.0 305 25.6
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 1.2e-10 71.6 339 24.2
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.2e-10 71.6 277 28.2
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 1.6e-10 71.2 338 23.4
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 1.6e-10 71.2 338 23.4
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 1.6e-10 71.2 308 24.0
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 2.1e-10 70.9 304 25.7
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.1e-10 70.9 321 25.2
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 2.1e-10 70.9 322 25.2
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 2.7e-10 70.5 298 25.2
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 2.7e-10 70.5 321 24.9
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 3.5e-10 70.1 332 23.2
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 4.6e-10 69.7 299 26.4
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 4.6e-10 69.7 326 26.4
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 6.0e-10 69.3 318 25.8
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 7.9e-10 68.9 306 24.8
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 7.9e-10 68.9 278 27.7
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.0e-09 68.6 322 25.5
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 1.0e-09 68.6 305 25.6
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 1.0e-09 68.6 315 24.1
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 1.0e-09 68.6 297 23.2
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 1.3e-09 68.2 318 24.2
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 1.3e-09 68.2 315 24.8
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 1.8e-09 67.8 301 24.6
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 1.8e-09 67.8 319 25.1
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 1.8e-09 67.8 316 24.7
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 2.3e-09 67.4 319 24.8
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 2.3e-09 67.4 305 25.2
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 3.0e-09 67.0 296 25.0
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 3.9e-09 66.6 299 24.7
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 3.9e-09 66.6 348 24.4
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 3.9e-09 66.6 339 23.9
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 5.1e-09 66.2 298 24.8
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 5.1e-09 66.2 273 26.4
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 5.1e-09 66.2 314 24.2
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 5.1e-09 66.2 308 26.3
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 6.7e-09 65.9 313 24.6
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 6.7e-09 65.9 315 25.1
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 8.7e-09 65.5 308 24.0
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 8.7e-09 65.5 299 25.4
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 8.7e-09 65.5 318 25.5
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 8.7e-09 65.5 317 24.6
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 8.7e-09 65.5 310 24.2
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 1.1e-08 65.1 340 23.5
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 1.5e-08 64.7 304 23.4
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.5e-08 64.7 315 24.1
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 1.9e-08 64.3 343 23.9
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 1.9e-08 64.3 339 24.2
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 1.9e-08 64.3 315 25.4
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 1.9e-08 64.3 281 24.9
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 3.3e-08 63.5 339 25.1
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 3.3e-08 63.5 291 25.1
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 4.3e-08 63.2 266 24.4
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 4.3e-08 63.2 325 24.0
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 4.3e-08 63.2 305 24.9
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 4.3e-08 63.2 299 22.7
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 5.7e-08 62.8 311 24.4
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 5.7e-08 62.8 310 23.5
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 5.7e-08 62.8 301 23.9
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 7.4e-08 62.4 313 23.6
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 9.6e-08 62.0 278 23.7
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 1.6e-07 61.2 326 24.5
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 2.1e-07 60.8 277 24.5
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 2.1e-07 60.8 340 22.4
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 3.7e-07 60.1 89 38.2
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 4.8e-07 59.7 80 41.2
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 6.3e-07 59.3 279 24.4
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 8.2e-07 58.9 84 41.7
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 1.1e-06 58.5 119 37.0
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.1e-06 58.5 119 37.8
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 3.1e-06 57.0 292 25.7
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 5.3e-06 56.2 276 25.7


User provided reference genes

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