Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026131 Carpinus fangiana HOM05D001571 ORTHO05D125441 0.0e+00 1531.5 753 100.0
SEGI_32337 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 4.2e-14 84.3 376 24.7
Cfa025154 Carpinus fangiana HOM05D001571 ORTHO05D005985 7.2e-14 83.6 325 25.8
SEGI_11659 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 3.6e-13 81.3 383 23.8
unitig_578.g16703 Utricularia gibba HOM05D001571 ORTHO05D005985 3.6e-13 81.3 350 24.6
AagrBONN_evm.TU.Sc2ySwM_369.561 Anthoceros agrestis HOM05D001571 ORTHO05D002889 4.7e-13 80.9 233 27.5
SMO134G0264 Selaginella moellendorffii HOM05D001571 ORTHO05D005985 4.7e-13 80.9 430 23.5
Thecc.05G252600 Theobroma cacao HOM05D001571 ORTHO05D005985 8.0e-13 80.1 359 24.8
Sed0007647 Sechium edule HOM05D001571 ORTHO05D002889 1.8e-12 79.0 244 25.4
SalBow4G1289 Salvia bowleyana HOM05D001571 ORTHO05D005985 2.3e-12 78.6 340 24.1
Mapoly0130s0025 Marchantia polymorpha HOM05D001571 ORTHO05D005985 8.9e-12 76.6 457 23.9
SEGI_20989 Sequoiadendron giganteum HOM05D001571 ORTHO05D002889 1.2e-11 76.3 247 23.5
Medtr2g062560 Medicago truncatula HOM05D001571 ORTHO05D005985 1.5e-11 75.9 340 23.5
MSTRG.9233 Avicennia marina HOM05D001571 ORTHO05D002889 2.0e-11 75.5 334 24.0
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 2.0e-11 75.5 362 25.4
Sed0014678 Sechium edule HOM05D001571 ORTHO05D002889 4.4e-11 74.3 261 24.9
SGA_v2.0_scaffold95G28760 Striga asiatica HOM05D001571 ORTHO05D005985 1.3e-10 72.8 290 25.5
Pp3c18_15890 Physcomitrium patens HOM05D001571 ORTHO05D005985 3.7e-10 71.2 287 24.0
Sc11g0009330 Simmondsia chinensis HOM05D001571 ORTHO05D005985 4.9e-10 70.9 368 24.5
Migut.N01651 Erythranthe guttata HOM05D001571 ORTHO05D005985 6.3e-10 70.5 290 23.8
Eucgr.G02896 Eucalyptus grandis HOM05D001571 ORTHO05D002889 6.3e-10 70.5 174 26.4
SEGI_18608 Sequoiadendron giganteum HOM05D001571 ORTHO05D005985 6.3e-10 70.5 290 23.8
vmacro22472 Vaccinium macrocarpon HOM05D001571 ORTHO05D005985 6.3e-10 70.5 292 24.0
ECA232G1166 Erigeron canadensis HOM05D001571 ORTHO05D002889 8.3e-10 70.1 221 23.5
HanXRQChr09g0247691 Helianthus annuus HOM05D001571 ORTHO05D002889 8.3e-10 70.1 221 23.1
Sp5g20510 Schrenkiella parvula HOM05D001571 ORTHO05D002889 8.3e-10 70.1 357 22.1
Lalb_Chr21g0307331 Lupinus albus HOM05D001571 ORTHO05D002889 1.1e-09 69.7 228 23.2
Cc02_g26730 Coffea canephora HOM05D001571 ORTHO05D005985 1.4e-09 69.3 341 25.5
Lalb_Chr20g0108241 Lupinus albus HOM05D001571 ORTHO05D005985 1.4e-09 69.3 333 22.2
MELO3C008768.2 Cucumis melo HOM05D001571 ORTHO05D002889 1.8e-09 68.9 361 22.2
Ca_07180_v3 Cicer arietinum L. HOM05D001571 ORTHO05D002889 2.4e-09 68.6 267 24.3
Ca_29879_v3 Cicer arietinum L. HOM05D001571 ORTHO05D002889 2.4e-09 68.6 267 24.3
Lsat_1_v5_gn_9_66280 Lactuca sativa HOM05D001571 ORTHO05D002889 2.4e-09 68.6 221 23.1
PGR142G2455 Punica granatum HOM05D001571 ORTHO05D002889 2.4e-09 68.6 242 25.2
QL08p058007 Quercus lobata HOM05D001571 ORTHO05D002889 3.1e-09 68.2 243 25.5
Prupe.2G228000 Prunus persica HOM05D001571 ORTHO05D002889 4.1e-09 67.8 244 24.6
Oeu020242.1 Olea europaea HOM05D001571 ORTHO05D005985 7.0e-09 67.0 289 23.9
HPP92_024828 Vanilla planifolia HOM05D001571 ORTHO05D005985 7.0e-09 67.0 288 24.7
CsaV3_2G009420 Cucumis sativus L. HOM05D001571 ORTHO05D002889 1.2e-08 66.2 244 23.8
Pp3c12_14920 Physcomitrium patens HOM05D001571 ORTHO05D002889 2.7e-08 65.1 180 24.4
AagrBONN_evm.TU.Sc2ySwM_228.3771 Anthoceros agrestis HOM05D001571 ORTHO05D002889 4.5e-08 64.3 269 21.9
Gohir.A10G211800 Gossypium hirsutum HOM05D001571 ORTHO05D002889 4.5e-08 64.3 228 21.9
vmacro07143 Vaccinium macrocarpon HOM05D001571 ORTHO05D002889 4.5e-08 64.3 265 23.8
CSS0000600 Camellia sinensis var. sinensis HOM05D001571 ORTHO05D002889 5.9e-08 63.9 276 20.3
Cc02_g26710 Coffea canephora HOM05D001571 ORTHO05D005985 5.9e-08 63.9 288 24.7
Dinv43950 Davidia involucrata HOM05D001571 ORTHO05D005985 5.9e-08 63.9 372 22.0
Gohir.D10G219800 Gossypium hirsutum HOM05D001571 ORTHO05D002889 5.9e-08 63.9 228 21.9
Gorai.011G246500 Gossypium raimondii HOM05D001571 ORTHO05D002889 5.9e-08 63.9 228 21.9
RcHm_v2.0_Chr1g0365681 Rosa chinensis HOM05D001571 ORTHO05D002889 5.9e-08 63.9 271 22.5
Ah.15g093150 Amaranthus hybridus HOM05D001571 ORTHO05D005985 1.0e-07 63.2 354 24.0
Dinv43509 Davidia involucrata HOM05D001571 ORTHO05D005985 1.0e-07 63.2 290 25.5
FvH4_7g21240 Fragaria vesca HOM05D001571 ORTHO05D002889 1.0e-07 63.2 247 23.1
Gorai.012G068200 Gossypium raimondii HOM05D001571 ORTHO05D002889 1.0e-07 63.2 239 22.6
Rhsim07G0048800 Rhododendron simsii HOM05D001571 ORTHO05D005985 1.0e-07 63.2 287 22.0
ATR0737G027 Amborella trichopoda HOM05D001571 ORTHO05D005985 1.3e-07 62.8 186 26.3
Gohir.D04G061300 Gossypium hirsutum HOM05D001571 ORTHO05D002889 1.3e-07 62.8 239 22.6
Os07g0575500 Oryza sativa ssp. japonica HOM05D001571 ORTHO05D005985 1.3e-07 62.8 249 24.5
MSTRG.4994 Avicennia marina HOM05D001571 ORTHO05D005985 2.3e-07 62.0 290 23.4
SMO239G0002 Selaginella moellendorffii HOM05D001571 ORTHO05D002889 2.9e-07 61.6 256 22.3
FAN10G2236 Fragaria x ananassa HOM05D001571 ORTHO05D002889 8.6e-07 60.1 243 22.6
SMO241G0025 Selaginella moellendorffii HOM05D001571 ORTHO05D002889 4.3e-06 57.8 174 24.7


User provided reference genes

Program Settings