Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa026088 Carpinus fangiana HOM05D000211 ORTHO05D002682 0.0e+00 1108.6 571 100.0
BraA03t10657Z Brassica rapa HOM05D000211 ORTHO05D002682 1.3e-26 125.6 666 25.1
Dinv13488 Davidia involucrata HOM05D000211 ORTHO05D002682 1.4e-25 122.1 635 26.0
C03p15800 Brassica napus HOM05D000211 ORTHO05D002682 3.1e-25 120.9 664 26.1
BolC3t14011H Brassica oleracea HOM05D000211 ORTHO05D002682 4.1e-25 120.6 664 26.4
A03p13510 Brassica napus HOM05D000211 ORTHO05D002682 1.2e-24 119.0 670 22.4
unitig_52.g17523 Utricularia gibba HOM05D000211 ORTHO05D002682 7.6e-24 116.3 628 22.9
C09p47860 Brassica napus HOM05D000211 ORTHO05D002682 2.9e-23 114.4 660 23.0
BolC9t57624H Brassica oleracea HOM05D000211 ORTHO05D002682 3.8e-23 114.0 658 22.9
MD11G1001700 Malus domestica HOM05D000211 ORTHO05D002682 3.2e-22 110.9 643 21.9
Pp3c22_18260 Physcomitrium patens HOM05D000211 ORTHO05D002682 7.9e-21 106.3 588 23.0
Nn3g18641 Nelumbo nucifera HOM05D000211 ORTHO05D002682 1.0e-20 105.9 613 22.5
Peaxi162Scf00745g00321 Petunia axillaris HOM05D000211 ORTHO05D002682 1.3e-20 105.5 547 25.8
A10p13680 Brassica napus HOM05D000211 ORTHO05D002682 3.0e-20 104.4 665 23.2
BraA10t43467Z Brassica rapa HOM05D000211 ORTHO05D002682 3.9e-20 104.0 665 25.3
Oeu060906.1 Olea europaea HOM05D000211 ORTHO05D002682 3.9e-20 104.0 651 25.7
AT5G56360 Arabidopsis thaliana HOM05D000211 ORTHO05D002682 5.7e-19 100.1 659 24.0
AUR62012168 Chenopodium quinoa HOM05D000211 ORTHO05D002682 7.4e-19 99.8 632 24.5
Eucgr.J01751 Eucalyptus grandis HOM05D000211 ORTHO05D002682 7.4e-19 99.8 635 22.7
MD03G1001800 Malus domestica HOM05D000211 ORTHO05D002682 7.4e-19 99.8 654 23.4
Oeu023969.1 Olea europaea HOM05D000211 ORTHO05D002682 7.4e-19 99.8 624 21.5
Gohir.D13G215200 Gossypium hirsutum HOM05D000211 ORTHO05D002682 9.7e-19 99.4 563 22.2
Sc06g0004170 Simmondsia chinensis HOM05D000211 ORTHO05D002682 2.2e-18 98.2 626 24.8
MBI19_g09314_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002682 2.8e-18 97.8 621 23.8
FAN16G2463 Fragaria x ananassa HOM05D000211 ORTHO05D002682 4.8e-18 97.1 659 21.1
Ah.16g102820 Amaranthus hybridus HOM05D000211 ORTHO05D002682 8.2e-18 96.3 643 20.4
FAN11G1410 Fragaria x ananassa HOM05D000211 ORTHO05D002682 8.2e-18 96.3 661 21.0
QL01p007953 Quercus lobata HOM05D000211 ORTHO05D002682 1.1e-17 95.9 659 22.6
FAN25G3011 Fragaria x ananassa HOM05D000211 ORTHO05D002682 1.4e-17 95.5 661 21.0
HanXRQChr07g0186541 Helianthus annuus HOM05D000211 ORTHO05D002682 1.4e-17 95.5 619 24.7
Gorai.013G245500 Gossypium raimondii HOM05D000211 ORTHO05D002682 1.8e-17 95.1 611 21.8
TWI34G0611 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 1.8e-17 95.1 571 22.2
COL.COLO4_35073 Corchorus olitorius HOM05D000211 ORTHO05D002682 3.1e-17 94.4 624 25.0
FvH4_3g45911 Fragaria vesca HOM05D000211 ORTHO05D002682 4.1e-17 94.0 661 21.2
AUR62022805 Chenopodium quinoa HOM05D000211 ORTHO05D002682 5.3e-17 93.6 631 21.2
Sp6g18190 Schrenkiella parvula HOM05D000211 ORTHO05D002682 6.9e-17 93.2 652 21.9
THA.LOC104813476 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 6.9e-17 93.2 665 22.6
Nitab4.5_0004741g0050 Nicotiana tabacum HOM05D000211 ORTHO05D002682 9.1e-17 92.8 633 24.0
Eucgr.B03587 Eucalyptus grandis HOM05D000211 ORTHO05D002682 1.2e-16 92.4 671 20.9
Sopen12g034320 Solanum pennellii HOM05D000211 ORTHO05D002682 1.2e-16 92.4 651 23.3
Hund16025 Selenicereus undatus HOM05D000211 ORTHO05D002682 1.5e-16 92.0 619 21.6
CARHR269800 Cardamine hirsuta HOM05D000211 ORTHO05D002682 2.0e-16 91.7 270 26.7
Dinv03796 Davidia involucrata HOM05D000211 ORTHO05D002682 2.0e-16 91.7 642 20.6
PGSC0003DMG400004640 Solanum tuberosum HOM05D000211 ORTHO05D002682 2.0e-16 91.7 627 23.4
Cfa009535 Carpinus fangiana HOM05D000211 ORTHO05D002682 2.6e-16 91.3 587 22.3
Mapoly0057s0106 Marchantia polymorpha HOM05D000211 ORTHO05D002682 3.4e-16 90.9 583 22.8
CAN.G484.26 Capsicum annuum HOM05D000211 ORTHO05D002682 5.9e-16 90.1 599 23.5
ECA233G3904 Erigeron canadensis HOM05D000211 ORTHO05D002682 5.9e-16 90.1 600 22.0
Solyc12g099660.2 Solanum lycopersicum HOM05D000211 ORTHO05D002682 7.7e-16 89.7 653 22.7
AagrBONN_evm.TU.Sc2ySwM_344.2520 Anthoceros agrestis HOM05D000211 ORTHO05D002682 1.0e-15 89.4 626 22.8
Carub.0008s1671 Capsella rubella HOM05D000211 ORTHO05D002682 1.3e-15 89.0 659 23.7
Duzib150G0667 Durio zibethinus HOM05D000211 ORTHO05D002682 1.3e-15 89.0 687 23.0
Thhalv10012928m.g Eutrema salsugineum HOM05D000211 ORTHO05D002682 1.3e-15 89.0 662 22.1
GSVIVG01025503001 Vitis vinifera HOM05D000211 ORTHO05D002682 1.3e-15 89.0 659 20.5
CsaV3_4G017580 Cucumis sativus L. HOM05D000211 ORTHO05D002682 1.7e-15 88.6 653 22.1
Medtr4g083360 Medicago truncatula HOM05D000211 ORTHO05D002682 3.8e-15 87.4 665 23.8
RcHm_v2.0_Chr5g0084021 Rosa chinensis HOM05D000211 ORTHO05D002682 3.8e-15 87.4 666 20.6
Aa31LG3G12270 Aethionema arabicum HOM05D000211 ORTHO05D002682 5.0e-15 87.0 640 23.1
MELO3C014731.2 Cucumis melo HOM05D000211 ORTHO05D002682 5.0e-15 87.0 660 21.5
Lj4g0015151 Lotus japonicus HOM05D000211 ORTHO05D002682 5.0e-15 87.0 650 21.4
Os01g0276800 Oryza sativa ssp. japonica HOM05D000211 ORTHO05D002682 6.5e-15 86.7 669 24.2
BcaC01g06420 Brassica carinata HOM05D000211 ORTHO05D002682 8.5e-15 86.3 666 22.4
Gohir.A13G211300 Gossypium hirsutum HOM05D000211 ORTHO05D002682 8.5e-15 86.3 632 23.1
Lsat_1_v5_gn_6_56060 Lactuca sativa HOM05D000211 ORTHO05D002682 1.1e-14 85.9 610 23.1
Sed0010489 Sechium edule HOM05D000211 ORTHO05D002682 1.1e-14 85.9 682 24.9
AL8G32010 Arabidopsis lyrata HOM05D000211 ORTHO05D002682 1.4e-14 85.5 666 22.8
Sabra13G0053500 Salix brachista HOM05D000211 ORTHO05D002682 1.4e-14 85.5 648 24.4
Zm00001eb128910 Zea mays HOM05D000211 ORTHO05D002682 1.4e-14 85.5 190 28.4
THA.LOC104811714 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 1.9e-14 85.1 662 23.6
Thecc.09G197900 Theobroma cacao HOM05D000211 ORTHO05D002682 1.9e-14 85.1 671 24.4
CiPaw.13G179000 Carya illinoinensis HOM05D000211 ORTHO05D002682 2.5e-14 84.7 628 20.9
Psat7g133280 Pisum sativum HOM05D000211 ORTHO05D002682 3.2e-14 84.3 675 22.4
TWI60G0518 Tripterygium wilfordii HOM05D000211 ORTHO05D002682 5.5e-14 83.6 666 20.1
BcaB01g04396 Brassica carinata HOM05D000211 ORTHO05D002682 7.2e-14 83.2 665 22.1
CANSAT11G1344 Cannabis sativa HOM05D000211 ORTHO05D002682 7.2e-14 83.2 670 21.9
Potri.003G223000 Populus trichocarpa HOM05D000211 ORTHO05D002682 7.2e-14 83.2 615 22.0
SGA_v2.0_scaffold6G03328 Striga asiatica HOM05D000211 ORTHO05D002682 7.2e-14 83.2 629 24.0
Aqoxy6G00336 Aquilegia oxysepala HOM05D000211 ORTHO05D002682 9.4e-14 82.8 190 26.3
ClCG02G024450 Citrullus lanatus HOM05D000211 ORTHO05D002682 1.2e-13 82.4 259 25.5
Lalb_Chr16g0385411 Lupinus albus HOM05D000211 ORTHO05D002682 1.2e-13 82.4 666 23.3
PSO384G4567 Papaver somniferum HOM05D000211 ORTHO05D002682 1.2e-13 82.4 190 27.4
Prupe.6G001700 Prunus persica HOM05D000211 ORTHO05D002682 1.2e-13 82.4 606 21.8
Atru.chr3.2061 Acer truncatum HOM05D000211 ORTHO05D002682 1.6e-13 82.0 676 20.3
MBI13_g37424_MAGBIO Magnolia biondii HOM05D000211 ORTHO05D002682 1.6e-13 82.0 674 23.4
PSO339G3993 Papaver somniferum HOM05D000211 ORTHO05D002682 2.1e-13 81.6 615 21.6
SMO133G0027 Selaginella moellendorffii HOM05D000211 ORTHO05D002682 2.1e-13 81.6 152 31.6
Glyma.07G224600 Glycine max HOM05D000211 ORTHO05D002682 2.7e-13 81.3 657 23.6
Gohir.D08G024800 Gossypium hirsutum HOM05D000211 ORTHO05D002682 2.7e-13 81.3 677 25.1
Nitab4.5_0004438g0080 Nicotiana tabacum HOM05D000211 ORTHO05D002682 2.7e-13 81.3 627 20.9
TPR.G34020 Trifolium pratense HOM05D000211 ORTHO05D002682 2.7e-13 81.3 309 26.2
CDE04G2707 Ceratophyllum demersum HOM05D000211 ORTHO05D002682 3.6e-13 80.9 644 21.6
Gorai.004G020200 Gossypium raimondii HOM05D000211 ORTHO05D002682 3.6e-13 80.9 677 25.1
HPP92_014369 Vanilla planifolia HOM05D000211 ORTHO05D002682 3.6e-13 80.9 190 28.9
Gohir.A08G014300 Gossypium hirsutum HOM05D000211 ORTHO05D002682 4.6e-13 80.5 676 24.0
PGR119G2498 Punica granatum HOM05D000211 ORTHO05D002682 4.6e-13 80.5 252 25.0
Cre17.g725350 Chlamydomonas reinhardtii HOM05D000211 ORTHO05D002682 1.0e-12 79.3 185 29.7
Nn4g24948 Nelumbo nucifera HOM05D000211 ORTHO05D002682 1.0e-12 79.3 247 25.1
arahy.Tifrunner.gnm1.ann1.NBIC4D Arachis hypogaea HOM05D000211 ORTHO05D002682 1.8e-12 78.6 649 23.3
Thecc.05G254600 Theobroma cacao HOM05D000211 ORTHO05D002682 2.3e-12 78.2 587 21.3
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 3.0e-12 77.8 635 23.6
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 3.9e-12 77.4 638 21.5
Zm00001eb332690 Zea mays HOM05D000211 ORTHO05D002682 3.9e-12 77.4 648 20.8
MSTRG.12804 Avicennia marina HOM05D000211 ORTHO05D002682 5.1e-12 77.0 656 22.4
Phvul.002G101100 Phaseolus vulgaris HOM05D000211 ORTHO05D002682 5.1e-12 77.0 664 20.0
SalBow3G3948 Salvia bowleyana HOM05D000211 ORTHO05D002682 5.1e-12 77.0 595 21.3
Manes.16G035100 Manihot esculenta HOM05D000211 ORTHO05D002682 6.7e-12 76.6 210 24.3
PGR102G3379 Punica granatum HOM05D000211 ORTHO05D002682 8.8e-12 76.3 188 25.0
arahy.Tifrunner.gnm1.ann1.GBZS02 Arachis hypogaea HOM05D000211 ORTHO05D002682 1.1e-11 75.9 646 21.8
Manes.17G052400 Manihot esculenta HOM05D000211 ORTHO05D002682 1.1e-11 75.9 334 24.0
ECA238G0311 Erigeron canadensis HOM05D000211 ORTHO05D002682 1.5e-11 75.5 663 20.5
vmacro04275 Vaccinium macrocarpon HOM05D000211 ORTHO05D002682 1.5e-11 75.5 210 25.2
Sabra03G0165900 Salix brachista HOM05D000211 ORTHO05D002682 4.4e-11 73.9 630 22.7
Ciclev10014526m.g Citrus clementina HOM05D000211 ORTHO05D002682 5.7e-11 73.6 683 19.9
SEGI_17374 Sequoiadendron giganteum HOM05D000211 ORTHO05D002682 7.4e-11 73.2 153 26.1
SGA_v2.0_scaffold3G01698 Striga asiatica HOM05D000211 ORTHO05D002682 7.4e-11 73.2 196 26.0
Lalb_Chr05g0219841 Lupinus albus HOM05D000211 ORTHO05D002682 9.7e-11 72.8 647 22.1
COL.COLO4_36028 Corchorus olitorius HOM05D000211 ORTHO05D002682 1.7e-10 72.0 125 31.2
Migut.N00534 Erythranthe guttata HOM05D000211 ORTHO05D002682 1.7e-10 72.0 633 24.3
Glyma.20G024500 Glycine max HOM05D000211 ORTHO05D002682 1.7e-10 72.0 663 23.1
EL10Ac2g04664 Beta vulgaris HOM05D000211 ORTHO05D002682 2.8e-10 71.2 154 31.2
Nitab4.5_0002196g0040 Nicotiana tabacum HOM05D000211 ORTHO05D002682 2.8e-10 71.2 146 35.6
TPR.G34038 Trifolium pratense HOM05D000211 ORTHO05D002682 2.8e-10 71.2 185 28.6
HanXRQChr14g0437141 Helianthus annuus HOM05D000211 ORTHO05D002682 3.7e-10 70.9 665 20.6
Lsat_1_v5_gn_2_50861 Lactuca sativa HOM05D000211 ORTHO05D002682 1.1e-09 69.3 588 21.1
Nitab4.5_0002741g0040 Nicotiana tabacum HOM05D000211 ORTHO05D002682 1.4e-09 68.9 531 24.1
Potri.001G001700 Populus trichocarpa HOM05D000211 ORTHO05D002682 1.4e-09 68.9 201 28.4
Gohir.A13G101215 Gossypium hirsutum HOM05D000211 ORTHO05D002682 1.8e-09 68.6 143 28.0
TAR633G1501 Trochodendron aralioides HOM05D000211 ORTHO05D002682 1.8e-09 68.6 635 18.9
CDE02G3536 Ceratophyllum demersum HOM05D000211 ORTHO05D002682 3.1e-09 67.8 150 27.3
Haze_22924 Corylus avellana HOM05D000211 ORTHO05D002682 3.1e-09 67.8 715 19.9
Duzib106G1428 Durio zibethinus HOM05D000211 ORTHO05D002682 3.1e-09 67.8 547 19.6
Cpa.g.sc119.26 Carica papaya HOM05D000211 ORTHO05D002682 4.1e-09 67.4 149 29.5
Peaxi162Scf00086g00328 Petunia axillaris HOM05D000211 ORTHO05D002682 4.1e-09 67.4 119 28.6
Potri.013G060332 Populus trichocarpa HOM05D000211 ORTHO05D002682 4.1e-09 67.4 159 28.3
Nitab4.5_0000570g0080 Nicotiana tabacum HOM05D000211 ORTHO05D002682 6.9e-09 66.6 654 22.5
arahy.Tifrunner.gnm1.ann1.GTVL13 Arachis hypogaea HOM05D000211 ORTHO05D002682 1.2e-08 65.9 155 34.2
Glyma.06G285000 Glycine max HOM05D000211 ORTHO05D002682 1.2e-08 65.9 156 29.5
Glyma.12G120800 Glycine max HOM05D000211 ORTHO05D002682 1.2e-08 65.9 156 29.5
MCO06G050 Micromonas commoda HOM05D000211 ORTHO05D002682 1.5e-08 65.5 190 28.9
Psat7g166680 Pisum sativum HOM05D000211 ORTHO05D002682 1.5e-08 65.5 152 31.6
Eucgr.K01083 Eucalyptus grandis HOM05D000211 ORTHO05D002682 2.0e-08 65.1 172 30.8
TAR636G1134 Trochodendron aralioides HOM05D000211 ORTHO05D002682 3.4e-08 64.3 183 29.5
EL10Ac8g19625 Beta vulgaris HOM05D000211 ORTHO05D002682 4.5e-08 63.9 110 34.5
CBR_g20370 Chara braunii HOM05D000019 ORTHO05D000353 4.5e-08 63.9 84 44.0
Ca_18790_v3 Cicer arietinum L. HOM05D000211 ORTHO05D002682 4.5e-08 63.9 185 27.6
Lj3g0007969 Lotus japonicus HOM05D000211 ORTHO05D002682 4.5e-08 63.9 175 29.7
Eucgr.A02946 Eucalyptus grandis HOM05D000211 ORTHO05D002682 5.9e-08 63.5 129 31.8
Hma1.2p1_0968F.1_g242450 Hydrangea macrophylla HOM05D000211 ORTHO05D002682 7.7e-08 63.2 176 29.5
Medtr4g079430 Medicago truncatula HOM05D000211 ORTHO05D002682 7.7e-08 63.2 166 30.7
Rhsim13G0234500 Rhododendron simsii HOM05D000211 ORTHO05D002682 7.7e-08 63.2 71 45.1
arahy.Tifrunner.gnm1.ann1.45LUS5 Arachis hypogaea HOM05D000211 ORTHO05D002682 1.0e-07 62.8 155 33.5
SGA_v2.0_scaffold21G09353 Striga asiatica HOM05D000211 ORTHO05D002682 1.3e-07 62.4 125 35.2
Lj8A105T41 Lonicera japonica HOM05D000211 ORTHO05D002682 1.7e-07 62.0 215 29.3
DCAR_023822 Daucus carota HOM05D000211 ORTHO05D002682 2.9e-07 61.2 598 24.1
Phvul.011G116600 Phaseolus vulgaris HOM05D000211 ORTHO05D002682 2.9e-07 61.2 151 30.5
Hund00955 Selenicereus undatus HOM05D000211 ORTHO05D002682 2.9e-07 61.2 110 36.4
Manes.13G139800 Manihot esculenta HOM05D000211 ORTHO05D002682 3.8e-07 60.8 145 31.7
DCAR_010696 Daucus carota HOM05D000211 ORTHO05D002682 5.0e-07 60.5 157 33.8
TPR.G20763 Trifolium pratense HOM05D000211 ORTHO05D002682 5.0e-07 60.5 183 30.1
BcaC04g20099 Brassica carinata HOM05D000211 ORTHO05D002682 6.5e-07 60.1 159 25.2
FAN21G3711 Fragaria x ananassa HOM05D000211 ORTHO05D002682 6.5e-07 60.1 202 26.7
Potri.013G060266 Populus trichocarpa HOM05D000211 ORTHO05D002682 8.5e-07 59.7 153 31.4
Sed0019986 Sechium edule HOM05D000211 ORTHO05D002682 1.1e-06 59.3 179 27.4
Cc01_g00300 Coffea canephora HOM05D000211 ORTHO05D002682 1.4e-06 58.9 164 29.3
Pp3c22_9580 Physcomitrium patens HOM05D000211 ORTHO05D002682 1.9e-06 58.5 110 31.8
HPP92_020201 Vanilla planifolia HOM05D000211 ORTHO05D002682 2.5e-06 58.2 151 30.5
CDE02G4587 Ceratophyllum demersum HOM05D000211 ORTHO05D002682 3.2e-06 57.8 182 28.0
SEGI_02170 Sequoiadendron giganteum HOM05D000211 ORTHO05D002682 4.2e-06 57.4 191 28.8
THA.LOC104802850 Tarenaya hassleriana HOM05D000211 ORTHO05D002682 4.2e-06 57.4 133 33.8
BcaC04g20098 Brassica carinata HOM05D000211 ORTHO05D002682 9.4e-06 56.2 184 26.1
Sp4g24540 Schrenkiella parvula HOM05D000211 ORTHO05D002682 9.4e-06 56.2 99 33.3


User provided reference genes

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