Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026119 Carpinus fangiana HOM05D006384 ORTHO05D007917 6.7e-241 837.0 448 100.0
Lj1g0002515 Lotus japonicus HOM05D006384 ORTHO05D007917 2.4e-17 94.4 227 29.5
PSO801G0099 Papaver somniferum HOM05D006384 ORTHO05D007917 9.3e-17 92.4 225 29.8
PSO339G6114 Papaver somniferum HOM05D006384 ORTHO05D007917 1.2e-16 92.0 225 29.3
MELO3C009346.2 Cucumis melo HOM05D006384 ORTHO05D007917 4.6e-16 90.1 224 29.5
AagrBONN_evm.TU.Sc2ySwM_117.2066 Anthoceros agrestis HOM05D006384 ORTHO05D007917 7.9e-16 89.4 235 28.9
AUR62040461 Chenopodium quinoa HOM05D006384 ORTHO05D007917 7.9e-16 89.4 225 28.4
Psat3g043320 Pisum sativum HOM05D006384 ORTHO05D007917 7.9e-16 89.4 225 28.9
CBR_g45408 Chara braunii HOM05D006384 ORTHO05D007917 1.0e-15 89.0 227 28.2
arahy.Tifrunner.gnm1.ann1.FRB5VT Arachis hypogaea HOM05D006384 ORTHO05D007917 1.3e-15 88.6 225 28.0
arahy.Tifrunner.gnm1.ann1.TG2889 Arachis hypogaea HOM05D006384 ORTHO05D007917 1.7e-15 88.2 225 28.0
FAN14G1974 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.3e-15 87.8 233 30.0
FAN14G4113 Fragaria x ananassa HOM05D006384 ORTHO05D007917 2.3e-15 87.8 233 30.0
Peaxi162Scf00488g00042 Petunia axillaris HOM05D006384 ORTHO05D007917 2.3e-15 87.8 225 28.0
CSS0039092 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 3.0e-15 87.4 148 34.5
ClCG10G020230 Citrullus lanatus HOM05D006384 ORTHO05D007917 3.0e-15 87.4 222 28.8
CsaV3_3G035870 Cucumis sativus L. HOM05D006384 ORTHO05D007917 3.0e-15 87.4 224 29.0
Actinidia40017 Actinidia chinensis HOM05D006384 ORTHO05D007917 3.9e-15 87.0 153 34.6
CiPaw.10G132500 Carya illinoinensis HOM05D006384 ORTHO05D007917 3.9e-15 87.0 235 28.5
Oeu016975.2 Olea europaea HOM05D006384 ORTHO05D007917 5.1e-15 86.7 227 30.8
Medtr7g101760 Medicago truncatula HOM05D006384 ORTHO05D007917 8.7e-15 85.9 233 28.3
FAN02G0742 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.1e-14 85.5 233 29.6
SEGI_26624 Sequoiadendron giganteum HOM05D006384 ORTHO05D007917 1.1e-14 85.5 231 27.7
TPR.G9375 Trifolium pratense HOM05D006384 ORTHO05D007917 1.1e-14 85.5 225 28.0
TWI74G0201 Tripterygium wilfordii HOM05D006384 ORTHO05D007917 1.1e-14 85.5 225 28.0
FAN09G1862 Fragaria x ananassa HOM05D006384 ORTHO05D007917 1.5e-14 85.1 230 29.6
EL10Ac7g16562 Beta vulgaris HOM05D006384 ORTHO05D007917 1.9e-14 84.7 145 33.8
CAN.G509.15 Capsicum annuum HOM05D006384 ORTHO05D007917 1.9e-14 84.7 225 26.7
HanXRQChr01g0027531 Helianthus annuus HOM05D006384 ORTHO05D007917 1.9e-14 84.7 222 27.9
Nn2g11540 Nelumbo nucifera HOM05D006384 ORTHO05D007917 1.9e-14 84.7 224 27.7
Phvul.001G178300 Phaseolus vulgaris HOM05D006384 ORTHO05D007917 1.9e-14 84.7 227 28.6
GSVIVG01025711001 Vitis vinifera HOM05D006384 ORTHO05D007917 1.9e-14 84.7 227 28.2
Migut.L01690 Erythranthe guttata HOM05D006384 ORTHO05D007917 2.5e-14 84.3 227 28.6
Hund20279 Selenicereus undatus HOM05D006384 ORTHO05D007917 2.5e-14 84.3 227 28.2
Lj2A115T51 Lonicera japonica HOM05D006384 ORTHO05D007917 3.3e-14 84.0 222 28.8
Os10g0443200 Oryza sativa ssp. japonica HOM05D006384 ORTHO05D007917 3.3e-14 84.0 232 29.3
Potri.006G126200 Populus trichocarpa HOM05D006384 ORTHO05D007917 3.3e-14 84.0 222 28.8
CBR_g30715 Chara braunii HOM05D001230 ORTHO05D007917 4.3e-14 83.6 224 27.2
Glyma.19G182800 Glycine max HOM05D006384 ORTHO05D007917 4.3e-14 83.6 225 27.1
Aqoxy2G01819 Aquilegia oxysepala HOM05D006384 ORTHO05D007917 5.6e-14 83.2 227 28.2
BcaB01g03801 Brassica carinata HOM05D006384 ORTHO05D007917 5.6e-14 83.2 222 27.9
Ca_08852_v3 Cicer arietinum L. HOM05D006384 ORTHO05D007917 5.6e-14 83.2 227 28.2
Cc06_g04070 Coffea canephora HOM05D006384 ORTHO05D007917 5.6e-14 83.2 229 28.8
Prupe.6G234600 Prunus persica HOM05D006384 ORTHO05D007917 5.6e-14 83.2 234 27.8
Rhsim03G0093600 Rhododendron simsii HOM05D006384 ORTHO05D007917 5.6e-14 83.2 222 27.9
Sopen10g035590 Solanum pennellii HOM05D006384 ORTHO05D007917 5.6e-14 83.2 225 27.1
Ah.15g092420 Amaranthus hybridus HOM05D006384 ORTHO05D007917 7.3e-14 82.8 225 28.0
Solyc10g086210.2 Solanum lycopersicum HOM05D006384 ORTHO05D007917 7.3e-14 82.8 225 27.1
ATR0680G046 Amborella trichopoda HOM05D006384 ORTHO05D007917 9.6e-14 82.4 222 27.5
BcaC01g05625 Brassica carinata HOM05D006384 ORTHO05D007917 9.6e-14 82.4 222 27.9
MSTRG.10316 Avicennia marina HOM05D006384 ORTHO05D007917 1.3e-13 82.0 235 28.9
Gohir.A04G072900 Gossypium hirsutum HOM05D006384 ORTHO05D007917 1.3e-13 82.0 236 27.1
Aa31LG5G22260 Aethionema arabicum HOM05D006384 ORTHO05D007917 1.6e-13 81.6 222 27.9
A03p20380 Brassica napus HOM05D006384 ORTHO05D007917 1.6e-13 81.6 223 28.7
C03p23970 Brassica napus HOM05D006384 ORTHO05D007917 1.6e-13 81.6 223 28.7
BraA03t11282Z Brassica rapa HOM05D006384 ORTHO05D007917 1.6e-13 81.6 223 28.7
Gohir.D04G111800 Gossypium hirsutum HOM05D006384 ORTHO05D007917 1.6e-13 81.6 235 27.2
MD12G1115500 Malus domestica HOM05D006384 ORTHO05D007917 1.6e-13 81.6 235 27.7
Sp4g19300 Schrenkiella parvula HOM05D006384 ORTHO05D007917 1.6e-13 81.6 222 27.5
BolC3t14788H Brassica oleracea HOM05D006384 ORTHO05D007917 2.1e-13 81.3 223 28.7
CDE06G0314 Ceratophyllum demersum HOM05D006384 ORTHO05D007917 2.1e-13 81.3 222 28.4
Thhalv10016975m.g Eutrema salsugineum HOM05D006384 ORTHO05D007917 2.1e-13 81.3 222 27.9
RcHm_v2.0_Chr3g0469981 Rosa chinensis HOM05D006384 ORTHO05D007917 2.1e-13 81.3 237 27.4
DCAR_009302 Daucus carota HOM05D006384 ORTHO05D007917 2.8e-13 80.9 224 28.1
Gorai.009G415700 Gossypium raimondii HOM05D006384 ORTHO05D007917 2.8e-13 80.9 235 27.2
VMungo1383G1856 Vigna mungo HOM05D006384 ORTHO05D007917 2.8e-13 80.9 225 27.1
AT2G37020 Arabidopsis thaliana HOM05D006384 ORTHO05D007917 3.6e-13 80.5 222 27.5
COL.COLO4_26986 Corchorus olitorius HOM05D006384 ORTHO05D001525 3.6e-13 80.5 222 27.0
Hma1.2p1_0205F.1_g087265 Hydrangea macrophylla HOM05D006384 ORTHO05D007917 3.6e-13 80.5 225 28.0
Mapoly0009s0045 Marchantia polymorpha HOM05D006384 ORTHO05D007917 3.6e-13 80.5 236 27.1
Sed0012269 Sechium edule HOM05D006384 ORTHO05D007917 3.6e-13 80.5 222 28.4
THA.LOC104823480 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 3.6e-13 80.5 232 26.7
Thecc.05G063500 Theobroma cacao HOM05D006384 ORTHO05D007917 4.8e-13 80.1 235 27.2
AL4G33330 Arabidopsis lyrata HOM05D006384 ORTHO05D007917 6.2e-13 79.7 222 27.5
Haze_20571 Corylus avellana HOM05D006384 ORTHO05D007917 6.2e-13 79.7 222 27.0
Lalb_Chr20g0112661 Lupinus albus HOM05D006384 ORTHO05D007917 6.2e-13 79.7 225 27.1
Carub.0004s1888 Capsella rubella HOM05D006384 ORTHO05D007917 8.1e-13 79.3 222 26.6
Eucgr.A01141 Eucalyptus grandis HOM05D006384 ORTHO05D007917 8.1e-13 79.3 225 28.0
VMungo1383G2663 Vigna mungo HOM05D006384 ORTHO05D007917 8.1e-13 79.3 234 26.9
CARHR131500 Cardamine hirsuta HOM05D006384 ORTHO05D007917 1.1e-12 79.0 222 27.0
SGA_v2.0_scaffold452G51820 Striga asiatica HOM05D006384 ORTHO05D007917 1.1e-12 79.0 226 28.3
SalBow5G1519 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.8e-12 78.2 229 28.4
SalBow5G1643 Salvia bowleyana HOM05D006384 ORTHO05D007917 1.8e-12 78.2 229 28.4
PSO832G0438 Papaver somniferum HOM05D006384 ORTHO05D007917 3.1e-12 77.4 88 40.9
ECA248G2568 Erigeron canadensis HOM05D006384 ORTHO05D007917 5.3e-12 76.6 220 26.4
TAR369G0955 Trochodendron aralioides HOM05D006384 ORTHO05D007917 5.3e-12 76.6 222 27.0
Duzib093G1098 Durio zibethinus HOM05D006384 ORTHO05D007917 6.9e-12 76.3 235 26.8
Sc20g0005270 Simmondsia chinensis HOM05D006384 ORTHO05D007917 6.9e-12 76.3 224 26.3
QL07p044018 Quercus lobata HOM05D006384 ORTHO05D007917 1.2e-11 75.5 245 27.3
HPP92_025998 Vanilla planifolia HOM05D006384 ORTHO05D007917 1.2e-11 75.5 226 30.5
Lsat_1_v5_gn_1_52961 Lactuca sativa HOM05D006384 ORTHO05D007917 2.6e-11 74.3 222 26.1
vmacro07280 Vaccinium macrocarpon HOM05D006384 ORTHO05D007917 2.6e-11 74.3 71 47.9
THA.LOC104806487 Tarenaya hassleriana HOM05D006384 ORTHO05D007917 7.6e-11 72.8 222 25.2
Nitab4.5_0000754g0290 Nicotiana tabacum HOM05D006384 ORTHO05D007917 2.2e-10 71.2 243 25.5
CANSAT80G0575 Cannabis sativa HOM05D006384 ORTHO05D007917 3.8e-10 70.5 222 25.2
CSS0008908 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 4.9e-10 70.1 62 48.4
CSS0018803 Camellia sinensis var. sinensis HOM05D006384 ORTHO05D007917 4.9e-10 70.1 62 48.4
Nitab4.5_0002130g0050 Nicotiana tabacum HOM05D006384 ORTHO05D007917 4.9e-10 70.1 243 25.1
Atru.chr8.1840 Acer truncatum HOM05D006384 ORTHO05D007917 2.4e-09 67.8 222 25.7
Sc20g0001670 Simmondsia chinensis HOM05D006384 ORTHO05D007917 9.3e-09 65.9 148 29.7
Ciclev10013192m.g Citrus clementina HOM05D006384 ORTHO05D007917 1.6e-08 65.1 76 40.8
Dinv37301 Davidia involucrata HOM05D006384 ORTHO05D007917 1.3e-07 62.0 222 25.2
SMO197G0035 Selaginella moellendorffii HOM05D006384 ORTHO05D007917 1.5e-06 58.5 206 28.2


User provided reference genes

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