Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026274 Carpinus fangiana HOM05D009015 ORTHO05D013560 0.0e+00 1112.8 551 100.0
Cfa025223 Carpinus fangiana HOM05D009015 ORTHO05D013560 4.7e-95 352.8 495 38.4
Cfa026686 Carpinus fangiana HOM05D009015 ORTHO05D013560 1.5e-93 347.8 503 37.4
Cfa024039 Carpinus fangiana HOM05D009015 ORTHO05D013560 1.8e-91 340.9 489 38.4
Cfa027198 Carpinus fangiana HOM05D009015 ORTHO05D013560 6.8e-86 322.4 492 37.0
Cfa021623 Carpinus fangiana HOM05D009015 ORTHO05D013560 7.5e-77 292.4 492 35.6
Cfa026797 Carpinus fangiana HOM05D009015 ORTHO05D013560 1.2e-74 285.0 507 34.1
Cfa024391 Carpinus fangiana HOM05D009015 ORTHO05D013560 1.0e-73 282.0 532 33.1
Ca_28617_v3 Cicer arietinum L. HOM05D009015 ORTHO05D013560 1.6e-58 231.5 426 33.3
Ca_29184_v3 Cicer arietinum L. HOM05D009015 ORTHO05D013560 2.6e-53 214.2 467 31.9
Pp3s32_470 Physcomitrium patens HOM05D000198 ORTHO05D013560 7.8e-50 202.6 427 31.6
Pp3s58_306 Physcomitrium patens HOM05D009015 ORTHO05D013560 2.1e-47 194.5 410 32.9
Pp3s34_340 Physcomitrium patens HOM05D009015 ORTHO05D013560 2.4e-43 181.0 464 29.5
Pp3s34_230 Physcomitrium patens HOM05D009015 ORTHO05D013560 5.6e-40 169.9 459 28.3
Pp3s58_280 Physcomitrium patens HOM05D009015 ORTHO05D013560 4.2e-19 100.5 146 39.0
VMungo0464G1501 Vigna mungo HOM05D000398 ORTHO05D002677 9.4e-11 72.8 413 21.8
DCAR_013486 Daucus carota HOM05D000398 ORTHO05D002677 6.1e-10 70.1 384 23.7
Hund15099 Selenicereus undatus HOM05D000398 ORTHO05D002677 1.4e-09 68.9 346 25.4
Sed0015378 Sechium edule HOM05D000398 ORTHO05D002677 2.3e-09 68.2 421 22.1
Manes.08G153700 Manihot esculenta HOM05D000398 ORTHO05D002677 3.9e-09 67.4 445 22.9
Cfa023221 Carpinus fangiana HOM05D004650 ORTHO05D005715 5.1e-09 67.0 169 31.4
Ah.12g061600 Amaranthus hybridus HOM05D000398 ORTHO05D002677 6.7e-09 66.6 378 23.5
Pp3c1_14670 Physcomitrium patens HOM05D000398 ORTHO05D002677 6.7e-09 66.6 383 21.7
SalBow1G2979 Salvia bowleyana HOM05D000398 ORTHO05D002677 2.5e-08 64.7 361 23.0
Migut.K00220 Erythranthe guttata HOM05D000398 ORTHO05D002677 4.3e-08 63.9 438 21.9
Phvul.004G073100 Phaseolus vulgaris HOM05D000398 ORTHO05D002677 7.4e-08 63.2 414 21.5
FAN12G2726 Fragaria x ananassa HOM05D000907 ORTHO05D000753 9.7e-08 62.8 344 23.3
Medtr6g027650 Medicago truncatula HOM05D000398 ORTHO05D002677 1.3e-07 62.4 379 22.7
ClCG04G004610 Citrullus lanatus HOM05D000398 ORTHO05D002677 1.7e-07 62.0 408 21.1
Medtr6g027680 Medicago truncatula HOM05D000398 ORTHO05D002677 1.7e-07 62.0 376 22.1
Psat1g089880 Pisum sativum HOM05D000398 ORTHO05D002677 1.7e-07 62.0 353 21.0
Glyma.05G089200 Glycine max HOM05D000398 ORTHO05D002677 2.2e-07 61.6 407 20.6
AT5G36940 Arabidopsis thaliana HOM05D000398 ORTHO05D002677 3.7e-07 60.8 374 21.4
arahy.Tifrunner.gnm1.ann1.VYG7JT Arachis hypogaea HOM05D000398 ORTHO05D002677 3.7e-07 60.8 367 21.3
Medtr6g027660 Medicago truncatula HOM05D000398 ORTHO05D002677 3.7e-07 60.8 381 21.0
TPR.G35637 Trifolium pratense HOM05D000398 ORTHO05D002677 4.8e-07 60.5 374 20.6
AUR62043362 Chenopodium quinoa HOM05D000398 ORTHO05D002677 8.2e-07 59.7 435 22.3
Nn6g32395 Nelumbo nucifera HOM05D000398 ORTHO05D002677 8.2e-07 59.7 382 23.6
Dinv25047 Davidia involucrata HOM05D000398 ORTHO05D002677 1.1e-06 59.3 427 20.6
SalBow6G0538 Salvia bowleyana HOM05D000398 ORTHO05D002677 1.1e-06 59.3 431 20.6
SalBow6G3302 Salvia bowleyana HOM05D000398 ORTHO05D002677 1.1e-06 59.3 431 20.6
CsaV3_4G011960 Cucumis sativus L. HOM05D000398 ORTHO05D002677 1.8e-06 58.5 397 24.4
Prupe.7G012500 Prunus persica HOM05D000398 ORTHO05D002677 1.8e-06 58.5 357 23.0
Zm00001eb222840 Zea mays HOM05D000398 ORTHO05D002677 1.8e-06 58.5 389 22.6
CBR_g61206 Chara braunii HOM05D000398 ORTHO05D002677 3.1e-06 57.8 391 21.2
CsaV3_4G011950 Cucumis sativus L. HOM05D000398 ORTHO05D002677 3.1e-06 57.8 402 20.9
Rhsim03G0049900 Rhododendron simsii HOM05D000398 ORTHO05D002677 3.1e-06 57.8 357 22.1
Sed0004096 Sechium edule HOM05D000398 ORTHO05D002677 3.1e-06 57.8 441 20.4
VMungo1383G2237 Vigna mungo HOM05D000398 ORTHO05D002677 4.1e-06 57.4 411 19.2
FvH4_4g35270 Fragaria vesca HOM05D000907 ORTHO05D000753 5.3e-06 57.0 347 23.3
unitig_60.g25487 Utricularia gibba HOM05D000398 ORTHO05D002677 5.3e-06 57.0 418 21.8
vmacro07655 Vaccinium macrocarpon HOM05D000398 ORTHO05D002677 5.3e-06 57.0 416 21.2
GSVIVG01029987001 Vitis vinifera HOM05D000398 ORTHO05D002677 5.3e-06 57.0 402 22.1
MBI11_g10546_MAGBIO Magnolia biondii HOM05D000398 ORTHO05D002677 6.9e-06 56.6 426 21.8
Hund15108 Selenicereus undatus HOM05D000398 ORTHO05D002677 6.9e-06 56.6 433 21.7
EL10Ac2g03324 Beta vulgaris HOM05D000398 ORTHO05D002677 9.1e-06 56.2 373 23.6
AUR62042156 Chenopodium quinoa HOM05D000398 ORTHO05D002677 9.1e-06 56.2 417 22.1
Thecc.05G242800 Theobroma cacao HOM05D000398 ORTHO05D002677 9.1e-06 56.2 378 22.5
TWI32G1303 Tripterygium wilfordii HOM05D000398 ORTHO05D002677 9.1e-06 56.2 433 21.2


User provided reference genes

Program Settings