Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026329 Carpinus fangiana HOM05D004893 ORTHO05D006320 0.0e+00 2066.2 1055 100.0
PRCOL_00005731 Prasinoderma coloniale HOM05D004893 ORTHO05D006320 3.4e-17 95.1 392 27.6
MD13G1251600 Malus domestica HOM05D004893 ORTHO05D006320 2.0e-14 85.9 90 45.6
Atru.chr13.1778 Acer truncatum HOM05D004893 ORTHO05D006320 7.8e-14 84.0 95 44.2
Atru.chr7.881 Acer truncatum HOM05D004893 ORTHO05D006320 1.0e-13 83.6 95 44.2
EL10Ac6g14738 Beta vulgaris HOM05D004893 ORTHO05D006320 1.0e-13 83.6 136 38.2
Psat4g012800 Pisum sativum HOM05D004893 ORTHO05D006320 1.0e-13 83.6 119 37.8
Lalb_Chr07g0180551 Lupinus albus HOM05D004893 ORTHO05D006320 1.7e-13 82.8 130 35.4
AagrBONN_evm.TU.Sc2ySwM_228.3065 Anthoceros agrestis HOM05D004893 ORTHO05D006320 2.3e-13 82.4 77 49.4
Prupe.1G084200 Prunus persica HOM05D004893 ORTHO05D006320 2.3e-13 82.4 90 45.6
Cre04.g215350 Chlamydomonas reinhardtii HOM05D004893 ORTHO05D006320 3.9e-13 81.6 170 34.1
Mapoly0156s0021 Marchantia polymorpha HOM05D004893 ORTHO05D006320 3.9e-13 81.6 320 24.4
SMO356G0292 Selaginella moellendorffii HOM05D004893 ORTHO05D006320 3.9e-13 81.6 84 40.5
CBR_g49376 Chara braunii HOM05D004893 ORTHO05D006320 5.0e-13 81.3 323 23.5
HanXRQChr09g0273501 Helianthus annuus HOM05D004893 ORTHO05D006320 5.0e-13 81.3 123 38.2
Hma1.2p1_0321F.1_g124570 Hydrangea macrophylla HOM05D004893 ORTHO05D006320 5.0e-13 81.3 140 34.3
Cc05_g16000 Coffea canephora HOM05D004893 ORTHO05D006320 6.6e-13 80.9 105 40.0
arahy.Tifrunner.gnm1.ann1.B5GTII Arachis hypogaea HOM05D004893 ORTHO05D006320 8.6e-13 80.5 135 34.1
SalBow8G3700 Salvia bowleyana HOM05D004893 ORTHO05D006320 8.6e-13 80.5 90 45.6
Medtr4g127820 Medicago truncatula HOM05D004893 ORTHO05D006320 1.1e-12 80.1 86 48.8
Sabra06G0128100 Salix brachista HOM05D004893 ORTHO05D006320 1.1e-12 80.1 90 45.6
Ciclev10007405m.g Citrus clementina HOM05D004893 ORTHO05D006320 1.5e-12 79.7 105 38.1
Pp3c7_4120 Physcomitrium patens HOM05D004893 ORTHO05D006320 1.5e-12 79.7 216 28.2
ECA240G4652 Erigeron canadensis HOM05D004893 ORTHO05D006320 1.9e-12 79.3 120 37.5
Lsat_1_v5_gn_7_72221 Lactuca sativa HOM05D004893 ORTHO05D006320 1.9e-12 79.3 79 48.1
Peaxi162Scf00452g00844 Petunia axillaris HOM05D004893 ORTHO05D006320 1.9e-12 79.3 90 45.6
Potri.018G091100 Populus trichocarpa HOM05D004893 ORTHO05D006320 1.9e-12 79.3 90 46.7
QL02p098221 Quercus lobata HOM05D004893 ORTHO05D006320 1.9e-12 79.3 122 40.2
Rhsim13G0225800 Rhododendron simsii HOM05D004893 ORTHO05D006320 1.9e-12 79.3 94 43.6
TPR.G5437 Trifolium pratense HOM05D004893 ORTHO05D006320 1.9e-12 79.3 97 41.2
MSTRG.16114 Avicennia marina HOM05D004893 ORTHO05D006320 2.5e-12 79.0 90 44.4
FAN12G2097 Fragaria x ananassa HOM05D004893 ORTHO05D006320 2.5e-12 79.0 94 42.6
Manes.06G023100 Manihot esculenta HOM05D004893 ORTHO05D006320 2.5e-12 79.0 79 49.4
TAR627G1078 Trochodendron aralioides HOM05D004893 ORTHO05D006320 2.5e-12 79.0 105 39.0
Gohir.A05G004264 Gossypium hirsutum HOM05D004893 ORTHO05D006320 3.3e-12 78.6 90 43.3
Gohir.D05G004900 Gossypium hirsutum HOM05D004893 ORTHO05D006320 3.3e-12 78.6 90 43.3
Gorai.009G004800 Gossypium raimondii HOM05D004893 ORTHO05D006320 3.3e-12 78.6 90 43.3
PSO063G4841 Papaver somniferum HOM05D004893 ORTHO05D006320 3.3e-12 78.6 124 37.9
Potri.006G166500 Populus trichocarpa HOM05D004893 ORTHO05D006320 3.3e-12 78.6 90 44.4
Ah.09g231700 Amaranthus hybridus HOM05D004893 ORTHO05D006320 4.3e-12 78.2 119 37.8
CANSAT11G1129 Cannabis sativa HOM05D004893 ORTHO05D006320 4.3e-12 78.2 90 42.2
CiPaw.08G035400 Carya illinoinensis HOM05D004893 ORTHO05D006320 4.3e-12 78.2 92 43.5
Duzib150G0781 Durio zibethinus HOM05D004893 ORTHO05D006320 4.3e-12 78.2 130 35.4
FvH4_4g07920 Fragaria vesca HOM05D004893 ORTHO05D006320 4.3e-12 78.2 94 42.6
Solyc07g066410.4 Solanum lycopersicum HOM05D004893 ORTHO05D006320 4.3e-12 78.2 90 45.6
Nn7g38118 Nelumbo nucifera HOM05D004893 ORTHO05D006320 5.6e-12 77.8 94 39.4
PGR044G2140 Punica granatum HOM05D004893 ORTHO05D006320 5.6e-12 77.8 84 46.4
vmacro21776 Vaccinium macrocarpon HOM05D004893 ORTHO05D006320 5.6e-12 77.8 94 41.5
AT2G18900 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 7.3e-12 77.4 145 35.2
Actinidia07346 Actinidia chinensis HOM05D004893 ORTHO05D006320 9.5e-12 77.0 94 40.4
CSS0008978 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 9.5e-12 77.0 104 39.4
CSS0040034 Camellia sinensis var. sinensis HOM05D004893 ORTHO05D006320 9.5e-12 77.0 104 39.4
Cfa013310 Carpinus fangiana HOM05D004893 ORTHO05D006320 9.5e-12 77.0 102 40.2
THA.LOC104803489 Tarenaya hassleriana HOM05D004893 ORTHO05D006320 9.5e-12 77.0 116 37.1
Cfa010313 Carpinus fangiana HOM05D004893 ORTHO05D006320 1.2e-11 76.6 102 40.2
CDE08G1653 Ceratophyllum demersum HOM05D004893 ORTHO05D006320 1.2e-11 76.6 90 43.3
Thhalv10022562m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 1.2e-11 76.6 95 45.3
FAN07G0898 Fragaria x ananassa HOM05D004893 ORTHO05D006320 1.2e-11 76.6 94 41.5
Glyma.13G097400 Glycine max HOM05D004893 ORTHO05D006320 1.2e-11 76.6 169 27.8
Lj4g0004814 Lotus japonicus HOM05D004893 ORTHO05D006320 1.2e-11 76.6 95 42.1
RcHm_v2.0_Chr4g0401591 Rosa chinensis HOM05D004893 ORTHO05D006320 1.2e-11 76.6 94 41.5
TWI34G0813 Tripterygium wilfordii HOM05D004893 ORTHO05D006320 1.6e-11 76.3 102 37.3
HPP92_012201 Vanilla planifolia HOM05D004893 ORTHO05D006320 1.6e-11 76.3 130 35.4
AL3G53020 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 2.1e-11 75.9 145 34.5
CARHR109460 Cardamine hirsuta HOM05D004893 ORTHO05D006320 2.1e-11 75.9 82 47.6
PSO782G3725 Papaver somniferum HOM05D004893 ORTHO05D006320 2.1e-11 75.9 124 37.1
BcaC06g36488 Brassica carinata HOM05D004893 ORTHO05D006320 2.8e-11 75.5 94 41.5
A07p01760 Brassica napus HOM05D004893 ORTHO05D006320 2.8e-11 75.5 94 41.5
C07p03690 Brassica napus HOM05D004893 ORTHO05D006320 2.8e-11 75.5 94 41.5
BolC7t40765H Brassica oleracea HOM05D004893 ORTHO05D006320 2.8e-11 75.5 94 41.5
BraA07t27976Z Brassica rapa HOM05D004893 ORTHO05D006320 2.8e-11 75.5 94 41.5
Ca_21236_v3 Cicer arietinum L. HOM05D004893 ORTHO05D006320 2.8e-11 75.5 119 36.1
Migut.M01562 Erythranthe guttata HOM05D004893 ORTHO05D006320 2.8e-11 75.5 79 48.1
FAN22G1078 Fragaria x ananassa HOM05D004893 ORTHO05D006320 2.8e-11 75.5 94 41.5
Sp3g32370 Schrenkiella parvula HOM05D004893 ORTHO05D006320 2.8e-11 75.5 89 47.2
SEGI_38878 Sequoiadendron giganteum HOM05D004893 ORTHO05D006320 2.8e-11 75.5 84 41.7
Thecc.09G175700 Theobroma cacao HOM05D004893 ORTHO05D006320 2.8e-11 75.5 130 34.6
RcHm_v2.0_Chr4g0401681 Rosa chinensis HOM05D004893 ORTHO05D006320 3.6e-11 75.1 94 40.4
Cpa.g.sc523.1 Carica papaya HOM05D004893 ORTHO05D006320 4.7e-11 74.7 62 56.5
Os12g0609800 Oryza sativa ssp. japonica HOM05D004893 ORTHO05D006320 4.7e-11 74.7 94 38.3
Sc12g0007760 Simmondsia chinensis HOM05D004893 ORTHO05D006320 4.7e-11 74.7 106 38.7
Sopen07g034580 Solanum pennellii HOM05D004893 ORTHO05D006320 4.7e-11 74.7 105 38.1
Carub.0003s3314 Capsella rubella HOM05D004893 ORTHO05D006320 6.2e-11 74.3 145 34.5
VMungo1215G1808 Vigna mungo HOM05D004893 ORTHO05D006320 6.2e-11 74.3 125 33.6
Nitab4.5_0001749g0080 Nicotiana tabacum HOM05D004893 ORTHO05D006320 8.0e-11 73.9 83 47.0
Zm00001eb031520 Zea mays HOM05D004893 ORTHO05D006320 8.0e-11 73.9 94 37.2
Dinv42517 Davidia involucrata HOM05D004893 ORTHO05D006320 1.0e-10 73.6 94 39.4
MCO01G002 Micromonas commoda HOM05D004893 ORTHO05D006320 1.0e-10 73.6 88 40.9
Phvul.003G144100 Phaseolus vulgaris HOM05D004893 ORTHO05D006320 1.0e-10 73.6 125 33.6
Sed0012855 Sechium edule HOM05D004893 ORTHO05D006320 1.4e-10 73.2 79 46.8
AUR62042215 Chenopodium quinoa HOM05D004893 ORTHO05D006320 1.8e-10 72.8 66 51.5
ClCG06G013450 Citrullus lanatus HOM05D004893 ORTHO05D006320 1.8e-10 72.8 79 48.1
MELO3C017452.2 Cucumis melo HOM05D004893 ORTHO05D006320 1.8e-10 72.8 79 46.8
Lj8C187G7 Lonicera japonica HOM05D004893 ORTHO05D006320 1.8e-10 72.8 79 45.6
CsaV3_1G031710 Cucumis sativus L. HOM05D004893 ORTHO05D006320 2.3e-10 72.4 79 46.8
FAN17G0276 Fragaria x ananassa HOM05D004893 ORTHO05D006320 2.3e-10 72.4 172 32.6
GSVIVG01030738001 Vitis vinifera HOM05D004893 ORTHO05D006320 2.3e-10 72.4 79 46.8
Aa31LG8G15990 Aethionema arabicum HOM05D004893 ORTHO05D006320 3.1e-10 72.0 92 43.5
COL.COLO4_37741 Corchorus olitorius HOM05D004893 ORTHO05D006320 4.0e-10 71.6 73 47.9
DCAR_013745 Daucus carota HOM05D004893 ORTHO05D006320 5.2e-10 71.2 97 37.1
Sed0012025 Sechium edule HOM05D004893 ORTHO05D006320 5.2e-10 71.2 79 46.8
Haze_03433 Corylus avellana HOM05D004893 ORTHO05D006320 6.8e-10 70.9 62 53.2
AUR62033061 Chenopodium quinoa HOM05D004893 ORTHO05D006320 8.9e-10 70.5 61 54.1
Eucgr.C02353 Eucalyptus grandis HOM05D004893 ORTHO05D006320 8.9e-10 70.5 72 45.8
Nitab4.5_0008437g0020 Nicotiana tabacum HOM05D004893 ORTHO05D006320 1.2e-09 70.1 88 46.6
Aqoxy3G03036 Aquilegia oxysepala HOM05D004893 ORTHO05D006320 1.5e-09 69.7 105 34.3
Glyma.17G062200 Glycine max HOM05D004893 ORTHO05D006320 1.5e-09 69.7 90 36.7
ATR1098G135 Amborella trichopoda HOM05D004893 ORTHO05D006320 3.4e-09 68.6 80 43.8
Thhalv10024453m.g Eutrema salsugineum HOM05D004893 ORTHO05D006320 4.4e-09 68.2 485 23.3
SGA_v2.0_scaffold186G40224 Striga asiatica HOM05D004893 ORTHO05D006320 4.4e-09 68.2 340 24.4
Carub.0007s0802 Capsella rubella HOM05D004893 ORTHO05D006320 7.5e-09 67.4 122 35.2
BolC1t00640H Brassica oleracea HOM05D004893 ORTHO05D006320 9.8e-09 67.0 93 39.8
AL7G19230 Arabidopsis lyrata HOM05D004893 ORTHO05D006320 3.7e-08 65.1 122 33.6
Hund06466 Selenicereus undatus HOM05D004893 ORTHO05D006320 4.9e-08 64.7 55 54.5
MD16G1255900 Malus domestica HOM05D004893 ORTHO05D006320 4.1e-07 61.6 48 54.2
AT3G26480 Arabidopsis thaliana HOM05D004893 ORTHO05D006320 5.4e-07 61.2 122 32.8
C01p06460 Brassica napus HOM05D004893 ORTHO05D006320 7.0e-07 60.8 127 32.3
arahy.Tifrunner.gnm1.ann1.48BVGN Arachis hypogaea HOM05D004893 ORTHO05D006320 9.2e-07 60.5 139 30.2
Oeu016137.1 Olea europaea HOM05D004893 ORTHO05D001543 1.6e-06 59.7 68 47.1
CARHR240500 Cardamine hirsuta HOM05D004893 ORTHO05D006320 7.8e-06 57.4 88 34.1


User provided reference genes

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